avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Spib | mm10_v2_chr7_-_44532064_44532078 | 0.81 | 2.3e-09 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_+_80000292 Show fit | 24.32 |
ENSMUST00000088735.3
|
olfactomedin 4 |
|
chrX_-_7964166 Show fit | 23.13 |
ENSMUST00000128449.1
|
GATA binding protein 1 |
|
chr17_+_48232755 Show fit | 17.08 |
ENSMUST00000113251.3
ENSMUST00000048782.6 |
triggering receptor expressed on myeloid cells 1 |
|
chr15_-_66812593 Show fit | 14.79 |
ENSMUST00000100572.3
|
src-like adaptor |
|
chr1_+_174172738 Show fit | 14.52 |
ENSMUST00000027817.7
|
spectrin alpha, erythrocytic 1 |
|
chr11_-_17008647 Show fit | 14.24 |
ENSMUST00000102881.3
|
pleckstrin |
|
chr7_-_100856289 Show fit | 14.13 |
ENSMUST00000139604.1
|
RELT tumor necrosis factor receptor |
|
chr11_+_11685909 Show fit | 13.18 |
ENSMUST00000065433.5
|
IKAROS family zinc finger 1 |
|
chr1_+_171767123 Show fit | 12.76 |
ENSMUST00000015460.4
|
signaling lymphocytic activation molecule family member 1 |
|
chr9_+_56089962 Show fit | 12.39 |
ENSMUST00000059206.7
|
proline-serine-threonine phosphatase-interacting protein 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.2 | 32.1 | GO:0030886 | negative regulation of myeloid dendritic cell activation(GO:0030886) |
4.6 | 27.5 | GO:0032796 | uropod organization(GO:0032796) |
0.5 | 25.7 | GO:1900026 | positive regulation of substrate adhesion-dependent cell spreading(GO:1900026) |
7.7 | 23.1 | GO:0030221 | basophil differentiation(GO:0030221) |
6.6 | 19.7 | GO:0002277 | myeloid dendritic cell activation involved in immune response(GO:0002277) |
0.5 | 18.1 | GO:0007205 | protein kinase C-activating G-protein coupled receptor signaling pathway(GO:0007205) |
3.5 | 17.6 | GO:2000660 | negative regulation of interleukin-1-mediated signaling pathway(GO:2000660) |
2.5 | 17.5 | GO:0010897 | negative regulation of triglyceride catabolic process(GO:0010897) |
2.8 | 17.1 | GO:0070945 | neutrophil mediated killing of gram-negative bacterium(GO:0070945) |
2.0 | 15.8 | GO:1901164 | negative regulation of trophoblast cell migration(GO:1901164) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 31.3 | GO:0009897 | external side of plasma membrane(GO:0009897) |
1.2 | 27.5 | GO:0032426 | stereocilium tip(GO:0032426) |
0.5 | 27.1 | GO:0001772 | immunological synapse(GO:0001772) |
0.2 | 24.8 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
1.5 | 24.3 | GO:0042581 | specific granule(GO:0042581) |
5.2 | 20.6 | GO:0005944 | phosphatidylinositol 3-kinase complex, class IB(GO:0005944) |
0.1 | 19.8 | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane(GO:0031234) |
0.1 | 17.9 | GO:0032587 | ruffle membrane(GO:0032587) |
0.0 | 15.5 | GO:0005911 | cell-cell junction(GO:0005911) |
2.4 | 14.5 | GO:0032437 | cuticular plate(GO:0032437) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 37.1 | GO:0005096 | GTPase activator activity(GO:0005096) |
0.1 | 32.0 | GO:0045296 | cadherin binding(GO:0045296) |
1.2 | 27.5 | GO:0032036 | myosin heavy chain binding(GO:0032036) |
1.4 | 23.1 | GO:0008301 | DNA binding, bending(GO:0008301) |
0.2 | 21.3 | GO:0004896 | cytokine receptor activity(GO:0004896) |
0.5 | 21.0 | GO:0005070 | SH3/SH2 adaptor activity(GO:0005070) |
0.6 | 20.3 | GO:0008187 | poly-pyrimidine tract binding(GO:0008187) |
0.6 | 19.4 | GO:0030676 | Rac guanyl-nucleotide exchange factor activity(GO:0030676) |
1.3 | 18.8 | GO:0004143 | diacylglycerol kinase activity(GO:0004143) |
0.1 | 18.3 | GO:0019903 | protein phosphatase binding(GO:0019903) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 39.0 | PID IL8 CXCR2 PATHWAY | IL8- and CXCR2-mediated signaling events |
0.4 | 34.7 | PID IL4 2PATHWAY | IL4-mediated signaling events |
0.4 | 30.4 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.3 | 24.9 | PID HES HEY PATHWAY | Notch-mediated HES/HEY network |
0.2 | 21.7 | PID PDGFRB PATHWAY | PDGFR-beta signaling pathway |
0.4 | 21.4 | PID CD8 TCR PATHWAY | TCR signaling in naïve CD8+ T cells |
0.4 | 14.7 | PID IL1 PATHWAY | IL1-mediated signaling events |
0.2 | 13.5 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.3 | 11.7 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.2 | 9.8 | PID IL12 2PATHWAY | IL12-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 51.2 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.6 | 30.4 | REACTOME GPVI MEDIATED ACTIVATION CASCADE | Genes involved in GPVI-mediated activation cascade |
0.6 | 24.8 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |
0.3 | 20.5 | REACTOME CELL SURFACE INTERACTIONS AT THE VASCULAR WALL | Genes involved in Cell surface interactions at the vascular wall |
0.3 | 18.1 | REACTOME G ALPHA Z SIGNALLING EVENTS | Genes involved in G alpha (z) signalling events |
0.3 | 18.0 | REACTOME ACTIVATION OF THE MRNA UPON BINDING OF THE CAP BINDING COMPLEX AND EIFS AND SUBSEQUENT BINDING TO 43S | Genes involved in Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S |
0.2 | 17.4 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.2 | 17.3 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.1 | 16.1 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.3 | 15.4 | REACTOME IL1 SIGNALING | Genes involved in Interleukin-1 signaling |