avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Tbx1 | mm10_v2_chr16_-_18586959_18586970 | 0.32 | 5.9e-02 | Click! |
Eomes | mm10_v2_chr9_+_118478851_118478866 | 0.28 | 1.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_+_18884679 Show fit | 4.83 |
ENSMUST00000032573.6
|
peptidoglycan recognition protein 1 |
|
chr4_-_46404224 Show fit | 2.90 |
ENSMUST00000107764.2
|
hemogen |
|
chr6_-_122609964 Show fit | 2.39 |
ENSMUST00000032211.4
|
growth differentiation factor 3 |
|
chr4_-_134018829 Show fit | 2.28 |
ENSMUST00000051674.2
|
lin-28 homolog A (C. elegans) |
|
chr16_+_87553313 Show fit | 2.26 |
ENSMUST00000026700.7
|
Map3k7 C-terminal like |
|
chr10_+_26229707 Show fit | 1.54 |
ENSMUST00000060716.5
ENSMUST00000164660.1 |
sterile alpha motif domain containing 3 |
|
chr6_-_83527773 Show fit | 1.50 |
ENSMUST00000152029.1
|
actin, gamma 2, smooth muscle, enteric |
|
chr8_-_105933832 Show fit | 1.44 |
ENSMUST00000034368.6
|
chymotrypsin-like |
|
chr19_+_53460610 Show fit | 1.42 |
ENSMUST00000180442.1
|
RIKEN cDNA 4833407H14 gene |
|
chr6_-_83527452 Show fit | 1.38 |
ENSMUST00000141904.1
|
actin, gamma 2, smooth muscle, enteric |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.6 | 4.8 | GO:0051714 | regulation of cytolysis in other organism(GO:0051710) positive regulation of cytolysis in other organism(GO:0051714) |
0.0 | 2.9 | GO:0045667 | regulation of osteoblast differentiation(GO:0045667) |
0.0 | 2.7 | GO:0007585 | respiratory gaseous exchange(GO:0007585) |
0.1 | 2.6 | GO:0000186 | activation of MAPKK activity(GO:0000186) |
0.2 | 2.4 | GO:0048859 | formation of anatomical boundary(GO:0048859) |
0.3 | 2.3 | GO:0010587 | miRNA catabolic process(GO:0010587) |
0.0 | 2.1 | GO:0035411 | catenin import into nucleus(GO:0035411) |
0.2 | 1.9 | GO:0090527 | actin filament reorganization(GO:0090527) |
0.2 | 1.9 | GO:0010944 | negative regulation of transcription by competitive promoter binding(GO:0010944) |
0.4 | 1.3 | GO:0061537 | glycine secretion(GO:0061536) glycine secretion, neurotransmission(GO:0061537) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 2.6 | GO:0097208 | alveolar lamellar body(GO:0097208) |
0.0 | 2.3 | GO:0010494 | cytoplasmic stress granule(GO:0010494) |
0.0 | 2.3 | GO:0072562 | blood microparticle(GO:0072562) |
0.0 | 1.9 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
0.0 | 1.9 | GO:0005884 | actin filament(GO:0005884) |
0.0 | 1.2 | GO:0009925 | basal plasma membrane(GO:0009925) |
0.1 | 1.0 | GO:0000164 | protein phosphatase type 1 complex(GO:0000164) |
0.1 | 0.8 | GO:1990316 | ATG1/ULK1 kinase complex(GO:1990316) |
0.0 | 0.8 | GO:0032154 | cleavage furrow(GO:0032154) cell surface furrow(GO:0097610) |
0.0 | 0.8 | GO:0005881 | cytoplasmic microtubule(GO:0005881) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 4.8 | GO:0008745 | N-acetylmuramoyl-L-alanine amidase activity(GO:0008745) peptidoglycan receptor activity(GO:0016019) |
0.0 | 2.6 | GO:0017124 | SH3 domain binding(GO:0017124) |
0.0 | 2.4 | GO:0005160 | transforming growth factor beta receptor binding(GO:0005160) |
0.2 | 2.3 | GO:0002151 | G-quadruplex RNA binding(GO:0002151) |
0.1 | 2.3 | GO:0004709 | MAP kinase kinase kinase activity(GO:0004709) |
0.6 | 1.9 | GO:0071820 | N-box binding(GO:0071820) |
0.2 | 1.9 | GO:0008889 | glycerophosphodiester phosphodiesterase activity(GO:0008889) |
0.1 | 1.3 | GO:0015187 | glycine transmembrane transporter activity(GO:0015187) |
0.1 | 1.1 | GO:0015193 | L-proline transmembrane transporter activity(GO:0015193) |
0.0 | 1.1 | GO:0030275 | LRR domain binding(GO:0030275) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.9 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 3.4 | NABA SECRETED FACTORS | Genes encoding secreted soluble factors |
0.1 | 3.1 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.0 | 1.9 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.0 | 1.4 | PID FGF PATHWAY | FGF signaling pathway |
0.1 | 1.1 | PID TCR JNK PATHWAY | JNK signaling in the CD4+ TCR pathway |
0.0 | 1.1 | PID MET PATHWAY | Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met) |
0.0 | 0.8 | PID RHOA PATHWAY | RhoA signaling pathway |
0.0 | 0.6 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
0.0 | 0.6 | PID EPO PATHWAY | EPO signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.9 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.0 | 1.8 | REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION | Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression |
0.0 | 1.4 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
0.0 | 1.2 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |
0.0 | 1.1 | REACTOME GENERATION OF SECOND MESSENGER MOLECULES | Genes involved in Generation of second messenger molecules |
0.1 | 1.0 | REACTOME REGULATION OF IFNG SIGNALING | Genes involved in Regulation of IFNG signaling |
0.0 | 0.9 | REACTOME CGMP EFFECTS | Genes involved in cGMP effects |
0.0 | 0.7 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
0.0 | 0.5 | REACTOME CS DS DEGRADATION | Genes involved in CS/DS degradation |
0.0 | 0.5 | REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES | Genes involved in Chemokine receptors bind chemokines |