avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Smad1 | mm10_v2_chr8_-_79399513_79399532 | 0.06 | 7.5e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr8_-_111691002 Show fit | 15.28 |
ENSMUST00000034435.5
|
chymotrypsinogen B1 |
|
chr2_-_28563362 Show fit | 11.42 |
ENSMUST00000028161.5
|
carboxyl ester lipase |
|
chr6_-_41314700 Show fit | 7.83 |
ENSMUST00000064324.5
|
trypsin 5 |
|
chr6_+_41521782 Show fit | 7.81 |
ENSMUST00000070380.4
|
protease, serine, 2 |
|
chr14_-_51146757 Show fit | 7.62 |
ENSMUST00000080126.2
|
ribonuclease, RNase A family, 1 (pancreatic) |
|
chr1_+_93006328 Show fit | 7.04 |
ENSMUST00000059676.4
|
aquaporin 12 |
|
chr19_+_58728887 Show fit | 6.41 |
ENSMUST00000048644.5
|
pancreatic lipase related protein 1 |
|
chr19_+_4081565 Show fit | 6.10 |
ENSMUST00000159593.1
|
calcium binding protein 2 |
|
chr4_+_115518264 Show fit | 6.01 |
ENSMUST00000058785.3
ENSMUST00000094886.3 |
cytochrome P450, family 4, subfamily a, polypeptide 10 |
|
chr4_-_141825997 Show fit | 5.79 |
ENSMUST00000102481.3
|
chymotrypsin-like elastase family, member 2A |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 32.3 | GO:0007586 | digestion(GO:0007586) |
0.8 | 11.5 | GO:0006707 | cholesterol catabolic process(GO:0006707) sterol catabolic process(GO:0016127) |
0.3 | 9.1 | GO:0097435 | fibril organization(GO:0097435) |
0.5 | 7.8 | GO:0031000 | response to caffeine(GO:0031000) |
0.2 | 7.6 | GO:0006910 | phagocytosis, recognition(GO:0006910) |
2.0 | 5.9 | GO:0070947 | neutrophil mediated killing of fungus(GO:0070947) |
0.3 | 5.9 | GO:0061436 | establishment of skin barrier(GO:0061436) |
0.5 | 4.3 | GO:0061091 | regulation of phospholipid translocation(GO:0061091) positive regulation of phospholipid translocation(GO:0061092) |
0.1 | 4.3 | GO:0090501 | RNA phosphodiester bond hydrolysis(GO:0090501) |
0.7 | 4.2 | GO:1902732 | positive regulation of chondrocyte proliferation(GO:1902732) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 84.4 | GO:0005615 | extracellular space(GO:0005615) |
0.6 | 19.4 | GO:0042588 | zymogen granule(GO:0042588) |
0.0 | 15.4 | GO:0005764 | lytic vacuole(GO:0000323) lysosome(GO:0005764) |
0.6 | 9.9 | GO:0043205 | microfibril(GO:0001527) fibril(GO:0043205) |
0.1 | 7.9 | GO:0072562 | blood microparticle(GO:0072562) |
0.4 | 6.5 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.0 | 4.7 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.5 | 3.7 | GO:0019815 | B cell receptor complex(GO:0019815) |
1.2 | 3.5 | GO:0043190 | ATP-binding cassette (ABC) transporter complex(GO:0043190) |
0.3 | 3.1 | GO:0031232 | extrinsic component of external side of plasma membrane(GO:0031232) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 61.8 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
4.2 | 12.5 | GO:0050253 | retinyl-palmitate esterase activity(GO:0050253) |
2.1 | 12.3 | GO:0018685 | alkane 1-monooxygenase activity(GO:0018685) |
0.0 | 10.5 | GO:0005509 | calcium ion binding(GO:0005509) |
0.4 | 10.0 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.6 | 9.6 | GO:0004806 | triglyceride lipase activity(GO:0004806) |
2.1 | 8.6 | GO:0030023 | extracellular matrix constituent conferring elasticity(GO:0030023) |
0.1 | 8.0 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.3 | 7.9 | GO:0005184 | neuropeptide hormone activity(GO:0005184) |
1.1 | 7.8 | GO:0016892 | endoribonuclease activity, producing 3'-phosphomonoesters(GO:0016892) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 34.4 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.2 | 10.7 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.2 | 9.1 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.1 | 8.0 | PID NOTCH PATHWAY | Notch signaling pathway |
0.0 | 5.7 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 4.7 | PID IL4 2PATHWAY | IL4-mediated signaling events |
0.0 | 4.1 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 3.3 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 3.3 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
0.1 | 3.0 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 31.1 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.1 | 7.8 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |
0.3 | 6.8 | REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS | Genes involved in ABCA transporters in lipid homeostasis |
0.2 | 6.8 | REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS | Genes involved in Latent infection of Homo sapiens with Mycobacterium tuberculosis |
0.1 | 5.3 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.3 | 5.0 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
0.1 | 4.7 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.1 | 4.6 | REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D | Genes involved in Metabolism of steroid hormones and vitamins A and D |
0.0 | 4.6 | REACTOME SRP DEPENDENT COTRANSLATIONAL PROTEIN TARGETING TO MEMBRANE | Genes involved in SRP-dependent cotranslational protein targeting to membrane |
0.0 | 4.5 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |