avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Runx3 | mm10_v2_chr4_+_135120640_135120660 | 0.52 | 1.1e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr13_-_23551648 Show fit | 4.23 |
ENSMUST00000102971.1
|
histone cluster 1, H4f |
|
chr11_-_87875524 Show fit | 3.07 |
ENSMUST00000049768.3
|
eosinophil peroxidase |
|
chr15_-_78855517 Show fit | 2.98 |
ENSMUST00000044584.4
|
lectin, galactose-binding, soluble 2 |
|
chr7_-_142095266 Show fit | 2.95 |
ENSMUST00000039926.3
|
dual specificity phosphatase 8 |
|
chr13_-_22041352 Show fit | 2.88 |
ENSMUST00000102977.2
|
histone cluster 1, H4i |
|
chr11_-_100207507 Show fit | 2.75 |
ENSMUST00000007272.7
|
keratin 14 |
|
chr9_-_32928928 Show fit | 2.74 |
ENSMUST00000185169.1
|
RP24-308I2.1 |
|
chr7_+_127091426 Show fit | 2.71 |
ENSMUST00000056288.5
|
expressed sequence AI467606 |
|
chr13_-_23698454 Show fit | 2.18 |
ENSMUST00000102967.1
|
histone cluster 1, H4c |
|
chr2_+_4017727 Show fit | 2.11 |
ENSMUST00000177457.1
|
FERM domain containing 4A |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 13.0 | GO:0045653 | negative regulation of megakaryocyte differentiation(GO:0045653) |
0.1 | 4.8 | GO:0006284 | base-excision repair(GO:0006284) |
1.0 | 3.1 | GO:0002215 | defense response to nematode(GO:0002215) |
0.1 | 3.0 | GO:0000188 | inactivation of MAPK activity(GO:0000188) |
0.4 | 2.8 | GO:0045110 | intermediate filament bundle assembly(GO:0045110) |
0.0 | 2.3 | GO:0015718 | monocarboxylic acid transport(GO:0015718) |
0.0 | 2.1 | GO:0090162 | establishment of epithelial cell polarity(GO:0090162) |
0.5 | 1.9 | GO:1900220 | semaphorin-plexin signaling pathway involved in bone trabecula morphogenesis(GO:1900220) |
0.0 | 1.9 | GO:0002181 | cytoplasmic translation(GO:0002181) |
0.2 | 1.5 | GO:0051409 | response to nitrosative stress(GO:0051409) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 11.3 | GO:0000788 | nuclear nucleosome(GO:0000788) |
0.5 | 4.8 | GO:0035985 | senescence-associated heterochromatin focus(GO:0035985) |
0.1 | 4.0 | GO:0045095 | keratin filament(GO:0045095) |
0.0 | 2.1 | GO:0005923 | bicellular tight junction(GO:0005923) |
0.1 | 1.9 | GO:0042788 | polysomal ribosome(GO:0042788) |
0.0 | 1.7 | GO:0005811 | lipid particle(GO:0005811) |
0.0 | 1.6 | GO:0000786 | nucleosome(GO:0000786) |
0.5 | 1.5 | GO:0017109 | glutamate-cysteine ligase complex(GO:0017109) |
0.0 | 1.3 | GO:0016592 | mediator complex(GO:0016592) |
0.4 | 1.1 | GO:0043625 | delta DNA polymerase complex(GO:0043625) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 13.4 | GO:0042393 | histone binding(GO:0042393) |
0.5 | 4.8 | GO:0051575 | 5'-deoxyribose-5-phosphate lyase activity(GO:0051575) |
0.1 | 3.4 | GO:0008028 | monocarboxylic acid transmembrane transporter activity(GO:0008028) |
0.0 | 3.1 | GO:0004601 | peroxidase activity(GO:0004601) |
0.4 | 3.0 | GO:0016936 | galactoside binding(GO:0016936) |
0.2 | 3.0 | GO:0017017 | MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017) |
0.6 | 2.8 | GO:1990254 | keratin filament binding(GO:1990254) |
0.0 | 2.5 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
0.0 | 1.9 | GO:0030674 | protein binding, bridging(GO:0030674) |
0.1 | 1.7 | GO:0016866 | intramolecular transferase activity(GO:0016866) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.6 | PID IL4 2PATHWAY | IL4-mediated signaling events |
0.0 | 4.2 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 3.0 | PID P38 ALPHA BETA PATHWAY | Regulation of p38-alpha and p38-beta |
0.0 | 2.8 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
0.0 | 1.8 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.0 | 1.5 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.0 | 1.0 | PID INTEGRIN3 PATHWAY | Beta3 integrin cell surface interactions |
0.0 | 0.9 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 0.7 | PID AR NONGENOMIC PATHWAY | Nongenotropic Androgen signaling |
0.0 | 0.5 | PID IL6 7 PATHWAY | IL6-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 11.3 | REACTOME PACKAGING OF TELOMERE ENDS | Genes involved in Packaging Of Telomere Ends |
0.6 | 4.8 | REACTOME APOBEC3G MEDIATED RESISTANCE TO HIV1 INFECTION | Genes involved in APOBEC3G mediated resistance to HIV-1 infection |
0.0 | 2.8 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.1 | 1.9 | REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE | Genes involved in Sema4D induced cell migration and growth-cone collapse |
0.1 | 1.8 | REACTOME CHOLESTEROL BIOSYNTHESIS | Genes involved in Cholesterol biosynthesis |
0.1 | 1.5 | REACTOME SULFUR AMINO ACID METABOLISM | Genes involved in Sulfur amino acid metabolism |
0.1 | 1.4 | REACTOME SYNTHESIS AND INTERCONVERSION OF NUCLEOTIDE DI AND TRIPHOSPHATES | Genes involved in Synthesis and interconversion of nucleotide di- and triphosphates |
0.1 | 1.1 | REACTOME REMOVAL OF THE FLAP INTERMEDIATE FROM THE C STRAND | Genes involved in Removal of the Flap Intermediate from the C-strand |
0.0 | 1.0 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |
0.0 | 0.8 | REACTOME SOS MEDIATED SIGNALLING | Genes involved in SOS-mediated signalling |