avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Sox21 | mm10_v2_chr14_-_118237016_118237035 | 0.35 | 3.4e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr3_-_75270073 Show fit | 6.49 |
ENSMUST00000039047.4
|
serine (or cysteine) peptidase inhibitor, clade I, member 2 |
|
chr16_+_36277145 Show fit | 5.98 |
ENSMUST00000042097.9
|
stefin A1 |
|
chr2_-_28621932 Show fit | 4.58 |
ENSMUST00000028156.7
ENSMUST00000164290.1 |
growth factor independent 1B |
|
chr1_+_174172738 Show fit | 4.45 |
ENSMUST00000027817.7
|
spectrin alpha, erythrocytic 1 |
|
chr7_-_142699510 Show fit | 4.28 |
ENSMUST00000105934.1
|
insulin II |
|
chr9_+_7558429 Show fit | 4.05 |
ENSMUST00000018765.2
|
matrix metallopeptidase 8 |
|
chr6_-_41035501 Show fit | 3.86 |
ENSMUST00000031931.5
|
RIKEN cDNA 2210010C04 gene |
|
chr6_-_78378851 Show fit | 3.24 |
ENSMUST00000089667.1
ENSMUST00000167492.1 |
regenerating islet-derived 3 delta |
|
chr2_+_174450678 Show fit | 3.14 |
ENSMUST00000016399.5
|
tubulin, beta 1 class VI |
|
chr3_-_106024911 Show fit | 2.54 |
ENSMUST00000066537.3
ENSMUST00000054973.3 |
chitinase 3-like 7 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 15.6 | GO:0010466 | negative regulation of peptidase activity(GO:0010466) |
0.6 | 4.6 | GO:0051572 | negative regulation of histone H3-K4 methylation(GO:0051572) |
0.1 | 4.5 | GO:0006779 | porphyrin-containing compound biosynthetic process(GO:0006779) |
1.4 | 4.3 | GO:1990535 | negative regulation of NAD(P)H oxidase activity(GO:0033861) neuron projection maintenance(GO:1990535) |
0.2 | 4.1 | GO:0030574 | collagen catabolic process(GO:0030574) |
0.0 | 3.1 | GO:0051225 | spindle assembly(GO:0051225) |
0.7 | 2.1 | GO:0070649 | formin-nucleated actin cable assembly(GO:0070649) |
0.4 | 2.1 | GO:0007412 | axon target recognition(GO:0007412) |
0.2 | 1.9 | GO:0002349 | histamine production involved in inflammatory response(GO:0002349) histamine secretion involved in inflammatory response(GO:0002441) histamine secretion by mast cell(GO:0002553) |
0.0 | 1.9 | GO:0007212 | dopamine receptor signaling pathway(GO:0007212) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 4.5 | GO:0032437 | cuticular plate(GO:0032437) |
0.2 | 4.3 | GO:0005732 | small nucleolar ribonucleoprotein complex(GO:0005732) |
0.0 | 4.1 | GO:0016363 | nuclear matrix(GO:0016363) |
0.1 | 2.1 | GO:0005868 | cytoplasmic dynein complex(GO:0005868) |
0.0 | 2.1 | GO:0097610 | cleavage furrow(GO:0032154) cell surface furrow(GO:0097610) |
0.3 | 1.7 | GO:0032133 | chromosome passenger complex(GO:0032133) |
0.0 | 1.7 | GO:0008023 | transcription elongation factor complex(GO:0008023) |
0.4 | 1.6 | GO:0060187 | cell pole(GO:0060187) |
0.0 | 1.3 | GO:0097228 | sperm principal piece(GO:0097228) |
0.0 | 1.2 | GO:0016327 | apicolateral plasma membrane(GO:0016327) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 15.4 | GO:0004866 | endopeptidase inhibitor activity(GO:0004866) |
0.0 | 7.4 | GO:0003779 | actin binding(GO:0003779) |
0.0 | 4.9 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.0 | 4.6 | GO:0001085 | RNA polymerase II transcription factor binding(GO:0001085) |
0.1 | 4.3 | GO:0005159 | insulin-like growth factor receptor binding(GO:0005159) |
0.0 | 3.9 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.0 | 3.1 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.3 | 2.8 | GO:0001609 | G-protein coupled adenosine receptor activity(GO:0001609) |
0.5 | 2.1 | GO:0031694 | alpha-2A adrenergic receptor binding(GO:0031694) |
0.1 | 1.7 | GO:0035174 | histone serine kinase activity(GO:0035174) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 12.2 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.0 | 2.1 | PID ALPHA SYNUCLEIN PATHWAY | Alpha-synuclein signaling |
0.0 | 1.7 | PID AURORA A PATHWAY | Aurora A signaling |
0.0 | 1.3 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.0 | 1.2 | PID PI3KCI PATHWAY | Class I PI3K signaling events |
0.1 | 1.0 | PID S1P S1P4 PATHWAY | S1P4 pathway |
0.0 | 0.9 | PID FCER1 PATHWAY | Fc-epsilon receptor I signaling in mast cells |
0.0 | 0.8 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.5 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.1 | 4.1 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.2 | 3.1 | REACTOME POST CHAPERONIN TUBULIN FOLDING PATHWAY | Genes involved in Post-chaperonin tubulin folding pathway |
0.1 | 2.8 | REACTOME NUCLEOTIDE LIKE PURINERGIC RECEPTORS | Genes involved in Nucleotide-like (purinergic) receptors |
0.0 | 1.4 | REACTOME PLC BETA MEDIATED EVENTS | Genes involved in PLC beta mediated events |
0.0 | 1.3 | REACTOME GLUCOSE TRANSPORT | Genes involved in Glucose transport |
0.0 | 1.3 | REACTOME APC C CDH1 MEDIATED DEGRADATION OF CDC20 AND OTHER APC C CDH1 TARGETED PROTEINS IN LATE MITOSIS EARLY G1 | Genes involved in APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1 |
0.0 | 1.2 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.0 | 0.7 | REACTOME ACYL CHAIN REMODELLING OF PI | Genes involved in Acyl chain remodelling of PI |
0.0 | 0.7 | REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS | Genes involved in Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis |