avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Sox12 | mm10_v2_chr2_-_152398046_152398076 | -0.86 | 1.8e-11 | Click! |
Sox18 | mm10_v2_chr2_-_181671622_181671645 | -0.51 | 1.5e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_+_40089688 Show fit | 21.90 |
ENSMUST00000068094.6
ENSMUST00000080171.2 |
cytochrome P450, family 2, subfamily c, polypeptide 50 |
|
chr19_-_7802578 Show fit | 20.14 |
ENSMUST00000120522.1
ENSMUST00000065634.7 |
solute carrier family 22 (organic cation transporter), member 26 |
|
chr18_-_74961252 Show fit | 16.69 |
ENSMUST00000066532.4
|
lipase, endothelial |
|
chr3_+_63295815 Show fit | 14.82 |
ENSMUST00000029400.1
|
membrane metallo endopeptidase |
|
chr19_-_7966000 Show fit | 13.66 |
ENSMUST00000182102.1
ENSMUST00000075619.4 |
solute carrier family 22, member 27 |
|
chr2_+_102706356 Show fit | 10.77 |
ENSMUST00000123759.1
ENSMUST00000111212.1 ENSMUST00000005220.4 |
solute carrier family 1 (glial high affinity glutamate transporter), member 2 |
|
chr19_-_8405060 Show fit | 9.47 |
ENSMUST00000064507.5
ENSMUST00000120540.1 ENSMUST00000096269.4 |
solute carrier family 22, member 30 |
|
chr2_+_102659213 Show fit | 9.15 |
ENSMUST00000111213.1
|
solute carrier family 1 (glial high affinity glutamate transporter), member 2 |
|
chr13_+_4049001 Show fit | 8.99 |
ENSMUST00000118717.2
|
aldo-keto reductase family 1, member C14 |
|
chr1_-_72212249 Show fit | 8.92 |
ENSMUST00000048860.7
|
melanoregulin |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
4.4 | 61.6 | GO:0015747 | urate transport(GO:0015747) |
2.0 | 21.9 | GO:0043651 | linoleic acid metabolic process(GO:0043651) |
2.8 | 19.9 | GO:0070779 | D-aspartate transport(GO:0070777) D-aspartate import(GO:0070779) |
1.3 | 19.7 | GO:0052695 | cellular glucuronidation(GO:0052695) |
4.2 | 16.7 | GO:0010986 | regulation of high-density lipoprotein particle clearance(GO:0010982) positive regulation of lipoprotein particle clearance(GO:0010986) |
4.9 | 14.8 | GO:0071492 | cellular response to UV-A(GO:0071492) |
0.1 | 13.2 | GO:0016052 | carbohydrate catabolic process(GO:0016052) |
0.4 | 10.8 | GO:0035634 | response to stilbenoid(GO:0035634) |
3.6 | 10.7 | GO:0002353 | plasma kallikrein-kinin cascade(GO:0002353) activation of plasma proteins involved in acute inflammatory response(GO:0002541) |
0.3 | 8.9 | GO:0032402 | melanosome transport(GO:0032402) anagen(GO:0042640) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 43.9 | GO:0005783 | endoplasmic reticulum(GO:0005783) |
0.0 | 23.2 | GO:0005887 | integral component of plasma membrane(GO:0005887) |
0.1 | 21.0 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
0.5 | 19.9 | GO:0030673 | axolemma(GO:0030673) |
0.1 | 19.3 | GO:0008021 | synaptic vesicle(GO:0008021) |
0.1 | 18.4 | GO:0005769 | early endosome(GO:0005769) |
0.1 | 12.4 | GO:0072562 | blood microparticle(GO:0072562) |
0.3 | 10.4 | GO:0048770 | melanosome(GO:0042470) pigment granule(GO:0048770) |
0.2 | 9.5 | GO:0030964 | mitochondrial respiratory chain complex I(GO:0005747) NADH dehydrogenase complex(GO:0030964) respiratory chain complex I(GO:0045271) |
0.0 | 5.5 | GO:0005777 | peroxisome(GO:0005777) microbody(GO:0042579) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
4.1 | 61.6 | GO:0015143 | urate transmembrane transporter activity(GO:0015143) salt transmembrane transporter activity(GO:1901702) |
0.7 | 26.3 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
5.5 | 21.9 | GO:0071614 | linoleic acid epoxygenase activity(GO:0071614) |
3.3 | 19.9 | GO:0015501 | glutamate:sodium symporter activity(GO:0015501) |
2.8 | 16.7 | GO:0008970 | phosphatidylcholine 1-acylhydrolase activity(GO:0008970) |
0.1 | 16.2 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
1.9 | 13.1 | GO:0004556 | alpha-amylase activity(GO:0004556) |
0.4 | 12.5 | GO:0050136 | NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136) |
1.9 | 11.1 | GO:0047023 | androsterone dehydrogenase activity(GO:0047023) |
0.4 | 11.1 | GO:0015347 | sodium-independent organic anion transmembrane transporter activity(GO:0015347) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 14.3 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.2 | 10.7 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.1 | 10.1 | PID CD8 TCR PATHWAY | TCR signaling in naïve CD8+ T cells |
0.1 | 5.7 | PID REG GR PATHWAY | Glucocorticoid receptor regulatory network |
0.1 | 5.2 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.1 | 3.9 | PID FOXO PATHWAY | FoxO family signaling |
0.1 | 3.8 | PID SYNDECAN 1 PATHWAY | Syndecan-1-mediated signaling events |
0.1 | 3.3 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.0 | 3.2 | PID HDAC CLASSI PATHWAY | Signaling events mediated by HDAC Class I |
0.1 | 1.8 | PID ERB GENOMIC PATHWAY | Validated nuclear estrogen receptor beta network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 18.3 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
0.7 | 15.4 | REACTOME INTRINSIC PATHWAY | Genes involved in Intrinsic Pathway |
0.9 | 11.2 | REACTOME GLUCURONIDATION | Genes involved in Glucuronidation |
0.8 | 11.0 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 24 HYDROXYCHOLESTEROL | Genes involved in Synthesis of bile acids and bile salts via 24-hydroxycholesterol |
0.6 | 8.3 | REACTOME ABACAVIR TRANSPORT AND METABOLISM | Genes involved in Abacavir transport and metabolism |
0.6 | 8.3 | REACTOME REGULATION OF COMPLEMENT CASCADE | Genes involved in Regulation of Complement cascade |
0.1 | 8.1 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.1 | 4.3 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.5 | 4.2 | REACTOME CREATION OF C4 AND C2 ACTIVATORS | Genes involved in Creation of C4 and C2 activators |
0.4 | 4.0 | REACTOME TRANSLOCATION OF ZAP 70 TO IMMUNOLOGICAL SYNAPSE | Genes involved in Translocation of ZAP-70 to Immunological synapse |