avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Tbr1 | mm10_v2_chr2_+_61804453_61804538 | 0.15 | 3.8e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chrX_+_93654863 Show fit | 2.90 |
ENSMUST00000113933.2
|
phosphate cytidylyltransferase 1, choline, beta isoform |
|
chr14_+_80000292 Show fit | 2.69 |
ENSMUST00000088735.3
|
olfactomedin 4 |
|
chr14_-_51057242 Show fit | 2.42 |
ENSMUST00000089798.2
|
ribonuclease, RNase A family, 12 (non-active) |
|
chr2_+_84980458 Show fit | 2.20 |
ENSMUST00000028467.5
|
proteoglycan 2, bone marrow |
|
chr5_-_108749448 Show fit | 2.19 |
ENSMUST00000068946.7
|
ring finger protein 212 |
|
chr10_+_75573448 Show fit | 2.00 |
ENSMUST00000006508.3
|
gamma-glutamyltransferase 1 |
|
chr16_+_32756336 Show fit | 2.00 |
ENSMUST00000135753.1
|
mucin 4 |
|
chr1_-_132390301 Show fit | 1.95 |
ENSMUST00000132435.1
|
transmembrane and coiled-coil domains 2 |
|
chr17_+_29114142 Show fit | 1.92 |
ENSMUST00000141797.1
ENSMUST00000132262.1 ENSMUST00000141239.1 ENSMUST00000138816.1 |
predicted gene 16194 |
|
chr9_+_98490522 Show fit | 1.83 |
ENSMUST00000035029.2
|
retinol binding protein 2, cellular |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.5 | GO:0038083 | peptidyl-tyrosine autophosphorylation(GO:0038083) |
0.0 | 2.8 | GO:0001541 | ovarian follicle development(GO:0001541) |
0.2 | 2.7 | GO:0010529 | regulation of transposition(GO:0010528) negative regulation of transposition(GO:0010529) |
0.1 | 2.6 | GO:0035411 | catenin import into nucleus(GO:0035411) |
0.7 | 2.2 | GO:0002215 | defense response to nematode(GO:0002215) |
0.4 | 2.2 | GO:0006311 | meiotic gene conversion(GO:0006311) gene conversion(GO:0035822) |
0.4 | 2.2 | GO:0002838 | negative regulation of response to tumor cell(GO:0002835) negative regulation of immune response to tumor cell(GO:0002838) |
0.3 | 2.2 | GO:0070945 | neutrophil mediated killing of gram-negative bacterium(GO:0070945) |
0.1 | 2.2 | GO:0048821 | erythrocyte development(GO:0048821) |
0.0 | 2.2 | GO:0009409 | response to cold(GO:0009409) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 3.2 | GO:0000164 | protein phosphatase type 1 complex(GO:0000164) |
0.0 | 2.9 | GO:0031234 | extrinsic component of cytoplasmic side of plasma membrane(GO:0031234) |
0.4 | 2.8 | GO:0005833 | hemoglobin complex(GO:0005833) |
0.2 | 2.7 | GO:0042581 | specific granule(GO:0042581) |
0.0 | 2.7 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
0.1 | 2.4 | GO:0035098 | ESC/E(Z) complex(GO:0035098) |
0.0 | 2.4 | GO:0005871 | kinesin complex(GO:0005871) |
0.1 | 2.2 | GO:0031362 | anchored component of external side of plasma membrane(GO:0031362) |
0.1 | 2.0 | GO:0031528 | microvillus membrane(GO:0031528) |
0.0 | 2.0 | GO:0032154 | cleavage furrow(GO:0032154) cell surface furrow(GO:0097610) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 3.5 | GO:0004105 | choline-phosphate cytidylyltransferase activity(GO:0004105) |
0.1 | 3.3 | GO:0004715 | non-membrane spanning protein tyrosine kinase activity(GO:0004715) |
0.8 | 3.0 | GO:0047844 | deoxycytidine deaminase activity(GO:0047844) |
0.1 | 3.0 | GO:0043425 | bHLH transcription factor binding(GO:0043425) |
0.7 | 2.8 | GO:0031720 | haptoglobin binding(GO:0031720) |
0.6 | 2.4 | GO:0005176 | ErbB-2 class receptor binding(GO:0005176) |
0.0 | 2.4 | GO:0004864 | protein phosphatase inhibitor activity(GO:0004864) |
0.0 | 2.3 | GO:0017124 | SH3 domain binding(GO:0017124) |
0.1 | 2.2 | GO:0003887 | DNA-directed DNA polymerase activity(GO:0003887) |
0.1 | 2.2 | GO:0019789 | SUMO transferase activity(GO:0019789) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.3 | PID PLK1 PATHWAY | PLK1 signaling events |
0.0 | 2.2 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 2.1 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 2.0 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.1 | 1.9 | PID TCR JNK PATHWAY | JNK signaling in the CD4+ TCR pathway |
0.1 | 1.8 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.0 | 1.8 | PID NOTCH PATHWAY | Notch signaling pathway |
0.0 | 1.8 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
0.0 | 1.6 | PID FOXM1 PATHWAY | FOXM1 transcription factor network |
0.0 | 1.5 | PID RAS PATHWAY | Regulation of Ras family activation |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 2.6 | REACTOME HYALURONAN METABOLISM | Genes involved in Hyaluronan metabolism |
0.1 | 2.6 | REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D | Genes involved in Metabolism of steroid hormones and vitamins A and D |
0.2 | 2.3 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
0.1 | 2.0 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.0 | 2.0 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |
0.1 | 1.9 | REACTOME GENERATION OF SECOND MESSENGER MOLECULES | Genes involved in Generation of second messenger molecules |
0.1 | 1.8 | REACTOME PURINE SALVAGE | Genes involved in Purine salvage |
0.1 | 1.7 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |
0.0 | 1.5 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |
0.0 | 1.5 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |