avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Sox1 | mm10_v2_chr8_+_12395287_12395295 | -0.17 | 3.1e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_-_8218832 Show fit | 8.33 |
ENSMUST00000113298.2
|
solute carrier family 22. member 29 |
|
chr7_+_13623967 Show fit | 8.10 |
ENSMUST00000108525.2
|
sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 5 |
|
chr7_-_14123042 Show fit | 4.15 |
ENSMUST00000098809.2
|
sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 3 |
|
chr10_+_84756055 Show fit | 3.27 |
ENSMUST00000060397.6
|
regulatory factor X, 4 (influences HLA class II expression) |
|
chr17_+_34263209 Show fit | 2.44 |
ENSMUST00000040828.5
|
histocompatibility 2, class II antigen A, beta 1 |
|
chr6_+_37530173 Show fit | 2.31 |
ENSMUST00000040987.7
|
aldo-keto reductase family 1, member D1 |
|
chr5_+_21186267 Show fit | 2.28 |
ENSMUST00000036031.8
|
gamma-secretase activating protein |
|
chr6_+_37530204 Show fit | 2.04 |
ENSMUST00000151256.1
|
aldo-keto reductase family 1, member D1 |
|
chr17_-_34287770 Show fit | 2.03 |
ENSMUST00000174751.1
ENSMUST00000040655.6 |
histocompatibility 2, class II antigen A, alpha |
|
chr7_+_67655414 Show fit | 1.63 |
ENSMUST00000107470.1
|
tetratricopeptide repeat domain 23 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 8.3 | GO:0015747 | urate transport(GO:0015747) |
1.5 | 4.4 | GO:0030573 | bile acid catabolic process(GO:0030573) |
0.7 | 3.3 | GO:0021914 | negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning(GO:0021914) |
0.8 | 2.4 | GO:0002343 | peripheral B cell selection(GO:0002343) B cell affinity maturation(GO:0002344) |
0.2 | 2.3 | GO:1902004 | positive regulation of beta-amyloid formation(GO:1902004) |
0.1 | 2.0 | GO:0019886 | antigen processing and presentation of exogenous peptide antigen via MHC class II(GO:0019886) |
0.0 | 1.8 | GO:0030212 | hyaluronan metabolic process(GO:0030212) |
0.0 | 1.8 | GO:0097031 | NADH dehydrogenase complex assembly(GO:0010257) mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031) |
0.3 | 1.3 | GO:0060139 | positive regulation by symbiont of host apoptotic process(GO:0052151) positive regulation of apoptotic process by virus(GO:0060139) negative regulation of macrophage apoptotic process(GO:2000110) |
0.3 | 1.3 | GO:0060690 | epithelial cell differentiation involved in salivary gland development(GO:0060690) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 4.5 | GO:0042613 | MHC class II protein complex(GO:0042613) |
0.1 | 1.3 | GO:0005750 | mitochondrial respiratory chain complex III(GO:0005750) |
0.1 | 1.3 | GO:0005915 | zonula adherens(GO:0005915) |
0.2 | 1.1 | GO:0048237 | rough endoplasmic reticulum lumen(GO:0048237) |
0.1 | 1.1 | GO:0045298 | tubulin complex(GO:0045298) |
0.0 | 1.1 | GO:0030964 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
0.0 | 1.0 | GO:0000407 | pre-autophagosomal structure(GO:0000407) |
0.3 | 0.9 | GO:0032010 | phagolysosome(GO:0032010) |
0.0 | 0.7 | GO:0031932 | TORC2 complex(GO:0031932) |
0.0 | 0.6 | GO:0005779 | integral component of peroxisomal membrane(GO:0005779) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.8 | 12.3 | GO:0004027 | alcohol sulfotransferase activity(GO:0004027) |
0.6 | 8.3 | GO:1901702 | urate transmembrane transporter activity(GO:0015143) salt transmembrane transporter activity(GO:1901702) |
1.5 | 4.4 | GO:0047787 | delta4-3-oxosteroid 5beta-reductase activity(GO:0047787) |
0.2 | 2.4 | GO:1990405 | protein antigen binding(GO:1990405) |
0.0 | 2.3 | GO:0001540 | beta-amyloid binding(GO:0001540) |
0.1 | 2.0 | GO:0042605 | peptide antigen binding(GO:0042605) |
0.0 | 1.8 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.1 | 1.3 | GO:0019957 | C-C chemokine binding(GO:0019957) |
0.0 | 1.3 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.3 | 1.1 | GO:0031708 | endothelin B receptor binding(GO:0031708) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.3 | PID ECADHERIN KERATINOCYTE PATHWAY | E-cadherin signaling in keratinocytes |
0.0 | 1.3 | PID IL12 2PATHWAY | IL12-mediated signaling events |
0.1 | 1.1 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.0 | 1.1 | PID ENDOTHELIN PATHWAY | Endothelins |
0.0 | 0.7 | PID PI3KCI AKT PATHWAY | Class I PI3K signaling events mediated by Akt |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 4.4 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 24 HYDROXYCHOLESTEROL | Genes involved in Synthesis of bile acids and bile salts via 24-hydroxycholesterol |
0.3 | 1.3 | REACTOME BINDING AND ENTRY OF HIV VIRION | Genes involved in Binding and entry of HIV virion |
0.0 | 1.3 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.0 | 1.3 | REACTOME MITOCHONDRIAL PROTEIN IMPORT | Genes involved in Mitochondrial Protein Import |
0.0 | 1.1 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |
0.0 | 1.1 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
0.0 | 1.1 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.0 | 0.7 | REACTOME CD28 DEPENDENT PI3K AKT SIGNALING | Genes involved in CD28 dependent PI3K/Akt signaling |
0.0 | 0.4 | REACTOME MEMBRANE BINDING AND TARGETTING OF GAG PROTEINS | Genes involved in Membrane binding and targetting of GAG proteins |
0.0 | 0.3 | REACTOME BIOSYNTHESIS OF THE N GLYCAN PRECURSOR DOLICHOL LIPID LINKED OLIGOSACCHARIDE LLO AND TRANSFER TO A NASCENT PROTEIN | Genes involved in Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein |