avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Rarg | mm10_v2_chr15_-_102246439_102246510 | 0.20 | 2.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr17_+_29114142 Show fit | 3.26 |
ENSMUST00000141797.1
ENSMUST00000132262.1 ENSMUST00000141239.1 ENSMUST00000138816.1 |
predicted gene 16194 |
|
chr9_+_21029373 Show fit | 2.30 |
ENSMUST00000001040.5
|
intercellular adhesion molecule 4, Landsteiner-Wiener blood group |
|
chrX_-_7967817 Show fit | 2.09 |
ENSMUST00000033502.7
|
GATA binding protein 1 |
|
chr14_-_70630149 Show fit | 1.98 |
ENSMUST00000022694.9
|
dematin actin binding protein |
|
chr9_-_44288535 Show fit | 1.95 |
ENSMUST00000161354.1
|
ATP-binding cassette, sub-family G (WHITE), member 4 |
|
chr9_+_111019284 Show fit | 1.94 |
ENSMUST00000035077.3
|
lactotransferrin |
|
chr11_+_58640394 Show fit | 1.82 |
ENSMUST00000075084.4
|
tripartite motif-containing 58 |
|
chr7_-_142656018 Show fit | 1.81 |
ENSMUST00000178921.1
|
insulin-like growth factor 2 |
|
chr11_-_117782182 Show fit | 1.77 |
ENSMUST00000152304.1
|
transmembrane channel-like gene family 6 |
|
chr16_-_16863975 Show fit | 1.76 |
ENSMUST00000100136.3
|
immunoglobulin lambda-like polypeptide 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.3 | GO:0006910 | phagocytosis, recognition(GO:0006910) |
0.2 | 3.9 | GO:0032460 | negative regulation of protein oligomerization(GO:0032460) |
0.1 | 3.8 | GO:0048821 | erythrocyte development(GO:0048821) |
1.1 | 3.2 | GO:0035585 | calcium-mediated signaling using extracellular calcium source(GO:0035585) |
0.2 | 2.7 | GO:0006977 | DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest(GO:0006977) |
0.0 | 2.4 | GO:0033344 | cholesterol efflux(GO:0033344) |
0.6 | 2.3 | GO:0035524 | proline transmembrane transport(GO:0035524) |
0.7 | 2.2 | GO:0015811 | L-cystine transport(GO:0015811) |
0.7 | 2.1 | GO:0030221 | basophil differentiation(GO:0030221) |
0.3 | 2.1 | GO:0006735 | NADH regeneration(GO:0006735) canonical glycolysis(GO:0061621) glucose catabolic process to pyruvate(GO:0061718) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 5.3 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.0 | 3.5 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
0.8 | 3.2 | GO:0031095 | platelet dense tubular network membrane(GO:0031095) |
0.1 | 2.8 | GO:0014731 | spectrin-associated cytoskeleton(GO:0014731) |
0.1 | 2.1 | GO:0097228 | sperm principal piece(GO:0097228) |
0.5 | 1.9 | GO:0044279 | other organism cell membrane(GO:0044218) other organism membrane(GO:0044279) |
0.0 | 1.8 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.1 | 1.7 | GO:0005751 | mitochondrial respiratory chain complex IV(GO:0005751) |
0.0 | 1.7 | GO:0031526 | brush border membrane(GO:0031526) |
0.0 | 1.4 | GO:0097610 | cleavage furrow(GO:0032154) cell surface furrow(GO:0097610) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 5.3 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.1 | 3.6 | GO:0043539 | protein serine/threonine kinase activator activity(GO:0043539) |
0.1 | 3.4 | GO:0030507 | spectrin binding(GO:0030507) |
0.8 | 3.1 | GO:0034041 | sterol-transporting ATPase activity(GO:0034041) |
0.3 | 3.0 | GO:0008093 | cytoskeletal adaptor activity(GO:0008093) |
0.0 | 2.4 | GO:0005178 | integrin binding(GO:0005178) |
0.2 | 2.3 | GO:0015193 | L-proline transmembrane transporter activity(GO:0015193) |
0.7 | 2.2 | GO:0015184 | L-cystine transmembrane transporter activity(GO:0015184) |
0.2 | 2.1 | GO:0008865 | fructokinase activity(GO:0008865) mannokinase activity(GO:0019158) |
0.1 | 2.1 | GO:0008301 | DNA binding, bending(GO:0008301) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.6 | PID P73PATHWAY | p73 transcription factor network |
0.0 | 2.6 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.0 | 2.2 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
0.0 | 1.9 | PID ATR PATHWAY | ATR signaling pathway |
0.0 | 1.8 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.0 | 1.2 | SA CASPASE CASCADE | Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade. |
0.0 | 1.2 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.0 | 1.1 | PID IL27 PATHWAY | IL27-mediated signaling events |
0.0 | 1.1 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.0 | 1.0 | SA TRKA RECEPTOR | The TrkA receptor binds nerve growth factor to activate MAP kinase pathways and promote cell growth. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.2 | REACTOME GLUCOSE TRANSPORT | Genes involved in Glucose transport |
0.1 | 3.1 | REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS | Genes involved in ABCA transporters in lipid homeostasis |
0.1 | 3.0 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.0 | 2.9 | REACTOME AMYLOIDS | Genes involved in Amyloids |
0.1 | 2.1 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |
0.1 | 2.0 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
0.1 | 1.9 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.0 | 1.8 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.1 | 1.7 | REACTOME ABC FAMILY PROTEINS MEDIATED TRANSPORT | Genes involved in ABC-family proteins mediated transport |
0.0 | 1.6 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |