avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Rreb1 | mm10_v2_chr13_+_37778384_37778403 | 0.53 | 8.3e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_-_142576492 Show fit | 5.74 |
ENSMUST00000140716.1
|
H19 fetal liver mRNA |
|
chr16_-_36408349 Show fit | 5.52 |
ENSMUST00000023619.6
|
stefin A2 |
|
chr9_-_109849440 Show fit | 4.19 |
ENSMUST00000112022.2
|
cathelicidin antimicrobial peptide |
|
chr7_-_142578093 Show fit | 3.17 |
ENSMUST00000149974.1
ENSMUST00000152754.1 |
H19 fetal liver mRNA |
|
chr7_-_142578139 Show fit | 3.14 |
ENSMUST00000136359.1
|
H19 fetal liver mRNA |
|
chr5_-_122002340 Show fit | 2.67 |
ENSMUST00000134326.1
|
cut-like homeobox 2 |
|
chr17_+_29135056 Show fit | 2.28 |
ENSMUST00000087942.4
|
RAB44, member RAS oncogene family |
|
chr4_+_44943727 Show fit | 2.04 |
ENSMUST00000154177.1
|
predicted gene 12678 |
|
chr8_+_57455898 Show fit | 1.77 |
ENSMUST00000034023.3
|
scrapie responsive gene 1 |
|
chr14_+_32321987 Show fit | 1.75 |
ENSMUST00000022480.7
|
oxoglutarate dehydrogenase-like |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 12.0 | GO:2000653 | regulation of genetic imprinting(GO:2000653) |
0.3 | 4.3 | GO:0051873 | disruption by host of symbiont cells(GO:0051852) killing by host of symbiont cells(GO:0051873) |
0.0 | 3.2 | GO:0010951 | negative regulation of endopeptidase activity(GO:0010951) |
0.1 | 3.0 | GO:0061003 | positive regulation of dendritic spine morphogenesis(GO:0061003) |
0.0 | 2.7 | GO:0050853 | B cell receptor signaling pathway(GO:0050853) |
0.1 | 2.3 | GO:0099612 | protein localization to axon(GO:0099612) |
0.1 | 2.2 | GO:0051016 | barbed-end actin filament capping(GO:0051016) |
0.1 | 2.1 | GO:1901538 | DNA methylation involved in embryo development(GO:0043045) changes to DNA methylation involved in embryo development(GO:1901538) |
0.1 | 2.0 | GO:0032332 | positive regulation of chondrocyte differentiation(GO:0032332) |
0.2 | 1.7 | GO:0071294 | cellular response to zinc ion(GO:0071294) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.6 | GO:0005844 | polysome(GO:0005844) |
0.0 | 5.3 | GO:0000139 | Golgi membrane(GO:0000139) |
0.3 | 4.2 | GO:0042581 | specific granule(GO:0042581) |
0.5 | 3.4 | GO:0019815 | B cell receptor complex(GO:0019815) |
0.2 | 2.5 | GO:0090543 | Flemming body(GO:0090543) |
0.0 | 2.1 | GO:0005720 | nuclear heterochromatin(GO:0005720) |
0.4 | 1.9 | GO:1990769 | proximal neuron projection(GO:1990769) |
0.2 | 1.8 | GO:0045252 | oxoglutarate dehydrogenase complex(GO:0045252) |
0.4 | 1.5 | GO:0032280 | symmetric synapse(GO:0032280) |
0.1 | 1.5 | GO:0036157 | outer dynein arm(GO:0036157) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.7 | GO:0004869 | cysteine-type endopeptidase inhibitor activity(GO:0004869) |
0.0 | 4.1 | GO:0051015 | actin filament binding(GO:0051015) |
0.0 | 2.8 | GO:0070888 | E-box binding(GO:0070888) |
0.0 | 2.4 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.3 | 1.8 | GO:0004591 | oxoglutarate dehydrogenase (succinyl-transferring) activity(GO:0004591) |
0.3 | 1.7 | GO:0030171 | voltage-gated proton channel activity(GO:0030171) |
0.1 | 1.7 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.2 | 1.5 | GO:0001515 | opioid peptide activity(GO:0001515) |
0.1 | 1.5 | GO:0045504 | dynein heavy chain binding(GO:0045504) |
0.0 | 1.5 | GO:0071889 | 14-3-3 protein binding(GO:0071889) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 4.2 | ST PAC1 RECEPTOR PATHWAY | PAC1 Receptor Pathway |
0.0 | 3.4 | PID BCR 5PATHWAY | BCR signaling pathway |
0.0 | 2.5 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 1.7 | PID LIS1 PATHWAY | Lissencephaly gene (LIS1) in neuronal migration and development |
0.0 | 1.6 | PID IL2 STAT5 PATHWAY | IL2 signaling events mediated by STAT5 |
0.0 | 1.3 | PID AP1 PATHWAY | AP-1 transcription factor network |
0.1 | 1.2 | SIG IL4RECEPTOR IN B LYPHOCYTES | Genes related to IL4 rceptor signaling in B lymphocytes |
0.0 | 1.2 | PID WNT CANONICAL PATHWAY | Canonical Wnt signaling pathway |
0.0 | 1.1 | PID IL27 PATHWAY | IL27-mediated signaling events |
0.0 | 1.0 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.2 | REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS | Genes involved in Latent infection of Homo sapiens with Mycobacterium tuberculosis |
0.1 | 3.2 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |
0.0 | 2.5 | REACTOME G ALPHA I SIGNALLING EVENTS | Genes involved in G alpha (i) signalling events |
0.1 | 1.3 | REACTOME CELL EXTRACELLULAR MATRIX INTERACTIONS | Genes involved in Cell-extracellular matrix interactions |
0.0 | 1.3 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.0 | 1.3 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.1 | 1.2 | REACTOME ORGANIC CATION ANION ZWITTERION TRANSPORT | Genes involved in Organic cation/anion/zwitterion transport |
0.1 | 1.2 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
0.1 | 1.2 | REACTOME SIGNAL ATTENUATION | Genes involved in Signal attenuation |
0.0 | 1.2 | REACTOME G1 PHASE | Genes involved in G1 Phase |