avrg: GSE58827: Dynamics of the Mouse Liver
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr5_-_53213447 Show fit | 1.51 |
ENSMUST00000031090.6
|
sel-1 suppressor of lin-12-like 3 (C. elegans) |
|
chr4_-_57143437 Show fit | 1.46 |
ENSMUST00000095076.3
ENSMUST00000030142.3 |
erythrocyte protein band 4.1-like 4b |
|
chr4_+_129513581 Show fit | 1.43 |
ENSMUST00000062356.6
|
MARCKS-like 1 |
|
chr17_+_36942910 Show fit | 1.26 |
ENSMUST00000040498.5
|
ring finger protein 39 |
|
chr19_-_4698315 Show fit | 1.19 |
ENSMUST00000096325.3
|
predicted gene 960 |
|
chr4_-_114908892 Show fit | 1.18 |
ENSMUST00000068654.3
|
forkhead box D2 |
|
chr7_-_35215248 Show fit | 1.13 |
ENSMUST00000118444.1
ENSMUST00000122409.1 |
low density lipoprotein receptor-related protein 3 |
|
chr18_+_64340225 Show fit | 1.13 |
ENSMUST00000175965.2
ENSMUST00000115145.3 |
one cut domain, family member 2 |
|
chr7_+_65862029 Show fit | 1.12 |
ENSMUST00000055576.5
ENSMUST00000098391.4 |
proprotein convertase subtilisin/kexin type 6 |
|
chr10_-_114801364 Show fit | 1.10 |
ENSMUST00000061632.7
|
TRH-degrading enzyme |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 1.6 | GO:0042138 | meiotic DNA double-strand break formation(GO:0042138) |
0.2 | 1.5 | GO:0090286 | cytoskeletal anchoring at nuclear membrane(GO:0090286) |
0.2 | 1.4 | GO:1990504 | dense core granule exocytosis(GO:1990504) |
0.0 | 1.3 | GO:0007214 | gamma-aminobutyric acid signaling pathway(GO:0007214) |
0.1 | 1.2 | GO:0097421 | liver regeneration(GO:0097421) |
0.4 | 1.1 | GO:0003167 | atrioventricular bundle cell differentiation(GO:0003167) |
0.2 | 1.1 | GO:0032902 | nerve growth factor production(GO:0032902) |
0.1 | 1.1 | GO:0090503 | RNA phosphodiester bond hydrolysis, exonucleolytic(GO:0090503) |
0.1 | 1.1 | GO:0048934 | peripheral nervous system neuron differentiation(GO:0048934) peripheral nervous system neuron development(GO:0048935) |
0.2 | 1.0 | GO:0031022 | nuclear migration along microfilament(GO:0031022) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.7 | GO:0031901 | early endosome membrane(GO:0031901) |
0.0 | 1.6 | GO:0042734 | presynaptic membrane(GO:0042734) |
0.2 | 1.1 | GO:0038039 | G-protein coupled receptor heterodimeric complex(GO:0038039) |
0.1 | 1.1 | GO:0000177 | cytoplasmic exosome (RNase complex)(GO:0000177) |
0.0 | 1.0 | GO:0016581 | NuRD complex(GO:0016581) CHD-type complex(GO:0090545) |
0.1 | 0.9 | GO:0034992 | microtubule organizing center attachment site(GO:0034992) LINC complex(GO:0034993) |
0.3 | 0.8 | GO:1990667 | PCSK9-AnxA2 complex(GO:1990667) |
0.2 | 0.7 | GO:0036488 | CHOP-C/EBP complex(GO:0036488) |
0.1 | 0.7 | GO:0042612 | MHC class I protein complex(GO:0042612) |
0.0 | 0.7 | GO:0016514 | SWI/SNF complex(GO:0016514) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.5 | GO:0043495 | protein anchor(GO:0043495) |
0.3 | 1.6 | GO:0061505 | DNA topoisomerase type II (ATP-hydrolyzing) activity(GO:0003918) DNA topoisomerase II activity(GO:0061505) |
0.1 | 1.6 | GO:0070006 | metalloaminopeptidase activity(GO:0070006) |
0.2 | 1.1 | GO:0004965 | G-protein coupled GABA receptor activity(GO:0004965) |
0.1 | 1.1 | GO:0048406 | nerve growth factor binding(GO:0048406) |
0.1 | 1.1 | GO:0010314 | phosphatidylinositol-5-phosphate binding(GO:0010314) |
0.0 | 1.1 | GO:0001102 | RNA polymerase II activating transcription factor binding(GO:0001102) |
0.2 | 1.0 | GO:0004104 | cholinesterase activity(GO:0004104) |
0.0 | 1.0 | GO:0000175 | 3'-5'-exoribonuclease activity(GO:0000175) |
0.1 | 0.9 | GO:0070644 | vitamin D response element binding(GO:0070644) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.4 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.0 | 1.2 | PID LKB1 PATHWAY | LKB1 signaling events |
0.0 | 1.1 | PID RETINOIC ACID PATHWAY | Retinoic acid receptors-mediated signaling |
0.0 | 0.6 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
0.0 | 0.6 | PID INTEGRIN5 PATHWAY | Beta5 beta6 beta7 and beta8 integrin cell surface interactions |
0.0 | 0.6 | PID GLYPICAN 1PATHWAY | Glypican 1 network |
0.0 | 0.4 | PID NECTIN PATHWAY | Nectin adhesion pathway |
0.0 | 0.4 | PID SMAD2 3PATHWAY | Regulation of cytoplasmic and nuclear SMAD2/3 signaling |
0.0 | 0.4 | PID ARF6 DOWNSTREAM PATHWAY | Arf6 downstream pathway |
0.0 | 0.4 | PID ERBB1 INTERNALIZATION PATHWAY | Internalization of ErbB1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 1.4 | REACTOME SIGNALING BY NODAL | Genes involved in Signaling by NODAL |
0.1 | 1.3 | REACTOME HS GAG DEGRADATION | Genes involved in HS-GAG degradation |
0.1 | 1.1 | REACTOME CLASS C 3 METABOTROPIC GLUTAMATE PHEROMONE RECEPTORS | Genes involved in Class C/3 (Metabotropic glutamate/pheromone receptors) |
0.1 | 1.0 | REACTOME SYNTHESIS OF PE | Genes involved in Synthesis of PE |
0.0 | 1.0 | REACTOME MEIOTIC SYNAPSIS | Genes involved in Meiotic Synapsis |
0.0 | 0.9 | REACTOME DOWNREGULATION OF TGF BETA RECEPTOR SIGNALING | Genes involved in Downregulation of TGF-beta receptor signaling |
0.0 | 0.9 | REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA | Genes involved in Circadian Repression of Expression by REV-ERBA |
0.0 | 0.8 | REACTOME METAL ION SLC TRANSPORTERS | Genes involved in Metal ion SLC transporters |
0.0 | 0.7 | REACTOME RAF MAP KINASE CASCADE | Genes involved in RAF/MAP kinase cascade |
0.0 | 0.7 | REACTOME AMINE DERIVED HORMONES | Genes involved in Amine-derived hormones |