avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Tcf7l1 | mm10_v2_chr6_-_72789240_72789262 | 0.63 | 4.4e-05 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_173021902 Show fit | 4.03 |
ENSMUST00000029014.9
|
RNA binding motif protein 38 |
|
chr12_+_24831583 Show fit | 3.74 |
ENSMUST00000110942.3
ENSMUST00000078902.6 |
membrane bound O-acyltransferase domain containing 2 |
|
chr9_+_98490522 Show fit | 3.71 |
ENSMUST00000035029.2
|
retinol binding protein 2, cellular |
|
chr4_+_115057683 Show fit | 3.64 |
ENSMUST00000161601.1
|
T cell acute lymphocytic leukemia 1 |
|
chr18_+_21072329 Show fit | 3.64 |
ENSMUST00000082235.4
|
meprin 1 beta |
|
chr5_-_148392810 Show fit | 3.63 |
ENSMUST00000138257.1
|
solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 |
|
chr10_+_43579161 Show fit | 3.52 |
ENSMUST00000058714.8
|
CD24a antigen |
|
chr2_+_173022360 Show fit | 3.41 |
ENSMUST00000173997.1
|
RNA binding motif protein 38 |
|
chr5_-_122050102 Show fit | 3.16 |
ENSMUST00000154139.1
|
cut-like homeobox 2 |
|
chr7_+_45216671 Show fit | 2.99 |
ENSMUST00000134420.1
|
TEA domain family member 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 7.4 | GO:0006977 | DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest(GO:0006977) |
0.0 | 4.7 | GO:0008654 | phospholipid biosynthetic process(GO:0008654) |
0.5 | 4.2 | GO:0070294 | renal sodium ion transport(GO:0003096) renal sodium ion absorption(GO:0070294) |
0.5 | 3.7 | GO:0006776 | vitamin A metabolic process(GO:0006776) |
0.1 | 3.7 | GO:1901998 | toxin transport(GO:1901998) |
0.0 | 3.7 | GO:0016485 | protein processing(GO:0016485) |
1.2 | 3.6 | GO:0060217 | hemangioblast cell differentiation(GO:0060217) |
0.2 | 3.6 | GO:0015809 | arginine transport(GO:0015809) |
1.2 | 3.5 | GO:0002842 | positive regulation of T cell mediated immune response to tumor cell(GO:0002842) |
0.1 | 3.2 | GO:0007614 | short-term memory(GO:0007614) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.7 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
1.2 | 3.6 | GO:0033193 | Lsd1/2 complex(GO:0033193) |
0.1 | 3.2 | GO:0031362 | anchored component of external side of plasma membrane(GO:0031362) |
1.0 | 3.0 | GO:0071149 | TEAD-2-YAP complex(GO:0071149) |
0.1 | 2.5 | GO:0051233 | spindle midzone(GO:0051233) |
0.0 | 2.1 | GO:0016460 | myosin II complex(GO:0016460) |
0.0 | 1.9 | GO:0008076 | voltage-gated potassium channel complex(GO:0008076) |
0.0 | 1.8 | GO:0030175 | filopodium(GO:0030175) |
0.0 | 1.7 | GO:0097610 | cleavage furrow(GO:0032154) cell surface furrow(GO:0097610) |
0.2 | 1.6 | GO:0001739 | sex chromatin(GO:0001739) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.4 | GO:0003730 | mRNA 3'-UTR binding(GO:0003730) |
0.1 | 3.8 | GO:0004190 | aspartic-type endopeptidase activity(GO:0004190) |
0.6 | 3.7 | GO:0047184 | 1-acylglycerophosphocholine O-acyltransferase activity(GO:0047184) |
0.3 | 3.7 | GO:0016918 | retinal binding(GO:0016918) retinol binding(GO:0019841) |
0.1 | 3.7 | GO:0031005 | filamin binding(GO:0031005) |
0.5 | 3.6 | GO:0015181 | arginine transmembrane transporter activity(GO:0015181) |
0.2 | 3.5 | GO:0030296 | protein tyrosine kinase activator activity(GO:0030296) |
0.0 | 3.4 | GO:0001078 | transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding(GO:0001078) |
0.1 | 3.0 | GO:0070888 | E-box binding(GO:0070888) |
0.0 | 2.8 | GO:0004222 | metalloendopeptidase activity(GO:0004222) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.5 | PID AJDISS 2PATHWAY | Posttranslational regulation of adherens junction stability and dissassembly |
0.0 | 2.4 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
0.0 | 2.2 | PID ENDOTHELIN PATHWAY | Endothelins |
0.0 | 2.0 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.0 | 1.9 | PID P38 ALPHA BETA PATHWAY | Regulation of p38-alpha and p38-beta |
0.0 | 1.7 | PID ECADHERIN NASCENT AJ PATHWAY | E-cadherin signaling in the nascent adherens junction |
0.0 | 1.6 | PID HEDGEHOG 2PATHWAY | Signaling events mediated by the Hedgehog family |
0.1 | 1.4 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.0 | 1.4 | PID REELIN PATHWAY | Reelin signaling pathway |
0.0 | 0.9 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.5 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.1 | 4.0 | REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D | Genes involved in Metabolism of steroid hormones and vitamins A and D |
0.1 | 3.7 | REACTOME ACYL CHAIN REMODELLING OF PC | Genes involved in Acyl chain remodelling of PC |
0.2 | 2.7 | REACTOME ORGANIC CATION ANION ZWITTERION TRANSPORT | Genes involved in Organic cation/anion/zwitterion transport |
0.1 | 2.7 | REACTOME SYNTHESIS OF PA | Genes involved in Synthesis of PA |
0.0 | 2.0 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.1 | 1.9 | REACTOME CGMP EFFECTS | Genes involved in cGMP effects |
0.0 | 1.7 | REACTOME RESPIRATORY ELECTRON TRANSPORT ATP SYNTHESIS BY CHEMIOSMOTIC COUPLING AND HEAT PRODUCTION BY UNCOUPLING PROTEINS | Genes involved in Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins. |
0.0 | 1.6 | REACTOME MRNA SPLICING | Genes involved in mRNA Splicing |
0.0 | 1.5 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |