avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Tfap2e | mm10_v2_chr4_-_126736236_126736245 | 0.06 | 7.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_91945703 Show fit | 2.09 |
ENSMUST00000178895.1
|
predicted gene 9821 |
|
chr7_+_30787897 Show fit | 2.03 |
ENSMUST00000098559.1
|
keratinocyte differentiation associated protein |
|
chr4_-_140774196 Show fit | 1.99 |
ENSMUST00000026381.6
|
peptidyl arginine deiminase, type IV |
|
chr11_-_102897146 Show fit | 1.90 |
ENSMUST00000077902.4
|
glial fibrillary acidic protein |
|
chr12_+_109544498 Show fit | 1.89 |
ENSMUST00000126289.1
|
maternally expressed 3 |
|
chr11_-_102897123 Show fit | 1.89 |
ENSMUST00000067444.3
|
glial fibrillary acidic protein |
|
chr2_+_129228022 Show fit | 1.79 |
ENSMUST00000148548.1
|
RIKEN cDNA A730036I17 gene |
|
chr9_+_110857958 Show fit | 1.36 |
ENSMUST00000051097.1
|
protease, serine, 50 |
|
chr8_+_94152607 Show fit | 1.17 |
ENSMUST00000034211.8
|
metallothionein 3 |
|
chrX_+_93675088 Show fit | 1.00 |
ENSMUST00000045898.3
|
phosphate cytidylyltransferase 1, choline, beta isoform |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 3.8 | GO:0010624 | regulation of Schwann cell proliferation(GO:0010624) |
0.4 | 2.0 | GO:0036414 | protein citrullination(GO:0018101) histone citrullination(GO:0036414) |
0.1 | 1.9 | GO:0008340 | determination of adult lifespan(GO:0008340) |
0.4 | 1.2 | GO:0097212 | lysosomal membrane organization(GO:0097212) |
0.0 | 1.0 | GO:0001541 | ovarian follicle development(GO:0001541) |
0.1 | 0.8 | GO:0090050 | positive regulation of cell migration involved in sprouting angiogenesis(GO:0090050) negative regulation of NIK/NF-kappaB signaling(GO:1901223) |
0.1 | 0.7 | GO:0035795 | negative regulation of mitochondrial membrane permeability(GO:0035795) positive regulation of macromitophagy(GO:1901526) positive regulation of mitophagy in response to mitochondrial depolarization(GO:1904925) |
0.1 | 0.7 | GO:0032483 | regulation of Rab protein signal transduction(GO:0032483) |
0.0 | 0.7 | GO:0071688 | striated muscle myosin thick filament assembly(GO:0071688) |
0.0 | 0.7 | GO:0097091 | synaptic vesicle clustering(GO:0097091) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 3.8 | GO:0097450 | astrocyte end-foot(GO:0097450) |
0.1 | 2.0 | GO:0042599 | lamellar body(GO:0042599) |
0.0 | 0.9 | GO:0005871 | kinesin complex(GO:0005871) |
0.0 | 0.7 | GO:0005859 | muscle myosin complex(GO:0005859) myosin filament(GO:0032982) |
0.0 | 0.7 | GO:0030665 | clathrin-coated vesicle membrane(GO:0030665) |
0.0 | 0.7 | GO:0031901 | early endosome membrane(GO:0031901) |
0.0 | 0.6 | GO:0043196 | varicosity(GO:0043196) |
0.0 | 0.6 | GO:0000242 | pericentriolar material(GO:0000242) |
0.0 | 0.3 | GO:1990584 | cardiac Troponin complex(GO:1990584) |
0.1 | 0.2 | GO:0034774 | secretory granule lumen(GO:0034774) cytoplasmic membrane-bounded vesicle lumen(GO:0060205) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.8 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.4 | 2.0 | GO:0004668 | protein-arginine deiminase activity(GO:0004668) |
0.1 | 1.4 | GO:0070003 | threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003) |
0.2 | 1.0 | GO:0004105 | choline-phosphate cytidylyltransferase activity(GO:0004105) |
0.0 | 1.0 | GO:0032041 | histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) |
0.0 | 0.9 | GO:0032794 | GTPase activating protein binding(GO:0032794) |
0.1 | 0.7 | GO:0019158 | fructokinase activity(GO:0008865) mannokinase activity(GO:0019158) |
0.0 | 0.7 | GO:0017112 | Rab guanyl-nucleotide exchange factor activity(GO:0017112) |
0.1 | 0.6 | GO:0001665 | alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity(GO:0001665) |
0.1 | 0.6 | GO:0030550 | acetylcholine receptor inhibitor activity(GO:0030550) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.4 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
0.0 | 0.3 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.8 | REACTOME NUCLEAR SIGNALING BY ERBB4 | Genes involved in Nuclear signaling by ERBB4 |
0.0 | 1.0 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |
0.0 | 1.0 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.0 | 1.0 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |
0.0 | 0.7 | REACTOME AMINE DERIVED HORMONES | Genes involved in Amine-derived hormones |
0.0 | 0.7 | REACTOME GLUCOSE TRANSPORT | Genes involved in Glucose transport |
0.0 | 0.6 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.0 | 0.3 | REACTOME SPRY REGULATION OF FGF SIGNALING | Genes involved in Spry regulation of FGF signaling |
0.0 | 0.2 | REACTOME PASSIVE TRANSPORT BY AQUAPORINS | Genes involved in Passive Transport by Aquaporins |