avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
T | mm10_v2_chr17_+_8434423_8434423 | -0.48 | 3.1e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_+_20601958 Show fit | 7.35 |
ENSMUST00000087638.3
|
aldehyde dehydrogenase family 1, subfamily A1 |
|
chr19_+_37697792 Show fit | 5.44 |
ENSMUST00000025946.5
|
cytochrome P450, family 26, subfamily a, polypeptide 1 |
|
chr9_-_78355743 Show fit | 4.46 |
ENSMUST00000125479.1
|
glutathione S-transferase, alpha 2 (Yc2) |
|
chr10_+_88459569 Show fit | 4.28 |
ENSMUST00000020252.3
ENSMUST00000125612.1 |
synaptonemal complex protein 3 |
|
chr15_-_60921270 Show fit | 4.19 |
ENSMUST00000096418.3
|
alpha-1-B glycoprotein |
|
chr15_+_9335550 Show fit | 3.96 |
ENSMUST00000072403.6
|
UDP glycosyltransferases 3 family, polypeptide A2 |
|
chr5_-_87337165 Show fit | 3.57 |
ENSMUST00000031195.2
|
UDP glucuronosyltransferase 2 family, polypeptide A3 |
|
chr19_-_20727533 Show fit | 3.56 |
ENSMUST00000025656.3
|
aldehyde dehydrogenase family 1, subfamily A7 |
|
chr3_-_107943705 Show fit | 2.71 |
ENSMUST00000106680.1
ENSMUST00000106684.1 ENSMUST00000106685.2 |
glutathione S-transferase, mu 6 |
|
chr11_-_94392917 Show fit | 2.69 |
ENSMUST00000178136.1
ENSMUST00000021231.7 |
ATP-binding cassette, sub-family C (CFTR/MRP), member 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 8.4 | GO:0080184 | response to phenylpropanoid(GO:0080184) |
0.5 | 8.3 | GO:0052695 | cellular glucuronidation(GO:0052695) |
1.0 | 7.3 | GO:0042905 | 9-cis-retinoic acid biosynthetic process(GO:0042904) 9-cis-retinoic acid metabolic process(GO:0042905) |
1.4 | 5.4 | GO:0034653 | diterpenoid catabolic process(GO:0016103) retinoic acid catabolic process(GO:0034653) |
1.1 | 4.3 | GO:0000711 | meiotic DNA repair synthesis(GO:0000711) female meiosis sister chromatid cohesion(GO:0007066) |
0.4 | 3.6 | GO:0042573 | retinoic acid metabolic process(GO:0042573) |
0.5 | 2.7 | GO:0042908 | xenobiotic transport(GO:0042908) |
0.3 | 2.7 | GO:0090074 | negative regulation of protein homodimerization activity(GO:0090074) |
0.9 | 2.6 | GO:0031335 | regulation of sulfur amino acid metabolic process(GO:0031335) |
0.7 | 2.2 | GO:0015866 | ADP transport(GO:0015866) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 6.3 | GO:0005743 | mitochondrial inner membrane(GO:0005743) |
1.1 | 4.3 | GO:0000802 | transverse filament(GO:0000802) |
0.0 | 3.0 | GO:0072562 | blood microparticle(GO:0072562) |
0.1 | 1.7 | GO:0070971 | endoplasmic reticulum exit site(GO:0070971) |
0.1 | 1.4 | GO:0031209 | SCAR complex(GO:0031209) |
0.0 | 1.3 | GO:0099501 | synaptic vesicle membrane(GO:0030672) exocytic vesicle membrane(GO:0099501) |
0.3 | 1.2 | GO:1902636 | kinociliary basal body(GO:1902636) |
0.1 | 1.1 | GO:0019907 | cyclin-dependent protein kinase activating kinase holoenzyme complex(GO:0019907) |
0.1 | 1.0 | GO:0036038 | MKS complex(GO:0036038) |
0.0 | 0.9 | GO:0005779 | integral component of peroxisomal membrane(GO:0005779) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 12.3 | GO:0015020 | glucuronosyltransferase activity(GO:0015020) |
3.6 | 10.9 | GO:0018479 | benzaldehyde dehydrogenase (NAD+) activity(GO:0018479) |
0.2 | 6.6 | GO:1900750 | glutathione binding(GO:0043295) oligopeptide binding(GO:1900750) |
1.8 | 5.4 | GO:0008401 | retinoic acid 4-hydroxylase activity(GO:0008401) |
0.0 | 3.5 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
1.0 | 3.1 | GO:0015228 | coenzyme A transmembrane transporter activity(GO:0015228) adenosine 3',5'-bisphosphate transmembrane transporter activity(GO:0071077) AMP transmembrane transporter activity(GO:0080122) |
0.4 | 2.7 | GO:0008559 | xenobiotic-transporting ATPase activity(GO:0008559) |
0.2 | 2.7 | GO:0048273 | mitogen-activated protein kinase p38 binding(GO:0048273) |
0.1 | 2.7 | GO:0004364 | glutathione transferase activity(GO:0004364) |
0.9 | 2.6 | GO:0016206 | catechol O-methyltransferase activity(GO:0016206) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.4 | ST PHOSPHOINOSITIDE 3 KINASE PATHWAY | PI3K Pathway |
0.0 | 2.7 | PID ARF6 TRAFFICKING PATHWAY | Arf6 trafficking events |
0.1 | 2.3 | PID LIS1 PATHWAY | Lissencephaly gene (LIS1) in neuronal migration and development |
0.0 | 2.2 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.0 | 2.0 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.0 | 1.8 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.1 | 1.7 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.0 | 1.4 | PID ECADHERIN NASCENT AJ PATHWAY | E-cadherin signaling in the nascent adherens junction |
0.0 | 0.8 | PID ERBB1 INTERNALIZATION PATHWAY | Internalization of ErbB1 |
0.0 | 0.4 | PID FRA PATHWAY | Validated transcriptional targets of AP1 family members Fra1 and Fra2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 7.3 | REACTOME ETHANOL OXIDATION | Genes involved in Ethanol oxidation |
0.2 | 6.6 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.2 | 5.4 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.1 | 4.3 | REACTOME MEIOTIC SYNAPSIS | Genes involved in Meiotic Synapsis |
0.3 | 2.7 | REACTOME RECYCLING OF BILE ACIDS AND SALTS | Genes involved in Recycling of bile acids and salts |
0.1 | 2.6 | REACTOME PHASE II CONJUGATION | Genes involved in Phase II conjugation |
0.0 | 2.3 | REACTOME L1CAM INTERACTIONS | Genes involved in L1CAM interactions |
0.2 | 1.6 | REACTOME TRANSPORT OF ORGANIC ANIONS | Genes involved in Transport of organic anions |
0.0 | 1.5 | REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS | Genes involved in Regulation of gene expression in beta cells |
0.1 | 1.3 | REACTOME ZINC TRANSPORTERS | Genes involved in Zinc transporters |