avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Thrb | mm10_v2_chr14_+_17981633_17981644 | 0.53 | 9.7e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr3_+_14863495 Show fit | 17.54 |
ENSMUST00000029076.4
|
carbonic anhydrase 3 |
|
chr7_+_25897620 Show fit | 14.88 |
ENSMUST00000072438.6
ENSMUST00000005477.5 |
cytochrome P450, family 2, subfamily b, polypeptide 10 |
|
chr8_+_105048592 Show fit | 14.84 |
ENSMUST00000093222.5
ENSMUST00000093223.3 |
carboxylesterase 3A |
|
chr17_+_36942910 Show fit | 13.67 |
ENSMUST00000040498.5
|
ring finger protein 39 |
|
chr14_-_34355383 Show fit | 12.38 |
ENSMUST00000052126.5
|
family with sequence similarity 25, member C |
|
chr17_+_36943025 Show fit | 12.12 |
ENSMUST00000173072.1
|
ring finger protein 39 |
|
chr2_-_24049389 Show fit | 7.49 |
ENSMUST00000051416.5
|
histamine N-methyltransferase |
|
chr9_+_44673227 Show fit | 7.24 |
ENSMUST00000034609.4
ENSMUST00000071219.5 |
trehalase (brush-border membrane glycoprotein) |
|
chr11_-_113709520 Show fit | 6.94 |
ENSMUST00000173655.1
ENSMUST00000100248.4 |
cleavage and polyadenylation specific factor 4-like |
|
chr10_+_87521920 Show fit | 6.88 |
ENSMUST00000142088.1
|
phenylalanine hydroxylase |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.4 | 17.5 | GO:0006730 | one-carbon metabolic process(GO:0006730) |
2.1 | 14.9 | GO:0042738 | exogenous drug catabolic process(GO:0042738) |
1.1 | 13.5 | GO:0098789 | pre-mRNA cleavage required for polyadenylation(GO:0098789) |
3.9 | 11.8 | GO:0006571 | tyrosine biosynthetic process(GO:0006571) aromatic amino acid family biosynthetic process(GO:0009073) aromatic amino acid family biosynthetic process, prephenate pathway(GO:0009095) |
2.2 | 10.9 | GO:2000255 | negative regulation of male germ cell proliferation(GO:2000255) |
1.5 | 7.5 | GO:0001692 | histamine metabolic process(GO:0001692) |
1.4 | 7.2 | GO:0005984 | disaccharide metabolic process(GO:0005984) |
1.3 | 6.5 | GO:0015886 | heme transport(GO:0015886) |
0.4 | 6.3 | GO:0016127 | cholesterol catabolic process(GO:0006707) sterol catabolic process(GO:0016127) |
0.3 | 5.6 | GO:0006957 | complement activation, alternative pathway(GO:0006957) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 33.4 | GO:0005783 | endoplasmic reticulum(GO:0005783) |
0.6 | 13.5 | GO:0005847 | mRNA cleavage and polyadenylation specificity factor complex(GO:0005847) |
0.1 | 10.9 | GO:0005791 | rough endoplasmic reticulum(GO:0005791) |
0.0 | 7.4 | GO:0072562 | blood microparticle(GO:0072562) |
0.0 | 7.2 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.5 | 5.6 | GO:0005579 | membrane attack complex(GO:0005579) |
0.1 | 4.9 | GO:0048770 | melanosome(GO:0042470) pigment granule(GO:0048770) |
0.0 | 3.2 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.5 | 17.5 | GO:0016151 | nickel cation binding(GO:0016151) |
0.5 | 14.9 | GO:0070330 | aromatase activity(GO:0070330) |
0.1 | 14.8 | GO:0052689 | carboxylic ester hydrolase activity(GO:0052689) |
0.2 | 13.5 | GO:0004521 | endoribonuclease activity(GO:0004521) |
2.4 | 11.8 | GO:0004505 | phenylalanine 4-monooxygenase activity(GO:0004505) |
2.7 | 10.9 | GO:0004667 | prostaglandin-D synthase activity(GO:0004667) |
0.1 | 7.2 | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds(GO:0004553) |
1.6 | 6.5 | GO:0015232 | heme transporter activity(GO:0015232) |
0.2 | 6.3 | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709) |
0.4 | 5.6 | GO:0019841 | retinol binding(GO:0019841) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.4 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 0.8 | PID IL5 PATHWAY | IL5-mediated signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 11.8 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
2.4 | 7.2 | REACTOME DIGESTION OF DIETARY CARBOHYDRATE | Genes involved in Digestion of dietary carbohydrate |
0.5 | 6.3 | REACTOME SYNTHESIS OF BILE ACIDS AND BILE SALTS VIA 24 HYDROXYCHOLESTEROL | Genes involved in Synthesis of bile acids and bile salts via 24-hydroxycholesterol |
0.2 | 5.6 | REACTOME COMPLEMENT CASCADE | Genes involved in Complement cascade |
0.2 | 4.9 | REACTOME TETRAHYDROBIOPTERIN BH4 SYNTHESIS RECYCLING SALVAGE AND REGULATION | Genes involved in Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation |
0.1 | 3.2 | REACTOME AMINO ACID TRANSPORT ACROSS THE PLASMA MEMBRANE | Genes involved in Amino acid transport across the plasma membrane |
0.0 | 2.0 | REACTOME TRANSPORT OF VITAMINS NUCLEOSIDES AND RELATED MOLECULES | Genes involved in Transport of vitamins, nucleosides, and related molecules |
0.1 | 1.7 | REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS | Genes involved in Purine ribonucleoside monophosphate biosynthesis |
0.1 | 1.2 | REACTOME THE ACTIVATION OF ARYLSULFATASES | Genes involved in The activation of arylsulfatases |
0.0 | 0.8 | REACTOME IL 7 SIGNALING | Genes involved in Interleukin-7 signaling |