avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Dlx3 | mm10_v2_chr11_+_95120089_95120125 | 0.55 | 5.1e-04 | Click! |
Vsx2 | mm10_v2_chr12_+_84569762_84569840 | 0.22 | 1.9e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_-_168767136 Show fit | 12.44 |
ENSMUST00000029061.5
ENSMUST00000103074.1 |
sal-like 4 (Drosophila) |
|
chr2_-_168767029 Show fit | 9.87 |
ENSMUST00000075044.3
|
sal-like 4 (Drosophila) |
|
chr4_+_34893772 Show fit | 9.18 |
ENSMUST00000029975.3
ENSMUST00000135871.1 ENSMUST00000108130.1 |
glycoprotein hormones, alpha subunit |
|
chr12_+_109545390 Show fit | 7.71 |
ENSMUST00000146701.1
|
maternally expressed 3 |
|
chr14_+_27000362 Show fit | 7.08 |
ENSMUST00000035433.8
|
homeobox gene expressed in ES cells |
|
chr2_+_84734050 Show fit | 6.39 |
ENSMUST00000090729.2
|
yippee-like 4 (Drosophila) |
|
chr16_-_42340595 Show fit | 5.94 |
ENSMUST00000102817.4
|
growth associated protein 43 |
|
chr3_-_116253467 Show fit | 5.53 |
ENSMUST00000090473.5
|
G-protein coupled receptor 88 |
|
chr3_+_51661167 Show fit | 5.41 |
ENSMUST00000099106.3
|
microsomal glutathione S-transferase 2 |
|
chr19_+_38132767 Show fit | 5.20 |
ENSMUST00000025956.5
ENSMUST00000112329.1 |
phosphodiesterase 6C, cGMP specific, cone, alpha prime |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 22.3 | GO:0001833 | inner cell mass cell proliferation(GO:0001833) |
0.7 | 9.2 | GO:0046884 | follicle-stimulating hormone secretion(GO:0046884) |
0.9 | 8.7 | GO:0030916 | otic vesicle formation(GO:0030916) |
0.3 | 7.7 | GO:0008340 | determination of adult lifespan(GO:0008340) |
0.7 | 5.9 | GO:0016198 | axon choice point recognition(GO:0016198) |
1.4 | 5.5 | GO:0061743 | motor learning(GO:0061743) |
0.1 | 5.5 | GO:0032094 | response to food(GO:0032094) |
0.4 | 5.4 | GO:0019370 | leukotriene biosynthetic process(GO:0019370) |
0.4 | 5.2 | GO:0046549 | retinal cone cell development(GO:0046549) |
0.3 | 4.7 | GO:0048934 | peripheral nervous system neuron differentiation(GO:0048934) peripheral nervous system neuron development(GO:0048935) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 22.3 | GO:0000792 | heterochromatin(GO:0000792) |
0.3 | 5.9 | GO:0031527 | filopodium membrane(GO:0031527) |
0.0 | 5.3 | GO:0005635 | nuclear envelope(GO:0005635) |
0.0 | 3.5 | GO:0022625 | cytosolic large ribosomal subunit(GO:0022625) |
0.0 | 2.9 | GO:0005814 | centriole(GO:0005814) |
0.2 | 2.8 | GO:0071439 | clathrin complex(GO:0071439) |
0.1 | 2.6 | GO:0031045 | dense core granule(GO:0031045) |
0.0 | 2.4 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.6 | 2.2 | GO:0060187 | cell pole(GO:0060187) |
0.2 | 2.1 | GO:0045252 | oxoglutarate dehydrogenase complex(GO:0045252) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 33.7 | GO:0008134 | transcription factor binding(GO:0008134) |
0.1 | 8.1 | GO:0005179 | hormone activity(GO:0005179) |
0.0 | 6.2 | GO:0003774 | motor activity(GO:0003774) |
0.7 | 5.9 | GO:0035727 | lysophosphatidic acid binding(GO:0035727) |
0.2 | 5.9 | GO:0004181 | metallocarboxypeptidase activity(GO:0004181) |
1.4 | 5.4 | GO:0004464 | leukotriene-C4 synthase activity(GO:0004464) |
0.2 | 5.2 | GO:0047555 | 3',5'-cyclic-GMP phosphodiesterase activity(GO:0047555) |
0.4 | 4.2 | GO:0036374 | glutathione hydrolase activity(GO:0036374) |
0.1 | 3.5 | GO:0005035 | tumor necrosis factor-activated receptor activity(GO:0005031) death receptor activity(GO:0005035) |
0.0 | 3.5 | GO:0003735 | structural constituent of ribosome(GO:0003735) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 19.9 | PID BETA CATENIN NUC PATHWAY | Regulation of nuclear beta catenin signaling and target gene transcription |
0.1 | 9.2 | PID REG GR PATHWAY | Glucocorticoid receptor regulatory network |
0.1 | 5.9 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.2 | 5.2 | PID CONE PATHWAY | Visual signal transduction: Cones |
0.1 | 3.8 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.1 | 2.2 | SA PTEN PATHWAY | PTEN is a tumor suppressor that dephosphorylates the lipid messenger phosphatidylinositol triphosphate. |
0.1 | 1.3 | PID EPHA2 FWD PATHWAY | EPHA2 forward signaling |
0.0 | 1.2 | PID A6B1 A6B4 INTEGRIN PATHWAY | a6b1 and a6b4 Integrin signaling |
0.0 | 0.5 | PID WNT NONCANONICAL PATHWAY | Noncanonical Wnt signaling pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 9.6 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
1.1 | 9.2 | REACTOME HORMONE LIGAND BINDING RECEPTORS | Genes involved in Hormone ligand-binding receptors |
0.1 | 4.5 | REACTOME METABOLISM OF STEROID HORMONES AND VITAMINS A AND D | Genes involved in Metabolism of steroid hormones and vitamins A and D |
0.0 | 3.5 | REACTOME PEPTIDE CHAIN ELONGATION | Genes involved in Peptide chain elongation |
0.0 | 3.2 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.1 | 1.8 | REACTOME GENERATION OF SECOND MESSENGER MOLECULES | Genes involved in Generation of second messenger molecules |
0.1 | 1.6 | REACTOME FGFR1 LIGAND BINDING AND ACTIVATION | Genes involved in FGFR1 ligand binding and activation |
0.0 | 1.3 | REACTOME GLUCOSE TRANSPORT | Genes involved in Glucose transport |
0.0 | 1.2 | REACTOME COLLAGEN FORMATION | Genes involved in Collagen formation |
0.0 | 1.1 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |