avrg: GSE58827: Dynamics of the Mouse Liver
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_102658640 Show fit | 4.54 |
ENSMUST00000080210.3
|
solute carrier family 1 (glial high affinity glutamate transporter), member 2 |
|
chr2_-_5714490 Show fit | 2.28 |
ENSMUST00000044009.7
|
calcium/calmodulin-dependent protein kinase ID |
|
chr15_-_60921270 Show fit | 2.27 |
ENSMUST00000096418.3
|
alpha-1-B glycoprotein |
|
chr12_+_78226627 Show fit | 2.06 |
ENSMUST00000110388.2
ENSMUST00000052472.4 |
gephyrin |
|
chr10_+_19934472 Show fit | 2.05 |
ENSMUST00000095806.3
ENSMUST00000120259.1 |
mitogen-activated protein kinase kinase kinase 5 |
|
chr18_-_46728342 Show fit | 2.05 |
ENSMUST00000035804.7
|
cysteine dioxygenase 1, cytosolic |
|
chr4_+_137862237 Show fit | 2.01 |
ENSMUST00000102518.3
|
endothelin converting enzyme 1 |
|
chr9_+_74953053 Show fit | 1.81 |
ENSMUST00000170846.1
|
family with sequence similarity 214, member A |
|
chr9_-_97018823 Show fit | 1.78 |
ENSMUST00000055433.4
|
splA/ryanodine receptor domain and SOCS box containing 4 |
|
chr19_-_44069736 Show fit | 1.74 |
ENSMUST00000172041.1
ENSMUST00000071698.6 ENSMUST00000112028.3 |
ER lipid raft associated 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 4.5 | GO:0070777 | D-aspartate transport(GO:0070777) D-aspartate import(GO:0070779) |
0.1 | 2.4 | GO:1902170 | cellular response to reactive nitrogen species(GO:1902170) |
0.3 | 2.3 | GO:0060267 | positive regulation of respiratory burst(GO:0060267) |
0.7 | 2.1 | GO:0007529 | establishment of synaptic specificity at neuromuscular junction(GO:0007529) |
0.7 | 2.0 | GO:0009093 | cysteine catabolic process(GO:0009093) L-cysteine catabolic process(GO:0019448) L-cysteine metabolic process(GO:0046439) |
0.7 | 2.0 | GO:0010814 | substance P catabolic process(GO:0010814) calcitonin catabolic process(GO:0010816) endothelin maturation(GO:0034959) |
0.0 | 1.9 | GO:0006457 | protein folding(GO:0006457) |
0.3 | 1.7 | GO:1902897 | regulation of postsynaptic density protein 95 clustering(GO:1902897) |
0.2 | 1.7 | GO:0090206 | negative regulation of cholesterol biosynthetic process(GO:0045541) negative regulation of cholesterol metabolic process(GO:0090206) |
0.2 | 1.7 | GO:1904153 | negative regulation of protein exit from endoplasmic reticulum(GO:0070862) negative regulation of retrograde protein transport, ER to cytosol(GO:1904153) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.5 | GO:0030673 | axolemma(GO:0030673) |
0.0 | 2.9 | GO:0019897 | extrinsic component of plasma membrane(GO:0019897) |
0.0 | 2.8 | GO:0010494 | cytoplasmic stress granule(GO:0010494) |
0.3 | 2.4 | GO:1990604 | IRE1-TRAF2-ASK1 complex(GO:1990604) |
0.1 | 2.4 | GO:0032590 | dendrite membrane(GO:0032590) |
0.2 | 2.0 | GO:0033093 | Weibel-Palade body(GO:0033093) |
0.1 | 1.7 | GO:0072687 | meiotic spindle(GO:0072687) |
0.1 | 1.7 | GO:0016342 | catenin complex(GO:0016342) |
0.1 | 1.7 | GO:0044292 | dendrite terminus(GO:0044292) |
0.1 | 1.4 | GO:0033017 | sarcoplasmic reticulum membrane(GO:0033017) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 4.5 | GO:0015501 | glutamate:sodium symporter activity(GO:0015501) |
0.0 | 4.0 | GO:0030165 | PDZ domain binding(GO:0030165) |
0.1 | 2.5 | GO:0004683 | calmodulin-dependent protein kinase activity(GO:0004683) |
0.7 | 2.1 | GO:0008940 | nitrate reductase activity(GO:0008940) |
0.0 | 2.1 | GO:0017022 | myosin binding(GO:0017022) |
0.1 | 2.0 | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen(GO:0016702) |
0.1 | 1.7 | GO:0035925 | mRNA 3'-UTR AU-rich region binding(GO:0035925) |
0.1 | 1.7 | GO:0045294 | alpha-catenin binding(GO:0045294) |
0.1 | 1.7 | GO:0005545 | 1-phosphatidylinositol binding(GO:0005545) |
0.1 | 1.7 | GO:0031681 | G-protein beta-subunit binding(GO:0031681) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 2.8 | ST PHOSPHOINOSITIDE 3 KINASE PATHWAY | PI3K Pathway |
0.1 | 2.2 | ST WNT CA2 CYCLIC GMP PATHWAY | Wnt/Ca2+/cyclic GMP signaling. |
0.1 | 2.2 | PID AURORA A PATHWAY | Aurora A signaling |
0.1 | 1.8 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 1.5 | PID NECTIN PATHWAY | Nectin adhesion pathway |
0.0 | 1.4 | PID P38 MKK3 6PATHWAY | p38 MAPK signaling pathway |
0.0 | 1.3 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.0 | 1.2 | PID EPHA FWDPATHWAY | EPHA forward signaling |
0.0 | 1.1 | PID MET PATHWAY | Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met) |
0.0 | 1.0 | PID HIF1A PATHWAY | Hypoxic and oxygen homeostasis regulation of HIF-1-alpha |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.1 | REACTOME ADHERENS JUNCTIONS INTERACTIONS | Genes involved in Adherens junctions interactions |
0.0 | 2.7 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
0.0 | 2.4 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.0 | 2.1 | REACTOME METABOLISM OF VITAMINS AND COFACTORS | Genes involved in Metabolism of vitamins and cofactors |
0.1 | 2.0 | REACTOME SULFUR AMINO ACID METABOLISM | Genes involved in Sulfur amino acid metabolism |
0.0 | 2.0 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.2 | 1.4 | REACTOME ELEVATION OF CYTOSOLIC CA2 LEVELS | Genes involved in Elevation of cytosolic Ca2+ levels |
0.0 | 1.2 | REACTOME ANTIVIRAL MECHANISM BY IFN STIMULATED GENES | Genes involved in Antiviral mechanism by IFN-stimulated genes |
0.0 | 1.1 | REACTOME SYNTHESIS OF VERY LONG CHAIN FATTY ACYL COAS | Genes involved in Synthesis of very long-chain fatty acyl-CoAs |
0.0 | 1.1 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |