avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Thra | mm10_v2_chr11_+_98741805_98741816 | 0.47 | 4.1e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chrX_-_7967817 Show fit | 5.97 |
ENSMUST00000033502.7
|
GATA binding protein 1 |
|
chr9_-_44288535 Show fit | 4.20 |
ENSMUST00000161354.1
|
ATP-binding cassette, sub-family G (WHITE), member 4 |
|
chr9_+_111019284 Show fit | 4.02 |
ENSMUST00000035077.3
|
lactotransferrin |
|
chr9_-_44288332 Show fit | 3.26 |
ENSMUST00000161408.1
|
ATP-binding cassette, sub-family G (WHITE), member 4 |
|
chrX_-_102252154 Show fit | 2.99 |
ENSMUST00000050551.3
|
Cbp/p300-interacting transactivator with Glu/Asp-rich carboxy-terminal domain 1 |
|
chr2_-_84822546 Show fit | 2.84 |
ENSMUST00000028471.5
|
smoothelin-like 1 |
|
chr4_+_44300876 Show fit | 2.81 |
ENSMUST00000045607.5
|
maternal embryonic leucine zipper kinase |
|
chr13_+_95696851 Show fit | 2.77 |
ENSMUST00000022182.4
|
coagulation factor II (thrombin) receptor-like 2 |
|
chr11_-_70255329 Show fit | 2.74 |
ENSMUST00000108574.2
ENSMUST00000000329.2 |
arachidonate 12-lipoxygenase |
|
chr9_-_44288131 Show fit | 2.71 |
ENSMUST00000160384.1
|
ATP-binding cassette, sub-family G (WHITE), member 4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.4 | GO:0033344 | cholesterol efflux(GO:0033344) |
2.0 | 6.0 | GO:0030221 | basophil differentiation(GO:0030221) |
0.7 | 4.0 | GO:1902732 | antifungal humoral response(GO:0019732) positive regulation of chondrocyte proliferation(GO:1902732) |
1.2 | 3.6 | GO:0032690 | negative regulation of interleukin-1 alpha production(GO:0032690) negative regulation of integrin activation(GO:0033624) negative regulation of interleukin-1 alpha secretion(GO:0050712) regulation of matrix metallopeptidase secretion(GO:1904464) matrix metallopeptidase secretion(GO:1990773) positive regulation of ovarian follicle development(GO:2000386) regulation of antral ovarian follicle growth(GO:2000387) positive regulation of antral ovarian follicle growth(GO:2000388) negative regulation of eosinophil migration(GO:2000417) |
0.0 | 3.6 | GO:0006611 | protein export from nucleus(GO:0006611) |
0.2 | 3.3 | GO:0051574 | positive regulation of histone H3-K9 methylation(GO:0051574) |
0.6 | 3.0 | GO:0071105 | response to interleukin-9(GO:0071104) response to interleukin-11(GO:0071105) |
0.1 | 3.0 | GO:0000028 | ribosomal small subunit assembly(GO:0000028) |
0.2 | 2.8 | GO:0070493 | thrombin receptor signaling pathway(GO:0070493) |
0.1 | 2.8 | GO:0014823 | response to activity(GO:0014823) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 6.1 | GO:0017053 | transcriptional repressor complex(GO:0017053) |
1.0 | 4.0 | GO:0044279 | other organism cell membrane(GO:0044218) other organism membrane(GO:0044279) |
0.1 | 4.0 | GO:0022627 | cytosolic small ribosomal subunit(GO:0022627) |
0.0 | 3.9 | GO:0005643 | nuclear pore(GO:0005643) |
0.1 | 3.3 | GO:0035098 | ESC/E(Z) complex(GO:0035098) |
0.1 | 3.2 | GO:0016327 | apicolateral plasma membrane(GO:0016327) |
0.1 | 3.2 | GO:0031430 | M band(GO:0031430) |
0.2 | 2.6 | GO:0098643 | fibrillar collagen trimer(GO:0005583) banded collagen fibril(GO:0098643) |
0.0 | 2.5 | GO:0000922 | spindle pole(GO:0000922) |
0.2 | 2.3 | GO:0042629 | mast cell granule(GO:0042629) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.5 | 10.2 | GO:0034041 | sterol-transporting ATPase activity(GO:0034041) |
0.4 | 6.0 | GO:0008301 | DNA binding, bending(GO:0008301) |
0.1 | 4.0 | GO:0001530 | lipopolysaccharide binding(GO:0001530) |
0.1 | 3.9 | GO:0050699 | WW domain binding(GO:0050699) |
0.0 | 3.9 | GO:0004725 | protein tyrosine phosphatase activity(GO:0004725) |
0.5 | 3.6 | GO:0004957 | prostaglandin E receptor activity(GO:0004957) |
0.4 | 3.6 | GO:0005049 | nuclear export signal receptor activity(GO:0005049) |
0.1 | 3.3 | GO:0032452 | histone demethylase activity(GO:0032452) |
0.2 | 3.0 | GO:0050693 | LBD domain binding(GO:0050693) |
0.7 | 2.8 | GO:0015057 | thrombin receptor activity(GO:0015057) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 5.2 | PID HDAC CLASSII PATHWAY | Signaling events mediated by HDAC Class II |
0.1 | 3.3 | PID ATM PATHWAY | ATM pathway |
0.0 | 3.0 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
0.1 | 2.8 | PID THROMBIN PAR4 PATHWAY | PAR4-mediated thrombin signaling events |
0.3 | 2.7 | SA G2 AND M PHASES | Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition. |
0.0 | 2.6 | NABA COLLAGENS | Genes encoding collagen proteins |
0.1 | 2.3 | NABA PROTEOGLYCANS | Genes encoding proteoglycans |
0.0 | 1.8 | PID RB 1PATHWAY | Regulation of retinoblastoma protein |
0.1 | 1.7 | PID PRL SIGNALING EVENTS PATHWAY | Signaling events mediated by PRL |
0.0 | 1.0 | PID EPO PATHWAY | EPO signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 8.2 | REACTOME ABCA TRANSPORTERS IN LIPID HOMEOSTASIS | Genes involved in ABCA transporters in lipid homeostasis |
0.0 | 5.3 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.1 | 4.5 | REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS | Genes involved in Latent infection of Homo sapiens with Mycobacterium tuberculosis |
0.3 | 3.6 | REACTOME PROSTANOID LIGAND RECEPTORS | Genes involved in Prostanoid ligand receptors |
0.1 | 3.3 | REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX | Genes involved in Formation of the ternary complex, and subsequently, the 43S complex |
0.3 | 3.2 | REACTOME REGULATION OF THE FANCONI ANEMIA PATHWAY | Genes involved in Regulation of the Fanconi anemia pathway |
0.1 | 3.2 | REACTOME TIGHT JUNCTION INTERACTIONS | Genes involved in Tight junction interactions |
0.0 | 3.1 | REACTOME RESPONSE TO ELEVATED PLATELET CYTOSOLIC CA2 | Genes involved in Response to elevated platelet cytosolic Ca2+ |
0.1 | 2.8 | REACTOME THROMBIN SIGNALLING THROUGH PROTEINASE ACTIVATED RECEPTORS PARS | Genes involved in Thrombin signalling through proteinase activated receptors (PARs) |
0.2 | 2.7 | REACTOME CYCLIN A B1 ASSOCIATED EVENTS DURING G2 M TRANSITION | Genes involved in Cyclin A/B1 associated events during G2/M transition |