avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Tbx21 | mm10_v2_chr11_-_97115327_97115332 | 0.35 | 3.7e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr12_-_4874341 Show fit | 16.69 |
ENSMUST00000137337.1
ENSMUST00000045921.7 |
major facilitator superfamily domain containing 2B |
|
chr16_-_36408349 Show fit | 13.47 |
ENSMUST00000023619.6
|
stefin A2 |
|
chr9_+_110419750 Show fit | 13.09 |
ENSMUST00000035061.6
|
neutrophilic granule protein |
|
chr11_+_24080664 Show fit | 8.05 |
ENSMUST00000118955.1
|
B cell CLL/lymphoma 11A (zinc finger protein) |
|
chr17_+_48247759 Show fit | 7.66 |
ENSMUST00000048065.5
|
triggering receptor expressed on myeloid cells 3 |
|
chr7_-_127042420 Show fit | 6.33 |
ENSMUST00000032915.6
|
kinesin family member 22 |
|
chr7_+_18884679 Show fit | 6.21 |
ENSMUST00000032573.6
|
peptidoglycan recognition protein 1 |
|
chr7_+_128062657 Show fit | 5.56 |
ENSMUST00000120355.1
ENSMUST00000106240.2 ENSMUST00000098015.3 |
integrin alpha M |
|
chr7_-_126704816 Show fit | 5.50 |
ENSMUST00000032949.7
|
coronin, actin binding protein 1A |
|
chr11_+_116531097 Show fit | 5.45 |
ENSMUST00000138840.1
|
sphingosine kinase 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.9 | 13.4 | GO:0014004 | microglia differentiation(GO:0014004) microglia development(GO:0014005) |
3.3 | 13.1 | GO:1901491 | negative regulation of lymphangiogenesis(GO:1901491) |
3.1 | 9.3 | GO:0015811 | L-cystine transport(GO:0015811) |
2.0 | 8.0 | GO:1904799 | regulation of neuron remodeling(GO:1904799) negative regulation of neuron remodeling(GO:1904800) |
0.1 | 7.8 | GO:0007193 | adenylate cyclase-inhibiting G-protein coupled receptor signaling pathway(GO:0007193) |
1.1 | 7.7 | GO:0070945 | neutrophil mediated killing of gram-negative bacterium(GO:0070945) |
2.1 | 6.2 | GO:0051710 | regulation of cytolysis in other organism(GO:0051710) positive regulation of cytolysis in other organism(GO:0051714) |
0.0 | 6.0 | GO:0010951 | negative regulation of endopeptidase activity(GO:0010951) |
0.1 | 5.7 | GO:0007080 | mitotic metaphase plate congression(GO:0007080) |
0.9 | 5.5 | GO:0032796 | uropod organization(GO:0032796) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 16.9 | GO:0031410 | cytoplasmic vesicle(GO:0031410) |
0.3 | 13.4 | GO:0008305 | integrin complex(GO:0008305) |
0.1 | 9.3 | GO:0031526 | brush border membrane(GO:0031526) |
0.0 | 8.7 | GO:0014069 | postsynaptic density(GO:0014069) postsynaptic specialization(GO:0099572) |
0.0 | 6.5 | GO:0031965 | nuclear membrane(GO:0031965) |
0.1 | 6.3 | GO:0005871 | kinesin complex(GO:0005871) |
0.2 | 5.5 | GO:0032426 | stereocilium tip(GO:0032426) |
0.0 | 5.5 | GO:0008021 | synaptic vesicle(GO:0008021) |
1.2 | 4.8 | GO:0031092 | platelet alpha granule membrane(GO:0031092) |
0.3 | 3.9 | GO:0042589 | zymogen granule membrane(GO:0042589) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 25.0 | GO:0004869 | cysteine-type endopeptidase inhibitor activity(GO:0004869) |
2.3 | 16.4 | GO:0001851 | complement component C3b binding(GO:0001851) |
3.1 | 9.3 | GO:0015184 | L-cystine transmembrane transporter activity(GO:0015184) |
0.0 | 8.0 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.0 | 7.8 | GO:0005096 | GTPase activator activity(GO:0005096) |
1.1 | 7.7 | GO:0042834 | peptidoglycan binding(GO:0042834) |
0.0 | 7.5 | GO:0001664 | G-protein coupled receptor binding(GO:0001664) |
0.1 | 6.3 | GO:0003777 | microtubule motor activity(GO:0003777) |
1.2 | 6.2 | GO:0008745 | N-acetylmuramoyl-L-alanine amidase activity(GO:0008745) peptidoglycan receptor activity(GO:0016019) |
0.8 | 5.5 | GO:0008481 | sphinganine kinase activity(GO:0008481) D-erythro-sphingosine kinase activity(GO:0017050) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 16.6 | PID INTEGRIN2 PATHWAY | Beta2 integrin cell surface interactions |
0.2 | 5.5 | PID S1P META PATHWAY | Sphingosine 1-phosphate (S1P) pathway |
0.1 | 4.8 | PID ALPHA SYNUCLEIN PATHWAY | Alpha-synuclein signaling |
0.1 | 4.4 | PID CDC42 REG PATHWAY | Regulation of CDC42 activity |
0.1 | 3.4 | PID ATR PATHWAY | ATR signaling pathway |
0.1 | 1.9 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.1 | 1.6 | ST GRANULE CELL SURVIVAL PATHWAY | Granule Cell Survival Pathway is a specific case of more general PAC1 Receptor Pathway. |
0.0 | 1.6 | PID P53 REGULATION PATHWAY | p53 pathway |
0.0 | 1.5 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.0 | 1.3 | ST FAS SIGNALING PATHWAY | Fas Signaling Pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 16.4 | REACTOME CELL SURFACE INTERACTIONS AT THE VASCULAR WALL | Genes involved in Cell surface interactions at the vascular wall |
0.1 | 10.7 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.3 | 9.3 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |
0.2 | 6.3 | REACTOME KINESINS | Genes involved in Kinesins |
0.1 | 5.5 | REACTOME SPHINGOLIPID DE NOVO BIOSYNTHESIS | Genes involved in Sphingolipid de novo biosynthesis |
0.1 | 5.1 | REACTOME RAP1 SIGNALLING | Genes involved in Rap1 signalling |
0.1 | 5.0 | REACTOME AMYLOIDS | Genes involved in Amyloids |
0.3 | 4.3 | REACTOME HYALURONAN METABOLISM | Genes involved in Hyaluronan metabolism |
0.1 | 3.9 | REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT | Genes involved in Lipid digestion, mobilization, and transport |
0.2 | 3.8 | REACTOME UNWINDING OF DNA | Genes involved in Unwinding of DNA |