avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Msc | mm10_v2_chr1_-_14755966_14755998 | 0.59 | 1.7e-04 | Click! |
Tcf21 | mm10_v2_chr10_-_22820126_22820150 | 0.38 | 2.2e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr4_-_137430517 Show fit | 4.85 |
ENSMUST00000102522.4
|
chymotrypsin-like elastase family, member 3B |
|
chr19_+_58759700 Show fit | 3.90 |
ENSMUST00000026081.3
|
pancreatic lipase-related protein 2 |
|
chr4_-_137409777 Show fit | 3.12 |
ENSMUST00000024200.6
|
predicted gene 13011 |
|
chr17_-_43502773 Show fit | 2.92 |
ENSMUST00000024707.8
ENSMUST00000117137.1 |
meprin 1 alpha |
|
chr1_+_135799402 Show fit | 2.82 |
ENSMUST00000152208.1
ENSMUST00000152075.1 ENSMUST00000154463.1 ENSMUST00000139986.1 |
troponin I, skeletal, slow 1 |
|
chr5_-_131538687 Show fit | 2.80 |
ENSMUST00000161374.1
|
autism susceptibility candidate 2 |
|
chrX_+_101449078 Show fit | 2.71 |
ENSMUST00000033674.5
|
integrin beta 1 binding protein 2 |
|
chr2_-_27072175 Show fit | 2.69 |
ENSMUST00000009358.2
|
transmembrane protein 8C |
|
chr6_+_112459501 Show fit | 2.57 |
ENSMUST00000075477.6
|
caveolin 3 |
|
chr1_+_135799833 Show fit | 2.54 |
ENSMUST00000148201.1
|
troponin I, skeletal, slow 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 5.2 | GO:0014883 | transition between fast and slow fiber(GO:0014883) |
0.3 | 4.7 | GO:2000096 | positive regulation of Wnt signaling pathway, planar cell polarity pathway(GO:2000096) |
0.1 | 4.4 | GO:0002026 | regulation of the force of heart contraction(GO:0002026) |
0.1 | 4.1 | GO:0006910 | phagocytosis, recognition(GO:0006910) |
0.2 | 3.7 | GO:0019377 | glycolipid catabolic process(GO:0019377) |
0.4 | 3.5 | GO:0035995 | detection of muscle stretch(GO:0035995) |
0.9 | 2.8 | GO:2000620 | positive regulation of histone H4-K16 acetylation(GO:2000620) |
0.1 | 2.8 | GO:0007026 | negative regulation of microtubule depolymerization(GO:0007026) |
0.4 | 2.6 | GO:0032796 | uropod organization(GO:0032796) |
0.3 | 2.5 | GO:0030886 | negative regulation of myeloid dendritic cell activation(GO:0030886) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.2 | GO:0031672 | A band(GO:0031672) |
0.4 | 8.0 | GO:0005861 | troponin complex(GO:0005861) |
0.0 | 6.3 | GO:0030018 | Z disc(GO:0030018) |
0.1 | 4.6 | GO:0008023 | transcription elongation factor complex(GO:0008023) |
0.0 | 4.6 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.2 | 4.1 | GO:0042571 | immunoglobulin complex, circulating(GO:0042571) |
0.1 | 4.1 | GO:0005891 | voltage-gated calcium channel complex(GO:0005891) |
0.1 | 3.9 | GO:0001891 | phagocytic cup(GO:0001891) |
0.2 | 3.6 | GO:0042589 | zymogen granule membrane(GO:0042589) |
0.1 | 3.0 | GO:0001533 | cornified envelope(GO:0001533) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 6.1 | GO:0050649 | testosterone 6-beta-hydroxylase activity(GO:0050649) |
0.0 | 6.0 | GO:0003779 | actin binding(GO:0003779) |
0.1 | 5.7 | GO:0003785 | actin monomer binding(GO:0003785) |
0.2 | 4.1 | GO:0034987 | immunoglobulin receptor binding(GO:0034987) |
0.3 | 3.9 | GO:0047372 | acylglycerol lipase activity(GO:0047372) |
0.0 | 3.7 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
0.0 | 3.7 | GO:0005178 | integrin binding(GO:0005178) |
0.1 | 2.9 | GO:0008307 | structural constituent of muscle(GO:0008307) |
0.0 | 2.8 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.3 | 2.6 | GO:0071253 | connexin binding(GO:0071253) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 9.3 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 2.6 | PID PDGFRA PATHWAY | PDGFR-alpha signaling pathway |
0.1 | 2.5 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.0 | 1.9 | PID FOXM1 PATHWAY | FOXM1 transcription factor network |
0.0 | 1.7 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 1.6 | PID FCER1 PATHWAY | Fc-epsilon receptor I signaling in mast cells |
0.1 | 1.5 | PID TCR JNK PATHWAY | JNK signaling in the CD4+ TCR pathway |
0.1 | 1.3 | PID EPHA2 FWD PATHWAY | EPHA2 forward signaling |
0.0 | 1.3 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
0.1 | 1.2 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 13.2 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.1 | 3.6 | REACTOME LIPID DIGESTION MOBILIZATION AND TRANSPORT | Genes involved in Lipid digestion, mobilization, and transport |
0.1 | 2.6 | REACTOME ACTIVATED NOTCH1 TRANSMITS SIGNAL TO THE NUCLEUS | Genes involved in Activated NOTCH1 Transmits Signal to the Nucleus |
0.0 | 2.3 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.0 | 2.2 | REACTOME GLYCOLYSIS | Genes involved in Glycolysis |
0.0 | 2.2 | REACTOME IMMUNOREGULATORY INTERACTIONS BETWEEN A LYMPHOID AND A NON LYMPHOID CELL | Genes involved in Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell |
0.2 | 2.1 | REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION | Genes involved in E2F-enabled inhibition of pre-replication complex formation |
0.1 | 1.8 | REACTOME PLATELET CALCIUM HOMEOSTASIS | Genes involved in Platelet calcium homeostasis |
0.1 | 1.7 | REACTOME UNWINDING OF DNA | Genes involved in Unwinding of DNA |
0.0 | 1.7 | REACTOME RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES | Genes involved in Recruitment of mitotic centrosome proteins and complexes |