avrg: GSE58827: Dynamics of the Mouse Liver
Gene Symbol | Gene ID | Gene Info |
---|---|---|
Tfap2e
|
ENSMUSG00000042477.7 | transcription factor AP-2, epsilon |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Tfap2e | mm10_v2_chr4_-_126736236_126736245 | 0.06 | 7.4e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_91945703 | 2.09 |
ENSMUST00000178895.1
|
Gm9821
|
predicted gene 9821 |
chr7_+_30787897 | 2.03 |
ENSMUST00000098559.1
|
Krtdap
|
keratinocyte differentiation associated protein |
chr4_-_140774196 | 1.99 |
ENSMUST00000026381.6
|
Padi4
|
peptidyl arginine deiminase, type IV |
chr11_-_102897146 | 1.90 |
ENSMUST00000077902.4
|
Gfap
|
glial fibrillary acidic protein |
chr12_+_109544498 | 1.89 |
ENSMUST00000126289.1
|
Meg3
|
maternally expressed 3 |
chr11_-_102897123 | 1.89 |
ENSMUST00000067444.3
|
Gfap
|
glial fibrillary acidic protein |
chr2_+_129228022 | 1.79 |
ENSMUST00000148548.1
|
A730036I17Rik
|
RIKEN cDNA A730036I17 gene |
chr9_+_110857958 | 1.36 |
ENSMUST00000051097.1
|
Prss50
|
protease, serine, 50 |
chr8_+_94152607 | 1.17 |
ENSMUST00000034211.8
|
Mt3
|
metallothionein 3 |
chrX_+_93675088 | 1.00 |
ENSMUST00000045898.3
|
Pcyt1b
|
phosphate cytidylyltransferase 1, choline, beta isoform |
chr3_+_152165374 | 0.87 |
ENSMUST00000181854.1
|
D630002J18Rik
|
RIKEN cDNA D630002J18 gene |
chr1_+_136131382 | 0.87 |
ENSMUST00000075164.4
|
Kif21b
|
kinesin family member 21B |
chr2_-_34754364 | 0.86 |
ENSMUST00000142436.1
ENSMUST00000113099.3 ENSMUST00000028224.8 |
Gapvd1
|
GTPase activating protein and VPS9 domains 1 |
chr15_-_97831460 | 0.76 |
ENSMUST00000079838.7
ENSMUST00000118294.1 |
Hdac7
|
histone deacetylase 7 |
chr7_-_44524642 | 0.73 |
ENSMUST00000165208.2
|
Mybpc2
|
myosin binding protein C, fast-type |
chr2_-_38287174 | 0.69 |
ENSMUST00000130472.1
|
Dennd1a
|
DENN/MADD domain containing 1A |
chr6_-_82774448 | 0.68 |
ENSMUST00000000642.4
|
Hk2
|
hexokinase 2 |
chr3_-_153725062 | 0.65 |
ENSMUST00000064460.5
|
St6galnac3
|
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 |
chr8_+_41239718 | 0.59 |
ENSMUST00000045218.7
|
Pcm1
|
pericentriolar material 1 |
chr7_+_24636566 | 0.58 |
ENSMUST00000080718.4
|
Lypd3
|
Ly6/Plaur domain containing 3 |
chr11_+_98386450 | 0.56 |
ENSMUST00000041301.7
|
Pnmt
|
phenylethanolamine-N-methyltransferase |
chr1_-_125913101 | 0.55 |
ENSMUST00000161361.1
|
Lypd1
|
Ly6/Plaur domain containing 1 |
chr11_+_101260569 | 0.55 |
ENSMUST00000103108.1
|
Wnk4
|
WNK lysine deficient protein kinase 4 |
chr9_-_44454757 | 0.54 |
ENSMUST00000047740.2
|
Upk2
|
uroplakin 2 |
chr9_-_97111117 | 0.54 |
ENSMUST00000085206.4
|
Slc25a36
|
solute carrier family 25, member 36 |
chr13_+_37825975 | 0.51 |
ENSMUST00000138043.1
|
Rreb1
|
ras responsive element binding protein 1 |
chr2_-_129297205 | 0.45 |
ENSMUST00000052708.6
|
Ckap2l
|
cytoskeleton associated protein 2-like |
chr10_-_127211528 | 0.40 |
ENSMUST00000013970.7
|
Pip4k2c
|
phosphatidylinositol-5-phosphate 4-kinase, type II, gamma |
chr8_+_109705549 | 0.39 |
ENSMUST00000034163.8
|
Zfp821
|
zinc finger protein 821 |
chr2_+_149830788 | 0.38 |
ENSMUST00000109935.1
|
Syndig1
|
synapse differentiation inducing 1 |
chr2_+_149830840 | 0.31 |
ENSMUST00000109934.1
ENSMUST00000140870.1 |
Syndig1
|
synapse differentiation inducing 1 |
chr17_-_35697971 | 0.29 |
ENSMUST00000146472.1
|
Ddr1
|
discoidin domain receptor family, member 1 |
chr4_+_148039097 | 0.29 |
ENSMUST00000141283.1
|
Mthfr
|
5,10-methylenetetrahydrofolate reductase |
chr1_+_135836380 | 0.28 |
ENSMUST00000178204.1
|
Tnnt2
|
troponin T2, cardiac |
chr15_-_102524615 | 0.27 |
ENSMUST00000023814.7
|
Npff
|
neuropeptide FF-amide peptide precursor |
chr8_-_84687839 | 0.25 |
ENSMUST00000001975.4
|
Nacc1
|
nucleus accumbens associated 1, BEN and BTB (POZ) domain containing |
chr3_-_84040151 | 0.24 |
ENSMUST00000052342.7
|
D930015E06Rik
|
RIKEN cDNA D930015E06 gene |
chr15_+_99591028 | 0.24 |
ENSMUST00000169082.1
|
Aqp5
|
aquaporin 5 |
chr16_+_93832121 | 0.24 |
ENSMUST00000044068.6
|
Morc3
|
microrchidia 3 |
chr6_-_39725448 | 0.24 |
ENSMUST00000002487.8
|
Braf
|
Braf transforming gene |
chr7_+_141447645 | 0.21 |
ENSMUST00000106004.1
ENSMUST00000106003.1 |
Rplp2
|
ribosomal protein, large P2 |
chr2_+_22895583 | 0.20 |
ENSMUST00000152170.1
|
Pdss1
|
prenyl (solanesyl) diphosphate synthase, subunit 1 |
chr3_+_103914560 | 0.19 |
ENSMUST00000106806.1
|
Rsbn1
|
rosbin, round spermatid basic protein 1 |
chr11_-_102218923 | 0.19 |
ENSMUST00000131254.1
|
Hdac5
|
histone deacetylase 5 |
chr5_-_113908685 | 0.19 |
ENSMUST00000004646.6
|
Coro1c
|
coronin, actin binding protein 1C |
chr9_+_109931774 | 0.18 |
ENSMUST00000169851.2
|
Map4
|
microtubule-associated protein 4 |
chr17_-_63863791 | 0.17 |
ENSMUST00000050753.3
|
A930002H24Rik
|
RIKEN cDNA A930002H24 gene |
chr13_+_37826018 | 0.16 |
ENSMUST00000110238.2
|
Rreb1
|
ras responsive element binding protein 1 |
chr2_+_27165233 | 0.16 |
ENSMUST00000000910.6
|
Dbh
|
dopamine beta hydroxylase |
chr11_-_3371307 | 0.14 |
ENSMUST00000101642.3
ENSMUST00000101640.3 |
Limk2
|
LIM motif-containing protein kinase 2 |
chr7_-_45333754 | 0.14 |
ENSMUST00000042194.8
|
Trpm4
|
transient receptor potential cation channel, subfamily M, member 4 |
chr10_+_112083345 | 0.14 |
ENSMUST00000148897.1
ENSMUST00000020434.3 |
Glipr1l2
|
GLI pathogenesis-related 1 like 2 |
chr7_+_81057589 | 0.14 |
ENSMUST00000107348.1
|
Alpk3
|
alpha-kinase 3 |
chr8_+_33386325 | 0.12 |
ENSMUST00000078058.3
ENSMUST00000070340.4 |
Purg
|
purine-rich element binding protein G |
chr1_+_159737510 | 0.11 |
ENSMUST00000111669.3
|
Tnr
|
tenascin R |
chr5_-_117389029 | 0.11 |
ENSMUST00000111953.1
ENSMUST00000086461.6 |
Rfc5
|
replication factor C (activator 1) 5 |
chr2_+_9882622 | 0.11 |
ENSMUST00000114919.1
|
4930412O13Rik
|
RIKEN cDNA 4930412O13 gene |
chr6_-_39725193 | 0.11 |
ENSMUST00000101497.3
|
Braf
|
Braf transforming gene |
chr1_+_74771886 | 0.10 |
ENSMUST00000006716.6
|
Wnt6
|
wingless-related MMTV integration site 6 |
chrX_+_73716712 | 0.09 |
ENSMUST00000114461.2
|
Abcd1
|
ATP-binding cassette, sub-family D (ALD), member 1 |
chr1_+_86154752 | 0.08 |
ENSMUST00000113309.2
ENSMUST00000027434.8 ENSMUST00000131412.1 |
Armc9
|
armadillo repeat containing 9 |
chr9_+_108953578 | 0.07 |
ENSMUST00000112070.1
|
Col7a1
|
collagen, type VII, alpha 1 |
chr19_+_42518795 | 0.07 |
ENSMUST00000160107.1
ENSMUST00000160893.1 |
R3hcc1l
|
R3H domain and coiled-coil containing 1 like |
chr15_+_58872646 | 0.05 |
ENSMUST00000036937.7
|
Trmt12
|
tRNA methyltranferase 12 |
chr14_+_51451962 | 0.05 |
ENSMUST00000159611.1
ENSMUST00000159734.1 |
Vmn2r89
|
vomeronasal 2, receptor 89 |
chr8_+_107293500 | 0.04 |
ENSMUST00000151114.1
ENSMUST00000075922.4 ENSMUST00000125721.1 |
Nfat5
|
nuclear factor of activated T cells 5 |
chr11_-_100248902 | 0.04 |
ENSMUST00000007280.8
|
Krt16
|
keratin 16 |
chr9_-_121759788 | 0.04 |
ENSMUST00000181325.1
|
E530011L22Rik
|
RIKEN cDNA E530011L22 gene |
chr8_-_111854278 | 0.03 |
ENSMUST00000034432.5
|
Cfdp1
|
craniofacial development protein 1 |
chr9_+_108953597 | 0.03 |
ENSMUST00000026740.5
|
Col7a1
|
collagen, type VII, alpha 1 |
chr4_+_156331103 | 0.02 |
ENSMUST00000074107.6
ENSMUST00000096792.5 |
Vmn2r-ps159
|
vomeronasal 2, receptor, pseudogene 159 |
chr7_-_116443439 | 0.02 |
ENSMUST00000170430.1
|
Pik3c2a
|
phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide |
chr9_-_44735189 | 0.02 |
ENSMUST00000034611.8
|
Phldb1
|
pleckstrin homology-like domain, family B, member 1 |
chr9_-_110117379 | 0.01 |
ENSMUST00000111991.2
ENSMUST00000149199.1 ENSMUST00000035056.7 ENSMUST00000148287.1 ENSMUST00000127744.1 |
Dhx30
|
DEAH (Asp-Glu-Ala-His) box polypeptide 30 |
chr8_+_107293463 | 0.00 |
ENSMUST00000169453.1
|
Nfat5
|
nuclear factor of activated T cells 5 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 3.8 | GO:0010624 | regulation of Schwann cell proliferation(GO:0010624) |
0.4 | 2.0 | GO:0036414 | protein citrullination(GO:0018101) histone citrullination(GO:0036414) |
0.4 | 1.2 | GO:0097212 | lysosomal membrane organization(GO:0097212) |
0.1 | 0.7 | GO:0035795 | negative regulation of mitochondrial membrane permeability(GO:0035795) positive regulation of macromitophagy(GO:1901526) positive regulation of mitophagy in response to mitochondrial depolarization(GO:1904925) |
0.1 | 0.7 | GO:0032483 | regulation of Rab protein signal transduction(GO:0032483) |
0.1 | 0.6 | GO:0042414 | epinephrine metabolic process(GO:0042414) |
0.1 | 0.3 | GO:0032972 | regulation of muscle filament sliding speed(GO:0032972) |
0.1 | 0.6 | GO:0035735 | intraciliary transport involved in cilium morphogenesis(GO:0035735) |
0.1 | 0.4 | GO:0072531 | pyrimidine-containing compound transmembrane transport(GO:0072531) |
0.1 | 0.5 | GO:1903691 | positive regulation of wound healing, spreading of epidermal cells(GO:1903691) |
0.1 | 0.3 | GO:0070829 | heterochromatin maintenance(GO:0070829) |
0.1 | 0.6 | GO:0070294 | renal sodium ion absorption(GO:0070294) negative regulation of pancreatic juice secretion(GO:0090188) |
0.1 | 1.9 | GO:0008340 | determination of adult lifespan(GO:0008340) |
0.1 | 0.2 | GO:0046333 | octopamine biosynthetic process(GO:0006589) octopamine metabolic process(GO:0046333) |
0.1 | 0.8 | GO:0090050 | positive regulation of cell migration involved in sprouting angiogenesis(GO:0090050) negative regulation of NIK/NF-kappaB signaling(GO:1901223) |
0.0 | 0.1 | GO:1903116 | membrane depolarization during Purkinje myocyte cell action potential(GO:0086047) positive regulation of actin filament-based movement(GO:1903116) |
0.0 | 0.7 | GO:0071688 | striated muscle myosin thick filament assembly(GO:0071688) |
0.0 | 0.3 | GO:2000301 | negative regulation of synaptic vesicle exocytosis(GO:2000301) |
0.0 | 0.4 | GO:2000786 | positive regulation of autophagosome assembly(GO:2000786) |
0.0 | 0.3 | GO:0070253 | somatostatin secretion(GO:0070253) |
0.0 | 0.2 | GO:0051012 | microtubule sliding(GO:0051012) |
0.0 | 0.7 | GO:0097091 | synaptic vesicle clustering(GO:0097091) |
0.0 | 0.2 | GO:0015670 | carbon dioxide transport(GO:0015670) |
0.0 | 0.3 | GO:0061302 | smooth muscle cell-matrix adhesion(GO:0061302) |
0.0 | 0.1 | GO:0048690 | neuron cell-cell adhesion(GO:0007158) regulation of sprouting of injured axon(GO:0048686) regulation of axon extension involved in regeneration(GO:0048690) |
0.0 | 0.6 | GO:0006677 | glycosylceramide metabolic process(GO:0006677) |
0.0 | 0.2 | GO:2000394 | positive regulation of lamellipodium morphogenesis(GO:2000394) |
0.0 | 0.1 | GO:0070172 | positive regulation of tooth mineralization(GO:0070172) |
0.0 | 0.6 | GO:1905145 | acetylcholine receptor signaling pathway(GO:0095500) signal transduction involved in cellular response to ammonium ion(GO:1903831) response to acetylcholine(GO:1905144) cellular response to acetylcholine(GO:1905145) |
0.0 | 0.2 | GO:0048742 | regulation of skeletal muscle fiber development(GO:0048742) |
0.0 | 1.0 | GO:0001541 | ovarian follicle development(GO:0001541) |
0.0 | 0.1 | GO:1900264 | regulation of DNA-directed DNA polymerase activity(GO:1900262) positive regulation of DNA-directed DNA polymerase activity(GO:1900264) |
0.0 | 0.2 | GO:0006744 | ubiquinone biosynthetic process(GO:0006744) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 3.8 | GO:0097450 | astrocyte end-foot(GO:0097450) |
0.1 | 2.0 | GO:0042599 | lamellar body(GO:0042599) |
0.1 | 0.2 | GO:0034774 | secretory granule lumen(GO:0034774) cytoplasmic membrane-bounded vesicle lumen(GO:0060205) |
0.0 | 0.3 | GO:1990584 | cardiac Troponin complex(GO:1990584) |
0.0 | 0.1 | GO:0072534 | perineuronal net(GO:0072534) |
0.0 | 0.7 | GO:0005859 | muscle myosin complex(GO:0005859) myosin filament(GO:0032982) |
0.0 | 0.6 | GO:0043196 | varicosity(GO:0043196) |
0.0 | 0.6 | GO:0000242 | pericentriolar material(GO:0000242) |
0.0 | 0.2 | GO:0090571 | RNA polymerase II transcription repressor complex(GO:0090571) |
0.0 | 0.1 | GO:0005663 | DNA replication factor C complex(GO:0005663) |
0.0 | 0.7 | GO:0030665 | clathrin-coated vesicle membrane(GO:0030665) |
0.0 | 0.2 | GO:0016600 | flotillin complex(GO:0016600) |
0.0 | 0.9 | GO:0005871 | kinesin complex(GO:0005871) |
0.0 | 0.7 | GO:0031901 | early endosome membrane(GO:0031901) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 2.0 | GO:0004668 | protein-arginine deiminase activity(GO:0004668) |
0.2 | 1.0 | GO:0004105 | choline-phosphate cytidylyltransferase activity(GO:0004105) |
0.1 | 0.4 | GO:0016309 | 1-phosphatidylinositol-5-phosphate 4-kinase activity(GO:0016309) |
0.1 | 0.3 | GO:0004489 | methylenetetrahydrofolate reductase (NAD(P)H) activity(GO:0004489) |
0.1 | 0.7 | GO:0019158 | fructokinase activity(GO:0008865) mannokinase activity(GO:0019158) |
0.1 | 0.6 | GO:0001665 | alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity(GO:0001665) |
0.1 | 0.6 | GO:0030550 | acetylcholine receptor inhibitor activity(GO:0030550) |
0.1 | 1.4 | GO:0070003 | threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003) |
0.1 | 0.2 | GO:0004500 | dopamine beta-monooxygenase activity(GO:0004500) |
0.1 | 0.2 | GO:0000010 | trans-hexaprenyltranstransferase activity(GO:0000010) trans-octaprenyltranstransferase activity(GO:0050347) |
0.0 | 0.6 | GO:0019869 | chloride channel inhibitor activity(GO:0019869) |
0.0 | 4.8 | GO:0005200 | structural constituent of cytoskeleton(GO:0005200) |
0.0 | 1.0 | GO:0032041 | histone deacetylase activity (H3-K14 specific)(GO:0031078) NAD-dependent histone deacetylase activity (H3-K14 specific)(GO:0032041) |
0.0 | 0.9 | GO:0032794 | GTPase activating protein binding(GO:0032794) |
0.0 | 0.3 | GO:0038062 | protein tyrosine kinase collagen receptor activity(GO:0038062) |
0.0 | 0.2 | GO:0015250 | water channel activity(GO:0015250) |
0.0 | 0.6 | GO:0043236 | laminin binding(GO:0043236) |
0.0 | 0.7 | GO:0017112 | Rab guanyl-nucleotide exchange factor activity(GO:0017112) |
0.0 | 0.4 | GO:0015215 | nucleotide transmembrane transporter activity(GO:0015215) |
0.0 | 0.3 | GO:0004709 | MAP kinase kinase kinase activity(GO:0004709) |
0.0 | 0.3 | GO:0005184 | neuropeptide hormone activity(GO:0005184) |
0.0 | 0.1 | GO:0033170 | DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 0.3 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
0.0 | 1.4 | PID HIF1 TFPATHWAY | HIF-1-alpha transcription factor network |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.8 | REACTOME NUCLEAR SIGNALING BY ERBB4 | Genes involved in Nuclear signaling by ERBB4 |
0.0 | 0.7 | REACTOME AMINE DERIVED HORMONES | Genes involved in Amine-derived hormones |
0.0 | 1.0 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |
0.0 | 0.6 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.0 | 0.2 | REACTOME PASSIVE TRANSPORT BY AQUAPORINS | Genes involved in Passive Transport by Aquaporins |
0.0 | 1.0 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.0 | 0.3 | REACTOME SPRY REGULATION OF FGF SIGNALING | Genes involved in Spry regulation of FGF signaling |
0.0 | 1.0 | REACTOME NOTCH1 INTRACELLULAR DOMAIN REGULATES TRANSCRIPTION | Genes involved in NOTCH1 Intracellular Domain Regulates Transcription |
0.0 | 0.7 | REACTOME GLUCOSE TRANSPORT | Genes involved in Glucose transport |