avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Rxra | mm10_v2_chr2_+_27677201_27677229 | 0.12 | 4.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_-_78422217 Show fit | 9.76 |
ENSMUST00000001122.5
|
solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2 |
|
chr19_+_39287074 Show fit | 9.11 |
ENSMUST00000003137.8
|
cytochrome P450, family 2, subfamily c, polypeptide 29 |
|
chr6_-_85820965 Show fit | 6.40 |
ENSMUST00000032074.3
|
camello-like 5 |
|
chr4_+_63356152 Show fit | 5.33 |
ENSMUST00000006687.4
|
orosomucoid 3 |
|
chr9_-_46235631 Show fit | 5.02 |
ENSMUST00000118649.1
|
apolipoprotein C-III |
|
chr3_+_138415484 Show fit | 3.87 |
ENSMUST00000161312.1
ENSMUST00000013458.8 |
alcohol dehydrogenase 4 (class II), pi polypeptide |
|
chr19_+_36554661 Show fit | 3.29 |
ENSMUST00000169036.2
ENSMUST00000047247.5 |
HECT domain containing 2 |
|
chr11_-_116199040 Show fit | 2.95 |
ENSMUST00000066587.5
|
acyl-Coenzyme A oxidase 1, palmitoyl |
|
chr6_+_72636244 Show fit | 2.94 |
ENSMUST00000101278.2
|
predicted gene 15401 |
|
chr2_-_3419019 Show fit | 2.84 |
ENSMUST00000115084.1
ENSMUST00000115083.1 |
meiosis expressed gene 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 10.4 | GO:0019373 | epoxygenase P450 pathway(GO:0019373) |
0.0 | 8.4 | GO:0098656 | anion transmembrane transport(GO:0098656) |
0.0 | 5.2 | GO:0051321 | meiotic cell cycle(GO:0051321) |
1.3 | 5.0 | GO:0010982 | regulation of high-density lipoprotein particle clearance(GO:0010982) |
0.8 | 5.0 | GO:0033540 | fatty acid beta-oxidation using acyl-CoA oxidase(GO:0033540) |
0.3 | 4.9 | GO:0043589 | Notch receptor processing(GO:0007220) skin morphogenesis(GO:0043589) |
1.0 | 3.9 | GO:0006069 | ethanol oxidation(GO:0006069) |
0.4 | 2.6 | GO:0006145 | purine nucleobase catabolic process(GO:0006145) |
0.3 | 2.3 | GO:1901162 | serotonin biosynthetic process(GO:0042427) primary amino compound biosynthetic process(GO:1901162) |
0.0 | 2.0 | GO:1900078 | positive regulation of cellular response to insulin stimulus(GO:1900078) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 5.3 | GO:0034363 | intermediate-density lipoprotein particle(GO:0034363) |
0.2 | 4.9 | GO:0035253 | ciliary rootlet(GO:0035253) |
0.1 | 4.5 | GO:0005778 | peroxisomal membrane(GO:0005778) microbody membrane(GO:0031903) |
0.1 | 1.8 | GO:0030992 | intraciliary transport particle B(GO:0030992) |
0.0 | 1.8 | GO:0005747 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
0.1 | 1.7 | GO:0042622 | photoreceptor outer segment membrane(GO:0042622) |
0.0 | 1.6 | GO:0016529 | sarcoplasmic reticulum(GO:0016529) |
0.0 | 1.6 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
0.1 | 1.4 | GO:0030056 | hemidesmosome(GO:0030056) |
0.1 | 1.3 | GO:0097427 | microtubule bundle(GO:0097427) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 9.8 | GO:0015293 | symporter activity(GO:0015293) |
1.5 | 9.1 | GO:0034875 | oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor(GO:0033695) caffeine oxidase activity(GO:0034875) |
1.3 | 5.3 | GO:0070653 | high-density lipoprotein particle receptor binding(GO:0070653) |
0.8 | 5.0 | GO:0016401 | palmitoyl-CoA oxidase activity(GO:0016401) |
0.6 | 4.9 | GO:0042500 | aspartic endopeptidase activity, intramembrane cleaving(GO:0042500) |
1.3 | 3.9 | GO:0003960 | NADPH:quinone reductase activity(GO:0003960) alcohol dehydrogenase activity, zinc-dependent(GO:0004024) |
0.1 | 3.6 | GO:0008391 | arachidonic acid monooxygenase activity(GO:0008391) |
0.0 | 3.1 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
0.0 | 2.3 | GO:0043130 | ubiquitin binding(GO:0043130) |
0.0 | 2.0 | GO:0003707 | steroid hormone receptor activity(GO:0003707) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.9 | PID LKB1 PATHWAY | LKB1 signaling events |
0.0 | 1.1 | PID RHOA PATHWAY | RhoA signaling pathway |
0.0 | 0.6 | PID HIF2PATHWAY | HIF-2-alpha transcription factor network |
0.0 | 0.5 | PID TRAIL PATHWAY | TRAIL signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 9.8 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |
0.3 | 5.6 | REACTOME ALPHA LINOLENIC ACID ALA METABOLISM | Genes involved in alpha-linolenic acid (ALA) metabolism |
0.3 | 5.3 | REACTOME HDL MEDIATED LIPID TRANSPORT | Genes involved in HDL-mediated lipid transport |
0.3 | 4.9 | REACTOME REGULATED PROTEOLYSIS OF P75NTR | Genes involved in Regulated proteolysis of p75NTR |
0.6 | 3.9 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |
0.2 | 2.6 | REACTOME PURINE CATABOLISM | Genes involved in Purine catabolism |
0.0 | 2.0 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.1 | 1.6 | REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS | Genes involved in Synthesis of very long-chain fatty acyl-CoAs |
0.0 | 1.4 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |
0.1 | 1.3 | REACTOME GLUCURONIDATION | Genes involved in Glucuronidation |