avrg: GSE58827: Dynamics of the Mouse Liver
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSMUSG00000040929.10 | regulatory factor X, 3 (influences HLA class II expression) | |
ENSMUSG00000031706.6 | regulatory factor X, 1 (influences HLA class II expression) | |
ENSMUSG00000020037.9 | regulatory factor X, 4 (influences HLA class II expression) |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Rfx4 | mm10_v2_chr10_+_84756055_84756084 | -0.44 | 7.1e-03 | Click! |
Rfx1 | mm10_v2_chr8_+_84066824_84066882 | 0.37 | 2.8e-02 | Click! |
Rfx3 | mm10_v2_chr19_-_28010995_28011054 | 0.07 | 6.7e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 5.8 | GO:0044458 | motile cilium assembly(GO:0044458) |
0.2 | 2.1 | GO:0002432 | granuloma formation(GO:0002432) |
0.1 | 2.0 | GO:0040034 | regulation of development, heterochronic(GO:0040034) |
0.1 | 1.9 | GO:0050774 | negative regulation of dendrite morphogenesis(GO:0050774) |
0.0 | 1.7 | GO:0021591 | ventricular system development(GO:0021591) |
0.1 | 1.6 | GO:0098953 | receptor diffusion trapping(GO:0098953) postsynaptic neurotransmitter receptor diffusion trapping(GO:0098970) neurotransmitter receptor diffusion trapping(GO:0099628) |
0.1 | 1.6 | GO:0090036 | regulation of protein kinase C signaling(GO:0090036) |
0.3 | 1.4 | GO:1904491 | protein localization to ciliary transition zone(GO:1904491) |
0.1 | 1.4 | GO:0007288 | sperm axoneme assembly(GO:0007288) |
0.1 | 1.4 | GO:0010216 | maintenance of DNA methylation(GO:0010216) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.4 | GO:0031514 | motile cilium(GO:0031514) |
0.0 | 4.0 | GO:0045211 | postsynaptic membrane(GO:0045211) |
0.2 | 3.5 | GO:0036038 | MKS complex(GO:0036038) |
0.4 | 2.1 | GO:1990769 | proximal neuron projection(GO:1990769) |
0.2 | 2.1 | GO:0033093 | Weibel-Palade body(GO:0033093) |
0.1 | 1.9 | GO:0005868 | cytoplasmic dynein complex(GO:0005868) |
0.1 | 1.6 | GO:0036057 | filtration diaphragm(GO:0036056) slit diaphragm(GO:0036057) |
0.4 | 1.5 | GO:0099522 | region of cytosol(GO:0099522) postsynaptic cytosol(GO:0099524) |
0.1 | 1.4 | GO:1904115 | axon cytoplasm(GO:1904115) |
0.1 | 1.3 | GO:0016342 | catenin complex(GO:0016342) lamellipodium membrane(GO:0031258) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 2.3 | GO:0015279 | store-operated calcium channel activity(GO:0015279) |
0.0 | 2.1 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.0 | 2.0 | GO:0005546 | phosphatidylinositol-4,5-bisphosphate binding(GO:0005546) |
0.1 | 1.8 | GO:0030235 | nitric-oxide synthase regulator activity(GO:0030235) |
0.0 | 1.6 | GO:0046875 | ephrin receptor binding(GO:0046875) |
0.1 | 1.5 | GO:0004653 | polypeptide N-acetylgalactosaminyltransferase activity(GO:0004653) |
0.1 | 1.5 | GO:0001618 | virus receptor activity(GO:0001618) |
0.0 | 1.5 | GO:0045182 | translation regulator activity(GO:0045182) |
0.3 | 1.4 | GO:0004127 | cytidylate kinase activity(GO:0004127) |
0.2 | 1.4 | GO:0031493 | nucleosomal histone binding(GO:0031493) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.1 | PID NEPHRIN NEPH1 PATHWAY | Nephrin/Neph1 signaling in the kidney podocyte |
0.1 | 1.5 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
0.0 | 1.3 | PID RAC1 REG PATHWAY | Regulation of RAC1 activity |
0.0 | 1.2 | PID RAC1 PATHWAY | RAC1 signaling pathway |
0.0 | 1.0 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 0.9 | PID MYC PATHWAY | C-MYC pathway |
0.0 | 0.9 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.0 | 0.9 | PID KIT PATHWAY | Signaling events mediated by Stem cell factor receptor (c-Kit) |
0.0 | 0.8 | SA REG CASCADE OF CYCLIN EXPR | Expression of cyclins regulates progression through the cell cycle by activating cyclin-dependent kinases. |
0.0 | 0.8 | PID EPHRINB REV PATHWAY | Ephrin B reverse signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.5 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.2 | 1.6 | REACTOME ELEVATION OF CYTOSOLIC CA2 LEVELS | Genes involved in Elevation of cytosolic Ca2+ levels |
0.1 | 1.6 | REACTOME KINESINS | Genes involved in Kinesins |
0.1 | 1.6 | REACTOME RNA POL III TRANSCRIPTION INITIATION FROM TYPE 2 PROMOTER | Genes involved in RNA Polymerase III Transcription Initiation From Type 2 Promoter |
0.1 | 1.5 | REACTOME CREB PHOSPHORYLATION THROUGH THE ACTIVATION OF CAMKII | Genes involved in CREB phosphorylation through the activation of CaMKII |
0.1 | 1.5 | REACTOME ACTIVATION OF BH3 ONLY PROTEINS | Genes involved in Activation of BH3-only proteins |
0.0 | 1.5 | REACTOME SYNTHESIS OF PA | Genes involved in Synthesis of PA |
0.1 | 1.4 | REACTOME CRMPS IN SEMA3A SIGNALING | Genes involved in CRMPs in Sema3A signaling |
0.0 | 1.3 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.0 | 1.3 | REACTOME 3 UTR MEDIATED TRANSLATIONAL REGULATION | Genes involved in 3' -UTR-mediated translational regulation |