avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Trp53 | mm10_v2_chr11_+_69580359_69580382 | 0.82 | 9.3e-10 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_-_24760311 Show fit | 14.42 |
ENSMUST00000063956.5
|
CD177 antigen |
|
chr3_+_90669063 Show fit | 11.44 |
ENSMUST00000069927.8
|
S100 calcium binding protein A8 (calgranulin A) |
|
chr16_+_36253046 Show fit | 9.17 |
ENSMUST00000063539.6
|
RIKEN cDNA 2010005H15 gene |
|
chr17_-_33890539 Show fit | 9.02 |
ENSMUST00000173386.1
|
kinesin family member C1 |
|
chr17_-_33890584 Show fit | 8.88 |
ENSMUST00000114361.2
ENSMUST00000173492.1 |
kinesin family member C1 |
|
chr17_-_35066170 Show fit | 7.76 |
ENSMUST00000174190.1
ENSMUST00000097337.1 |
expressed sequence AU023871 |
|
chr10_+_75564086 Show fit | 6.65 |
ENSMUST00000141062.1
ENSMUST00000152657.1 |
gamma-glutamyltransferase 1 |
|
chr4_+_115057683 Show fit | 6.46 |
ENSMUST00000161601.1
|
T cell acute lymphocytic leukemia 1 |
|
chr4_+_115057410 Show fit | 6.23 |
ENSMUST00000136946.1
|
T cell acute lymphocytic leukemia 1 |
|
chr17_+_28207778 Show fit | 6.12 |
ENSMUST00000002327.5
|
differentially expressed in FDCP 6 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
6.0 | 17.9 | GO:0072382 | minus-end-directed vesicle transport along microtubule(GO:0072382) |
4.2 | 12.7 | GO:0060217 | hemangioblast cell differentiation(GO:0060217) |
3.8 | 11.4 | GO:0070488 | neutrophil aggregation(GO:0070488) |
2.6 | 10.6 | GO:0002540 | leukotriene production involved in inflammatory response(GO:0002540) |
0.1 | 9.6 | GO:0007019 | microtubule depolymerization(GO:0007019) |
1.0 | 8.3 | GO:1901164 | negative regulation of trophoblast cell migration(GO:1901164) |
0.4 | 7.8 | GO:0070986 | left/right axis specification(GO:0070986) |
1.4 | 7.0 | GO:0038032 | termination of G-protein coupled receptor signaling pathway(GO:0038032) |
0.8 | 6.6 | GO:1901748 | leukotriene D4 metabolic process(GO:1901748) leukotriene D4 biosynthetic process(GO:1901750) |
0.1 | 6.1 | GO:0007052 | mitotic spindle organization(GO:0007052) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.9 | 18.3 | GO:0031616 | spindle pole centrosome(GO:0031616) |
0.1 | 17.9 | GO:0045111 | intermediate filament cytoskeleton(GO:0045111) |
4.2 | 12.7 | GO:0033193 | Lsd1/2 complex(GO:0033193) |
0.1 | 11.7 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.7 | 10.6 | GO:0005641 | nuclear envelope lumen(GO:0005641) |
0.3 | 9.6 | GO:0001533 | cornified envelope(GO:0001533) |
0.1 | 8.9 | GO:0005881 | cytoplasmic microtubule(GO:0005881) |
0.1 | 7.6 | GO:0000786 | nucleosome(GO:0000786) |
0.2 | 7.0 | GO:0097440 | apical dendrite(GO:0097440) |
1.0 | 6.1 | GO:0031262 | Ndc80 complex(GO:0031262) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 17.0 | GO:0008569 | ATP-dependent microtubule motor activity, minus-end-directed(GO:0008569) |
0.2 | 12.7 | GO:0070888 | E-box binding(GO:0070888) |
1.4 | 11.4 | GO:0050786 | Toll-like receptor 4 binding(GO:0035662) RAGE receptor binding(GO:0050786) |
3.5 | 10.6 | GO:0004051 | arachidonate 5-lipoxygenase activity(GO:0004051) |
1.0 | 8.3 | GO:0005094 | Rho GDP-dissociation inhibitor activity(GO:0005094) |
0.1 | 8.1 | GO:0004869 | cysteine-type endopeptidase inhibitor activity(GO:0004869) |
0.1 | 8.0 | GO:0003777 | microtubule motor activity(GO:0003777) |
0.0 | 7.7 | GO:0017137 | Rab GTPase binding(GO:0017137) |
0.2 | 7.5 | GO:0043325 | phosphatidylinositol-3,4-bisphosphate binding(GO:0043325) |
0.6 | 6.6 | GO:0036374 | glutathione hydrolase activity(GO:0036374) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 15.2 | PID RHOA REG PATHWAY | Regulation of RhoA activity |
0.3 | 10.5 | PID TOLL ENDOGENOUS PATHWAY | Endogenous TLR signaling |
0.1 | 4.3 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.0 | 3.6 | PID PI3KCI PATHWAY | Class I PI3K signaling events |
0.1 | 3.0 | PID PLK1 PATHWAY | PLK1 signaling events |
0.1 | 2.9 | PID EPO PATHWAY | EPO signaling pathway |
0.1 | 2.8 | PID INTEGRIN CS PATHWAY | Integrin family cell surface interactions |
0.0 | 2.6 | PID E2F PATHWAY | E2F transcription factor network |
0.2 | 2.1 | SA G2 AND M PHASES | Cdc25 activates the cdc2/cyclin B complex to induce the G2/M transition. |
0.0 | 2.0 | PID IL12 STAT4 PATHWAY | IL12 signaling mediated by STAT4 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.7 | 17.9 | REACTOME KINESINS | Genes involved in Kinesins |
0.0 | 9.0 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.1 | 8.5 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |
0.2 | 6.6 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.0 | 6.2 | REACTOME G ALPHA I SIGNALLING EVENTS | Genes involved in G alpha (i) signalling events |
0.2 | 5.6 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.1 | 3.3 | REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX | Genes involved in Formation of the ternary complex, and subsequently, the 43S complex |
0.2 | 2.8 | REACTOME P130CAS LINKAGE TO MAPK SIGNALING FOR INTEGRINS | Genes involved in p130Cas linkage to MAPK signaling for integrins |
0.1 | 2.2 | REACTOME EFFECTS OF PIP2 HYDROLYSIS | Genes involved in Effects of PIP2 hydrolysis |
0.1 | 2.1 | REACTOME AKT PHOSPHORYLATES TARGETS IN THE CYTOSOL | Genes involved in AKT phosphorylates targets in the cytosol |