avrg: GSE58827: Dynamics of the Mouse Liver
Gene Symbol | Gene ID | Gene Info |
---|---|---|
ENSMUSG00000062175.7 | TGFB-induced factor homeobox 2 | |
ENSMUSG00000061283.4 | TGFB-induced factor homeobox 2-like, X-linked 1 | |
ENSMUSG00000063242.6 | TGFB-induced factor homeobox 2-like, X-linked 2 |
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Tgif2 | mm10_v2_chr2_+_156840077_156840141 | 0.72 | 8.5e-07 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_+_19411086 Show fit | 6.84 |
ENSMUST00000003643.1
|
creatine kinase, muscle |
|
chr5_-_100159261 Show fit | 6.59 |
ENSMUST00000139520.1
|
transmembrane protein 150C |
|
chr13_+_54701457 Show fit | 4.91 |
ENSMUST00000037145.7
|
cadherin-related family member 2 |
|
chr2_-_84822546 Show fit | 4.71 |
ENSMUST00000028471.5
|
smoothelin-like 1 |
|
chr11_+_115877497 Show fit | 3.54 |
ENSMUST00000144032.1
|
myosin XVB |
|
chr11_-_87108656 Show fit | 3.23 |
ENSMUST00000051395.8
|
proline rich 11 |
|
chr13_+_108316395 Show fit | 3.18 |
ENSMUST00000171178.1
|
DEP domain containing 1B |
|
chr13_+_108316332 Show fit | 3.10 |
ENSMUST00000051594.5
|
DEP domain containing 1B |
|
chr8_-_122460666 Show fit | 2.83 |
ENSMUST00000006762.5
|
snail homolog 3 (Drosophila) |
|
chr15_+_85510812 Show fit | 2.61 |
ENSMUST00000079690.2
|
predicted pseudogene 4825 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.1 | GO:0042398 | cellular modified amino acid biosynthetic process(GO:0042398) |
0.0 | 5.4 | GO:0030177 | positive regulation of Wnt signaling pathway(GO:0030177) |
0.5 | 4.9 | GO:0060242 | contact inhibition(GO:0060242) |
0.2 | 4.7 | GO:0014823 | response to activity(GO:0014823) |
0.1 | 3.7 | GO:0050901 | leukocyte tethering or rolling(GO:0050901) |
0.5 | 3.2 | GO:1904180 | negative regulation of membrane depolarization(GO:1904180) |
0.0 | 3.2 | GO:0007050 | cell cycle arrest(GO:0007050) |
0.2 | 2.6 | GO:2000042 | negative regulation of double-strand break repair via homologous recombination(GO:2000042) |
0.2 | 2.5 | GO:0045719 | negative regulation of glycogen biosynthetic process(GO:0045719) |
0.1 | 2.4 | GO:2000096 | positive regulation of Wnt signaling pathway, planar cell polarity pathway(GO:2000096) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.7 | GO:0031430 | M band(GO:0031430) |
0.0 | 2.6 | GO:0008023 | transcription elongation factor complex(GO:0008023) |
0.0 | 2.3 | GO:0005903 | brush border(GO:0005903) |
0.1 | 2.1 | GO:0090665 | dystrophin-associated glycoprotein complex(GO:0016010) glycoprotein complex(GO:0090665) |
0.0 | 1.9 | GO:0005793 | endoplasmic reticulum-Golgi intermediate compartment(GO:0005793) |
0.2 | 1.8 | GO:0031390 | Ctf18 RFC-like complex(GO:0031390) |
0.0 | 1.6 | GO:0072686 | mitotic spindle(GO:0072686) |
0.2 | 1.4 | GO:0031262 | Ndc80 complex(GO:0031262) |
0.1 | 1.4 | GO:0000940 | condensed chromosome outer kinetochore(GO:0000940) |
0.2 | 1.3 | GO:0031298 | replication fork protection complex(GO:0031298) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.4 | GO:0005096 | GTPase activator activity(GO:0005096) |
1.1 | 6.8 | GO:0004111 | creatine kinase activity(GO:0004111) |
0.2 | 4.7 | GO:0005523 | tropomyosin binding(GO:0005523) |
0.3 | 3.2 | GO:0071253 | connexin binding(GO:0071253) |
0.2 | 2.0 | GO:0042609 | CD4 receptor binding(GO:0042609) |
0.1 | 1.9 | GO:0005092 | GDP-dissociation inhibitor activity(GO:0005092) |
0.2 | 1.8 | GO:0033170 | DNA clamp loader activity(GO:0003689) protein-DNA loading ATPase activity(GO:0033170) |
0.4 | 1.6 | GO:0003938 | IMP dehydrogenase activity(GO:0003938) |
0.5 | 1.4 | GO:0017153 | sodium:dicarboxylate symporter activity(GO:0017153) |
0.1 | 1.4 | GO:0001609 | G-protein coupled adenosine receptor activity(GO:0001609) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.8 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
0.1 | 2.4 | PID PDGFRA PATHWAY | PDGFR-alpha signaling pathway |
0.0 | 1.7 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.0 | 1.4 | PID FAK PATHWAY | Signaling events mediated by focal adhesion kinase |
0.0 | 1.3 | PID IL27 PATHWAY | IL27-mediated signaling events |
0.0 | 1.3 | PID ATR PATHWAY | ATR signaling pathway |
0.0 | 0.8 | ST STAT3 PATHWAY | STAT3 Pathway |
0.0 | 0.8 | PID ARF6 PATHWAY | Arf6 signaling events |
0.0 | 0.8 | PID IL1 PATHWAY | IL1-mediated signaling events |
0.0 | 0.5 | PID IL3 PATHWAY | IL3-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.8 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.0 | 4.3 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.0 | 3.2 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.0 | 2.1 | REACTOME STRIATED MUSCLE CONTRACTION | Genes involved in Striated Muscle Contraction |
0.1 | 1.6 | REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS | Genes involved in Purine ribonucleoside monophosphate biosynthesis |
0.1 | 1.4 | REACTOME BILE SALT AND ORGANIC ANION SLC TRANSPORTERS | Genes involved in Bile salt and organic anion SLC transporters |
0.1 | 1.4 | REACTOME NUCLEOTIDE LIKE PURINERGIC RECEPTORS | Genes involved in Nucleotide-like (purinergic) receptors |
0.0 | 1.2 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.0 | 1.1 | REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS | Genes involved in Termination of O-glycan biosynthesis |
0.0 | 0.9 | REACTOME PECAM1 INTERACTIONS | Genes involved in PECAM1 interactions |