avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Stat6 | mm10_v2_chr10_+_127642975_127643034 | -0.22 | 1.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr1_+_171767123 Show fit | 14.79 |
ENSMUST00000015460.4
|
signaling lymphocytic activation molecule family member 1 |
|
chr11_+_87793722 Show fit | 13.42 |
ENSMUST00000143021.2
|
myeloperoxidase |
|
chr11_+_87793470 Show fit | 12.51 |
ENSMUST00000020779.4
|
myeloperoxidase |
|
chr14_+_27000362 Show fit | 12.25 |
ENSMUST00000035433.8
|
homeobox gene expressed in ES cells |
|
chr4_+_120666562 Show fit | 9.25 |
ENSMUST00000094814.4
|
Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4 |
|
chr3_+_153844209 Show fit | 8.91 |
ENSMUST00000044089.3
|
ankyrin repeat and SOCS box-containing 17 |
|
chr9_-_70421533 Show fit | 8.09 |
ENSMUST00000034742.6
|
cyclin B2 |
|
chr17_+_48299952 Show fit | 7.81 |
ENSMUST00000170941.1
|
triggering receptor expressed on myeloid cells-like 2 |
|
chr2_+_84988194 Show fit | 7.02 |
ENSMUST00000028466.5
|
proteoglycan 3 |
|
chr9_+_112234257 Show fit | 6.90 |
ENSMUST00000149308.3
ENSMUST00000144424.2 ENSMUST00000139552.2 |
RIKEN cDNA 2900079G21 gene |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
8.6 | 25.9 | GO:0002148 | hypochlorous acid metabolic process(GO:0002148) hypochlorous acid biosynthetic process(GO:0002149) |
4.9 | 14.8 | GO:0002277 | myeloid dendritic cell activation involved in immune response(GO:0002277) |
1.2 | 12.3 | GO:0030916 | otic vesicle formation(GO:0030916) |
0.1 | 8.2 | GO:0043627 | response to estrogen(GO:0043627) |
1.8 | 7.0 | GO:0045575 | basophil activation(GO:0045575) |
1.7 | 6.9 | GO:0015851 | nucleobase transport(GO:0015851) pyrimidine nucleobase transport(GO:0015855) |
1.4 | 6.9 | GO:2000660 | negative regulation of interleukin-1-mediated signaling pathway(GO:2000660) |
2.0 | 6.1 | GO:0001928 | regulation of exocyst assembly(GO:0001928) |
0.1 | 5.6 | GO:0043029 | T cell homeostasis(GO:0043029) |
0.3 | 5.1 | GO:0015809 | arginine transport(GO:0015809) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.6 | 25.9 | GO:0042582 | primary lysosome(GO:0005766) azurophil granule(GO:0042582) |
0.2 | 16.2 | GO:0045335 | phagocytic vesicle(GO:0045335) |
0.0 | 7.0 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.0 | 7.0 | GO:0016324 | apical plasma membrane(GO:0016324) |
0.2 | 4.2 | GO:0035686 | sperm fibrous sheath(GO:0035686) |
0.9 | 3.7 | GO:0044194 | cytolytic granule(GO:0044194) |
0.0 | 2.6 | GO:0016363 | nuclear matrix(GO:0016363) |
0.0 | 2.2 | GO:0005905 | clathrin-coated pit(GO:0005905) |
0.0 | 2.2 | GO:0016528 | sarcoplasm(GO:0016528) |
0.0 | 2.2 | GO:0000776 | kinetochore(GO:0000776) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 25.9 | GO:0004601 | peroxidase activity(GO:0004601) |
0.0 | 14.7 | GO:0060089 | receptor activity(GO:0004872) molecular transducer activity(GO:0060089) |
0.1 | 14.0 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.1 | 9.2 | GO:0001105 | RNA polymerase II transcription coactivator activity(GO:0001105) |
2.3 | 6.9 | GO:0005151 | interleukin-1, Type II receptor binding(GO:0005151) interleukin-1 Type I receptor antagonist activity(GO:0045352) interleukin-1 Type II receptor antagonist activity(GO:0045353) |
2.3 | 6.9 | GO:0015389 | pyrimidine- and adenine-specific:sodium symporter activity(GO:0015389) |
0.3 | 6.1 | GO:0030275 | LRR domain binding(GO:0030275) |
0.6 | 5.1 | GO:0015181 | arginine transmembrane transporter activity(GO:0015181) |
0.5 | 4.2 | GO:0004332 | fructose-bisphosphate aldolase activity(GO:0004332) |
0.1 | 4.0 | GO:0043027 | cysteine-type endopeptidase inhibitor activity involved in apoptotic process(GO:0043027) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 25.8 | PID IL23 PATHWAY | IL23-mediated signaling events |
0.2 | 8.1 | PID FOXM1 PATHWAY | FOXM1 transcription factor network |
0.0 | 7.2 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.2 | 7.0 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.2 | 6.9 | PID IL1 PATHWAY | IL1-mediated signaling events |
0.0 | 4.2 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.1 | 3.7 | PID IL12 2PATHWAY | IL12-mediated signaling events |
0.0 | 3.5 | PID FGF PATHWAY | FGF signaling pathway |
0.0 | 2.3 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.1 | 1.9 | PID NFKAPPAB CANONICAL PATHWAY | Canonical NF-kappaB pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 8.1 | REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION | Genes involved in Cyclin A/B1 associated events during G2/M transition |
0.1 | 6.9 | REACTOME TRANSPORT OF VITAMINS NUCLEOSIDES AND RELATED MOLECULES | Genes involved in Transport of vitamins, nucleosides, and related molecules |
0.1 | 6.9 | REACTOME IL1 SIGNALING | Genes involved in Interleukin-1 signaling |
0.1 | 6.8 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.0 | 5.2 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.1 | 4.2 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.1 | 4.1 | REACTOME INTRINSIC PATHWAY FOR APOPTOSIS | Genes involved in Intrinsic Pathway for Apoptosis |
0.0 | 4.1 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.1 | 4.0 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.1 | 2.9 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |