avrg: GSE58827: Dynamics of the Mouse Liver
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSMUSG00000024927.7 | v-rel reticuloendotheliosis viral oncogene homolog A (avian) | |
ENSMUSG00000020275.8 | reticuloendotheliosis oncogene | |
ENSMUSG00000028163.11 | nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Rel | mm10_v2_chr11_-_23770953_23771028 | 0.47 | 3.9e-03 | Click! |
Nfkb1 | mm10_v2_chr3_-_135691512_135691564 | 0.41 | 1.3e-02 | Click! |
Rela | mm10_v2_chr19_+_5637475_5637486 | 0.21 | 2.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_+_90891234 Show fit | 4.37 |
ENSMUST00000031327.8
|
chemokine (C-X-C motif) ligand 1 |
|
chr17_+_37193889 Show fit | 3.33 |
ENSMUST00000038844.6
|
ubiquitin D |
|
chr1_+_74791516 Show fit | 2.88 |
ENSMUST00000006718.8
|
wingless related MMTV integration site 10a |
|
chr11_-_82179808 Show fit | 1.94 |
ENSMUST00000108189.2
ENSMUST00000021043.4 |
chemokine (C-C motif) ligand 1 |
|
chr15_-_78495059 Show fit | 1.74 |
ENSMUST00000089398.1
|
interleukin 2 receptor, beta chain |
|
chr12_+_111166485 Show fit | 1.64 |
ENSMUST00000139162.1
|
TNF receptor-associated factor 3 |
|
chr11_-_83530505 Show fit | 1.57 |
ENSMUST00000035938.2
|
chemokine (C-C motif) ligand 5 |
|
chr14_-_45529964 Show fit | 1.52 |
ENSMUST00000150660.1
|
fermitin family homolog 2 (Drosophila) |
|
chr7_+_26061495 Show fit | 1.42 |
ENSMUST00000005669.7
|
cytochrome P450, family 2, subfamily b, polypeptide 13 |
|
chr5_-_92348871 Show fit | 1.39 |
ENSMUST00000038816.6
ENSMUST00000118006.1 |
chemokine (C-X-C motif) ligand 10 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.5 | 4.4 | GO:0070947 | neutrophil mediated killing of fungus(GO:0070947) |
0.3 | 3.5 | GO:0008063 | Toll signaling pathway(GO:0008063) |
0.2 | 3.3 | GO:0070842 | aggresome assembly(GO:0070842) |
0.2 | 2.7 | GO:0048733 | sebaceous gland development(GO:0048733) |
0.1 | 2.0 | GO:0060396 | growth hormone receptor signaling pathway(GO:0060396) cellular response to growth hormone stimulus(GO:0071378) |
0.1 | 2.0 | GO:0033622 | integrin activation(GO:0033622) |
0.5 | 1.8 | GO:0003365 | establishment of cell polarity involved in ameboidal cell migration(GO:0003365) |
0.4 | 1.8 | GO:1901509 | regulation of endothelial tube morphogenesis(GO:1901509) |
0.1 | 1.7 | GO:0090026 | positive regulation of monocyte chemotaxis(GO:0090026) |
0.1 | 1.7 | GO:0019373 | epoxygenase P450 pathway(GO:0019373) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.4 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.0 | 4.8 | GO:0005578 | proteinaceous extracellular matrix(GO:0005578) |
0.1 | 3.5 | GO:0016235 | aggresome(GO:0016235) |
0.2 | 3.4 | GO:0035631 | CD40 receptor complex(GO:0035631) |
0.2 | 2.4 | GO:0042613 | MHC class II protein complex(GO:0042613) |
0.0 | 2.3 | GO:0002102 | podosome(GO:0002102) |
0.0 | 2.3 | GO:0031941 | filamentous actin(GO:0031941) |
0.2 | 1.9 | GO:0033256 | I-kappaB/NF-kappaB complex(GO:0033256) |
0.0 | 1.7 | GO:0008180 | COP9 signalosome(GO:0008180) |
0.1 | 1.2 | GO:0042567 | insulin-like growth factor ternary complex(GO:0042567) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 5.5 | GO:0045236 | CXCR chemokine receptor binding(GO:0045236) |
0.1 | 4.5 | GO:0005109 | frizzled binding(GO:0005109) |
0.2 | 3.6 | GO:0031996 | thioesterase binding(GO:0031996) |
0.1 | 3.1 | GO:0070628 | proteasome binding(GO:0070628) |
0.0 | 2.2 | GO:0051015 | actin filament binding(GO:0051015) |
0.4 | 2.0 | GO:0008269 | JAK pathway signal transduction adaptor activity(GO:0008269) |
0.0 | 2.0 | GO:0005547 | phosphatidylinositol-3,4,5-trisphosphate binding(GO:0005547) |
0.0 | 1.9 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.6 | 1.7 | GO:0004911 | interleukin-2 receptor activity(GO:0004911) |
0.1 | 1.7 | GO:0008009 | chemokine activity(GO:0008009) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.3 | PID IL23 PATHWAY | IL23-mediated signaling events |
0.1 | 4.6 | PID CD40 PATHWAY | CD40/CD40L signaling |
0.1 | 3.8 | PID IL2 1PATHWAY | IL2-mediated signaling events |
0.0 | 3.2 | WNT SIGNALING | Genes related to Wnt-mediated signal transduction |
0.0 | 1.4 | PID REG GR PATHWAY | Glucocorticoid receptor regulatory network |
0.0 | 1.3 | PID SYNDECAN 4 PATHWAY | Syndecan-4-mediated signaling events |
0.1 | 1.1 | PID NFKAPPAB ATYPICAL PATHWAY | Atypical NF-kappaB pathway |
0.0 | 1.0 | PID RET PATHWAY | Signaling events regulated by Ret tyrosine kinase |
0.0 | 1.0 | PID P53 DOWNSTREAM PATHWAY | Direct p53 effectors |
0.1 | 0.9 | PID IL27 PATHWAY | IL27-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 8.3 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |
0.2 | 3.6 | REACTOME ACTIVATION OF IRF3 IRF7 MEDIATED BY TBK1 IKK EPSILON | Genes involved in Activation of IRF3/IRF7 mediated by TBK1/IKK epsilon |
0.0 | 3.2 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |
0.1 | 2.4 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.1 | 2.1 | REACTOME GROWTH HORMONE RECEPTOR SIGNALING | Genes involved in Growth hormone receptor signaling |
0.0 | 2.1 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.1 | 1.8 | REACTOME IL 7 SIGNALING | Genes involved in Interleukin-7 signaling |
0.1 | 1.8 | REACTOME SIGNALING BY HIPPO | Genes involved in Signaling by Hippo |
0.1 | 1.7 | REACTOME IL RECEPTOR SHC SIGNALING | Genes involved in Interleukin receptor SHC signaling |
0.0 | 1.6 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |