avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Sox13 | mm10_v2_chr1_-_133424377_133424404 | 0.31 | 6.6e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_-_99438143 Show fit | 3.49 |
ENSMUST00000017743.2
|
keratin 20 |
|
chr3_-_75270073 Show fit | 1.76 |
ENSMUST00000039047.4
|
serine (or cysteine) peptidase inhibitor, clade I, member 2 |
|
chr12_+_36314160 Show fit | 1.58 |
ENSMUST00000041407.5
|
sclerostin domain containing 1 |
|
chr6_+_122513583 Show fit | 1.47 |
ENSMUST00000032210.7
ENSMUST00000148517.1 |
microfibrillar associated protein 5 |
|
chr6_+_122513643 Show fit | 1.44 |
ENSMUST00000118626.1
|
microfibrillar associated protein 5 |
|
chr12_+_24708984 Show fit | 1.37 |
ENSMUST00000154588.1
|
ribonucleotide reductase M2 |
|
chr15_-_36879816 Show fit | 1.31 |
ENSMUST00000100713.2
|
predicted gene 10384 |
|
chr7_-_132813095 Show fit | 1.13 |
ENSMUST00000106165.1
|
family with sequence similarity 53, member B |
|
chr8_+_105427634 Show fit | 0.82 |
ENSMUST00000067305.6
|
leucine rich repeat containing 36 |
|
chr10_+_53596936 Show fit | 0.78 |
ENSMUST00000020004.6
|
ASF1 anti-silencing function 1 homolog A (S. cerevisiae) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.5 | GO:0045109 | intermediate filament organization(GO:0045109) |
0.1 | 2.9 | GO:0097435 | fibril organization(GO:0097435) |
0.5 | 1.6 | GO:2000016 | negative regulation of determination of dorsal identity(GO:2000016) |
0.1 | 1.4 | GO:0009263 | deoxyribonucleotide biosynthetic process(GO:0009263) |
0.0 | 1.1 | GO:0035411 | catenin import into nucleus(GO:0035411) |
0.1 | 0.8 | GO:0040009 | regulation of growth rate(GO:0040009) |
0.0 | 0.8 | GO:0034723 | DNA replication-dependent nucleosome assembly(GO:0006335) DNA replication-dependent nucleosome organization(GO:0034723) |
0.0 | 0.7 | GO:0001886 | endothelial cell morphogenesis(GO:0001886) |
0.0 | 0.6 | GO:0014029 | neural crest formation(GO:0014029) |
0.1 | 0.4 | GO:1904565 | response to 1-oleoyl-sn-glycerol 3-phosphate(GO:1904565) cellular response to 1-oleoyl-sn-glycerol 3-phosphate(GO:1904566) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.5 | GO:0005882 | intermediate filament(GO:0005882) |
0.2 | 2.9 | GO:0043205 | microfibril(GO:0001527) fibril(GO:0043205) |
0.3 | 1.4 | GO:0005971 | ribonucleoside-diphosphate reductase complex(GO:0005971) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 2.9 | GO:0030023 | extracellular matrix constituent conferring elasticity(GO:0030023) |
0.0 | 1.8 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.1 | 1.6 | GO:0036122 | BMP binding(GO:0036122) BMP receptor activity(GO:0098821) |
0.3 | 1.4 | GO:0061731 | ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor(GO:0004748) oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor(GO:0016728) ribonucleoside-diphosphate reductase activity(GO:0061731) |
0.0 | 0.6 | GO:0001103 | RNA polymerase II repressing transcription factor binding(GO:0001103) |
0.1 | 0.4 | GO:0070915 | lysophosphatidic acid receptor activity(GO:0070915) |
0.1 | 0.4 | GO:1990189 | peptide-serine-N-acetyltransferase activity(GO:1990189) |
0.0 | 0.4 | GO:0005523 | tropomyosin binding(GO:0005523) |
0.1 | 0.3 | GO:0004111 | creatine kinase activity(GO:0004111) |
0.0 | 0.3 | GO:0005025 | transforming growth factor beta receptor activity, type I(GO:0005025) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.9 | PID NOTCH PATHWAY | Notch signaling pathway |
0.0 | 1.8 | PID BMP PATHWAY | BMP receptor signaling |
0.0 | 1.4 | PID E2F PATHWAY | E2F transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.4 | REACTOME G1 S SPECIFIC TRANSCRIPTION | Genes involved in G1/S-Specific Transcription |
0.0 | 0.3 | REACTOME SOS MEDIATED SIGNALLING | Genes involved in SOS-mediated signalling |