avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Tfap2c | mm10_v2_chr2_+_172550761_172550782 | 0.58 | 2.4e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr19_+_7268296 Show fit | 15.71 |
ENSMUST00000066646.4
|
REST corepressor 2 |
|
chr12_+_109459843 Show fit | 15.31 |
ENSMUST00000173812.1
|
delta-like 1 homolog (Drosophila) |
|
chr12_-_76709997 Show fit | 12.08 |
ENSMUST00000166101.1
|
spectrin beta, erythrocytic |
|
chrX_-_142306170 Show fit | 11.23 |
ENSMUST00000134825.2
|
potassium voltage-gated channel, Isk-related family, member 1-like, pseudogene |
|
chr5_+_33658123 Show fit | 11.01 |
ENSMUST00000074849.6
ENSMUST00000079534.4 |
transforming, acidic coiled-coil containing protein 3 |
|
chr2_-_170427828 Show fit | 9.29 |
ENSMUST00000013667.2
ENSMUST00000109152.2 ENSMUST00000068137.4 |
breast carcinoma amplified sequence 1 |
|
chr8_+_105518736 Show fit | 9.06 |
ENSMUST00000034363.5
|
hydroxysteroid 11-beta dehydrogenase 2 |
|
chr17_+_48359891 Show fit | 8.93 |
ENSMUST00000024792.6
|
triggering receptor expressed on myeloid cells-like 1 |
|
chr9_+_65101453 Show fit | 8.14 |
ENSMUST00000077696.6
ENSMUST00000035499.4 ENSMUST00000166273.1 |
immunoglobulin superfamily, DCC subclass, member 4 |
|
chr8_+_84901928 Show fit | 7.70 |
ENSMUST00000067060.7
|
Kruppel-like factor 1 (erythroid) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 15.3 | GO:0046852 | positive regulation of bone resorption(GO:0045780) positive regulation of bone remodeling(GO:0046852) |
1.0 | 14.5 | GO:0010216 | maintenance of DNA methylation(GO:0010216) |
0.3 | 12.1 | GO:0006779 | porphyrin-containing compound biosynthetic process(GO:0006779) |
0.1 | 11.2 | GO:0030168 | platelet activation(GO:0030168) |
1.7 | 10.4 | GO:0036515 | serotonergic neuron axon guidance(GO:0036515) |
0.6 | 9.9 | GO:0030953 | astral microtubule organization(GO:0030953) |
3.0 | 9.1 | GO:0002017 | regulation of blood volume by renal aldosterone(GO:0002017) |
1.1 | 8.0 | GO:0060372 | regulation of atrial cardiac muscle cell membrane repolarization(GO:0060372) |
0.5 | 7.7 | GO:0043249 | erythrocyte maturation(GO:0043249) |
1.7 | 6.8 | GO:0021941 | negative regulation of cerebellar granule cell precursor proliferation(GO:0021941) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 22.3 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
0.3 | 17.8 | GO:0000791 | euchromatin(GO:0000791) |
0.0 | 15.1 | GO:0009897 | external side of plasma membrane(GO:0009897) |
0.0 | 14.4 | GO:0000790 | nuclear chromatin(GO:0000790) |
0.0 | 14.3 | GO:0014069 | postsynaptic density(GO:0014069) |
1.7 | 12.1 | GO:0008091 | spectrin(GO:0008091) |
0.0 | 9.4 | GO:0005813 | centrosome(GO:0005813) |
0.4 | 8.9 | GO:0031091 | platelet alpha granule(GO:0031091) |
0.1 | 7.8 | GO:0008076 | voltage-gated potassium channel complex(GO:0008076) |
0.2 | 6.5 | GO:0005891 | voltage-gated calcium channel complex(GO:0005891) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.4 | 14.5 | GO:0031493 | nucleosomal histone binding(GO:0031493) |
0.1 | 12.1 | GO:0033613 | activating transcription factor binding(GO:0033613) |
0.0 | 10.9 | GO:0000976 | transcription regulatory region sequence-specific DNA binding(GO:0000976) |
0.0 | 9.4 | GO:0003714 | transcription corepressor activity(GO:0003714) |
3.0 | 9.1 | GO:0003845 | 11-beta-hydroxysteroid dehydrogenase [NAD(P)] activity(GO:0003845) |
0.2 | 9.0 | GO:0070888 | E-box binding(GO:0070888) |
0.0 | 8.2 | GO:0005096 | GTPase activator activity(GO:0005096) |
0.8 | 8.0 | GO:0086008 | voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization(GO:0086008) |
0.0 | 7.3 | GO:0019902 | phosphatase binding(GO:0019902) |
0.3 | 7.1 | GO:0019956 | chemokine binding(GO:0019956) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 15.3 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.3 | 11.0 | PID AURORA A PATHWAY | Aurora A signaling |
0.2 | 8.4 | ST B CELL ANTIGEN RECEPTOR | B Cell Antigen Receptor |
0.2 | 8.2 | PID IL8 CXCR1 PATHWAY | IL8- and CXCR1-mediated signaling events |
0.1 | 8.2 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.1 | 6.8 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
0.2 | 6.4 | PID LYMPH ANGIOGENESIS PATHWAY | VEGFR3 signaling in lymphatic endothelium |
0.1 | 6.1 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
0.1 | 5.7 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
0.1 | 4.2 | PID AMB2 NEUTROPHILS PATHWAY | amb2 Integrin signaling |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 21.2 | REACTOME ACTIVATED NOTCH1 TRANSMITS SIGNAL TO THE NUCLEUS | Genes involved in Activated NOTCH1 Transmits Signal to the Nucleus |
0.3 | 11.5 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.2 | 8.2 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.0 | 6.9 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.5 | 6.8 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
0.3 | 6.2 | REACTOME ACYL CHAIN REMODELLING OF PG | Genes involved in Acyl chain remodelling of PG |
0.1 | 6.2 | REACTOME MEIOTIC SYNAPSIS | Genes involved in Meiotic Synapsis |
0.2 | 6.1 | REACTOME ANTIGEN ACTIVATES B CELL RECEPTOR LEADING TO GENERATION OF SECOND MESSENGERS | Genes involved in Antigen Activates B Cell Receptor Leading to Generation of Second Messengers |
0.1 | 5.1 | REACTOME O LINKED GLYCOSYLATION OF MUCINS | Genes involved in O-linked glycosylation of mucins |
0.3 | 4.7 | REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION | Genes involved in Apoptosis induced DNA fragmentation |