avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Sox30 | mm10_v2_chr11_+_45980309_45980337 | 0.40 | 1.5e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr3_-_113291449 Show fit | 8.97 |
ENSMUST00000179568.1
|
amylase 2a4 |
|
chr3_-_113324052 Show fit | 8.37 |
ENSMUST00000179314.1
|
amylase 2a3 |
|
chr3_-_75270073 Show fit | 5.89 |
ENSMUST00000039047.4
|
serine (or cysteine) peptidase inhibitor, clade I, member 2 |
|
chr17_-_31144271 Show fit | 4.27 |
ENSMUST00000024826.7
|
trefoil factor 2 (spasmolytic protein 1) |
|
chr6_-_136922169 Show fit | 4.17 |
ENSMUST00000032343.6
|
endoplasmic reticulum protein 27 |
|
chr14_+_116925379 Show fit | 2.94 |
ENSMUST00000088483.3
|
glypican 6 |
|
chr4_-_119189949 Show fit | 2.94 |
ENSMUST00000124626.1
|
erythroblast membrane-associated protein |
|
chr6_+_122513583 Show fit | 2.64 |
ENSMUST00000032210.7
ENSMUST00000148517.1 |
microfibrillar associated protein 5 |
|
chr9_-_103480328 Show fit | 2.54 |
ENSMUST00000124310.2
|
beaded filament structural protein 2, phakinin |
|
chr6_-_136781718 Show fit | 2.45 |
ENSMUST00000078095.6
ENSMUST00000032338.7 |
guanylate cyclase 2c |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.9 | GO:0010466 | negative regulation of peptidase activity(GO:0010466) |
0.2 | 5.2 | GO:0097435 | fibril organization(GO:0097435) |
0.6 | 4.3 | GO:0060455 | negative regulation of gastric acid secretion(GO:0060455) |
0.1 | 2.5 | GO:0070307 | lens fiber cell development(GO:0070307) |
0.0 | 2.4 | GO:0006182 | cGMP biosynthetic process(GO:0006182) |
0.2 | 2.2 | GO:0019375 | galactosylceramide biosynthetic process(GO:0006682) galactolipid biosynthetic process(GO:0019375) |
0.1 | 2.0 | GO:0014823 | response to activity(GO:0014823) |
0.0 | 2.0 | GO:0001541 | ovarian follicle development(GO:0001541) |
0.6 | 1.7 | GO:2000097 | regulation of smooth muscle cell-matrix adhesion(GO:2000097) |
0.0 | 1.6 | GO:0030819 | positive regulation of cyclic nucleotide biosynthetic process(GO:0030804) positive regulation of cAMP biosynthetic process(GO:0030819) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 5.8 | GO:0043205 | microfibril(GO:0001527) fibril(GO:0043205) |
0.0 | 3.6 | GO:0005882 | intermediate filament(GO:0005882) |
0.0 | 2.6 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.1 | 2.4 | GO:0008074 | guanylate cyclase complex, soluble(GO:0008074) |
0.3 | 1.7 | GO:0042583 | chromaffin granule(GO:0042583) |
0.0 | 1.6 | GO:0031430 | M band(GO:0031430) |
0.1 | 1.2 | GO:0005641 | nuclear envelope lumen(GO:0005641) |
0.1 | 1.0 | GO:0001739 | sex chromatin(GO:0001739) |
0.0 | 0.5 | GO:0032982 | myosin filament(GO:0032982) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.5 | 17.3 | GO:0004556 | alpha-amylase activity(GO:0004556) |
0.1 | 7.6 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
1.3 | 5.0 | GO:0030023 | extracellular matrix constituent conferring elasticity(GO:0030023) |
0.3 | 4.3 | GO:0045236 | CXCR chemokine receptor binding(GO:0045236) |
0.1 | 2.9 | GO:0043395 | heparan sulfate proteoglycan binding(GO:0043395) |
0.1 | 2.4 | GO:0015643 | toxic substance binding(GO:0015643) |
0.1 | 2.3 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.5 | 2.2 | GO:0001733 | galactosylceramide sulfotransferase activity(GO:0001733) |
0.4 | 2.0 | GO:0004105 | choline-phosphate cytidylyltransferase activity(GO:0004105) |
0.0 | 1.8 | GO:0019905 | syntaxin binding(GO:0019905) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.3 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.0 | 4.8 | PID NOTCH PATHWAY | Notch signaling pathway |
0.0 | 3.2 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 1.7 | PID HIF2PATHWAY | HIF-2-alpha transcription factor network |
0.0 | 1.3 | PID SHP2 PATHWAY | SHP2 signaling |
0.0 | 0.6 | PID ARF6 PATHWAY | Arf6 signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.9 | REACTOME HS GAG DEGRADATION | Genes involved in HS-GAG degradation |
0.1 | 2.2 | REACTOME GLYCOSPHINGOLIPID METABOLISM | Genes involved in Glycosphingolipid metabolism |
0.1 | 2.0 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |
0.0 | 1.7 | REACTOME SMAD2 SMAD3 SMAD4 HETEROTRIMER REGULATES TRANSCRIPTION | Genes involved in SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription |
0.1 | 1.3 | REACTOME PHOSPHORYLATION OF CD3 AND TCR ZETA CHAINS | Genes involved in Phosphorylation of CD3 and TCR zeta chains |
0.1 | 0.9 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |
0.0 | 0.2 | REACTOME REGULATION OF KIT SIGNALING | Genes involved in Regulation of KIT signaling |