avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Spdef | mm10_v2_chr17_-_27728889_27728956 | -0.16 | 3.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_-_40025253 Show fit | 3.66 |
ENSMUST00000163705.2
|
expressed sequence AI317395 |
|
chr8_+_105269837 Show fit | 3.58 |
ENSMUST00000172525.1
ENSMUST00000174837.1 ENSMUST00000173859.1 |
heat shock transcription factor 4 |
|
chr8_+_105269788 Show fit | 3.50 |
ENSMUST00000036127.2
ENSMUST00000163734.2 |
heat shock transcription factor 4 |
|
chr7_+_87246649 Show fit | 2.75 |
ENSMUST00000068829.5
ENSMUST00000032781.7 |
NADPH oxidase 4 |
|
chr9_-_65908676 Show fit | 2.15 |
ENSMUST00000119245.1
ENSMUST00000134338.1 ENSMUST00000179395.1 |
thyroid hormone receptor interactor 4 |
|
chr15_-_89170688 Show fit | 2.10 |
ENSMUST00000060808.9
|
plexin B2 |
|
chrX_-_75843063 Show fit | 2.01 |
ENSMUST00000114057.1
|
plastin 3 (T-isoform) |
|
chr1_-_121328024 Show fit | 1.97 |
ENSMUST00000003818.7
|
insulin induced gene 2 |
|
chrX_-_75843185 Show fit | 1.92 |
ENSMUST00000137192.1
|
plastin 3 (T-isoform) |
|
chr7_+_143473736 Show fit | 1.78 |
ENSMUST00000052348.5
|
solute carrier family 22 (organic cation transporter), member 18 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 7.1 | GO:0033169 | histone H3-K9 demethylation(GO:0033169) |
0.2 | 3.9 | GO:0051639 | actin filament network formation(GO:0051639) |
0.2 | 3.6 | GO:0001771 | immunological synapse formation(GO:0001771) |
0.2 | 3.0 | GO:0016558 | protein import into peroxisome matrix(GO:0016558) |
0.1 | 2.7 | GO:0050667 | homocysteine metabolic process(GO:0050667) |
0.6 | 2.3 | GO:0043376 | regulation of CD8-positive, alpha-beta T cell differentiation(GO:0043376) |
0.1 | 2.2 | GO:0006105 | succinate metabolic process(GO:0006105) |
0.1 | 2.2 | GO:0030970 | retrograde protein transport, ER to cytosol(GO:0030970) |
0.0 | 2.2 | GO:0071526 | semaphorin-plexin signaling pathway(GO:0071526) |
0.3 | 2.1 | GO:0036438 | maintenance of lens transparency(GO:0036438) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 6.1 | GO:0032432 | actin filament bundle(GO:0032432) |
0.0 | 4.6 | GO:0016607 | nuclear speck(GO:0016607) |
0.4 | 3.8 | GO:0089717 | spanning component of plasma membrane(GO:0044214) spanning component of membrane(GO:0089717) |
0.0 | 3.2 | GO:0005802 | trans-Golgi network(GO:0005802) |
0.2 | 2.7 | GO:0043020 | NADPH oxidase complex(GO:0043020) |
0.0 | 2.2 | GO:0098852 | lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852) |
0.2 | 2.0 | GO:0032937 | SREBP-SCAP-Insig complex(GO:0032937) |
0.4 | 1.9 | GO:0000839 | Hrd1p ubiquitin ligase ERAD-L complex(GO:0000839) |
0.0 | 1.9 | GO:0000315 | organellar large ribosomal subunit(GO:0000315) mitochondrial large ribosomal subunit(GO:0005762) |
0.2 | 1.8 | GO:0016593 | Cdc73/Paf1 complex(GO:0016593) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.5 | GO:0019903 | protein phosphatase binding(GO:0019903) |
0.0 | 5.4 | GO:0051015 | actin filament binding(GO:0051015) |
0.4 | 3.8 | GO:0070891 | lipoteichoic acid binding(GO:0070891) |
0.5 | 2.7 | GO:0016174 | NAD(P)H oxidase activity(GO:0016174) |
0.1 | 2.7 | GO:0017112 | Rab guanyl-nucleotide exchange factor activity(GO:0017112) |
0.1 | 2.5 | GO:0016922 | ligand-dependent nuclear receptor binding(GO:0016922) |
0.4 | 2.2 | GO:0051185 | coenzyme transporter activity(GO:0051185) |
0.5 | 2.1 | GO:0008109 | N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity(GO:0008109) |
0.2 | 2.1 | GO:0017154 | semaphorin receptor activity(GO:0017154) |
0.1 | 1.9 | GO:0031702 | type 1 angiotensin receptor binding(GO:0031702) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.4 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 1.9 | PID PTP1B PATHWAY | Signaling events mediated by PTP1B |
0.1 | 1.6 | PID DNA PK PATHWAY | DNA-PK pathway in nonhomologous end joining |
0.0 | 1.6 | PID TCR CALCIUM PATHWAY | Calcium signaling in the CD4+ TCR pathway |
0.0 | 1.5 | PID HIV NEF PATHWAY | HIV-1 Nef: Negative effector of Fas and TNF-alpha |
0.0 | 1.3 | PID PRL SIGNALING EVENTS PATHWAY | Signaling events mediated by PRL |
0.0 | 1.3 | PID IL2 1PATHWAY | IL2-mediated signaling events |
0.0 | 1.2 | PID CONE PATHWAY | Visual signal transduction: Cones |
0.0 | 1.2 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
0.0 | 1.2 | PID PDGFRB PATHWAY | PDGFR-beta signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.2 | REACTOME CITRIC ACID CYCLE TCA CYCLE | Genes involved in Citric acid cycle (TCA cycle) |
0.0 | 2.0 | REACTOME GLUCONEOGENESIS | Genes involved in Gluconeogenesis |
0.0 | 2.0 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.1 | 1.8 | REACTOME ORGANIC CATION ANION ZWITTERION TRANSPORT | Genes involved in Organic cation/anion/zwitterion transport |
0.1 | 1.7 | REACTOME ZINC TRANSPORTERS | Genes involved in Zinc transporters |
0.1 | 1.7 | REACTOME INSULIN RECEPTOR RECYCLING | Genes involved in Insulin receptor recycling |
0.0 | 1.7 | REACTOME TRANSPORT OF VITAMINS NUCLEOSIDES AND RELATED MOLECULES | Genes involved in Transport of vitamins, nucleosides, and related molecules |
0.1 | 1.6 | REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK | Genes involved in Regulation of Rheb GTPase activity by AMPK |
0.1 | 1.6 | REACTOME GAP JUNCTION DEGRADATION | Genes involved in Gap junction degradation |
0.1 | 1.6 | REACTOME ENDOSOMAL SORTING COMPLEX REQUIRED FOR TRANSPORT ESCRT | Genes involved in Endosomal Sorting Complex Required For Transport (ESCRT) |