avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Creb3l1 | mm10_v2_chr2_-_92024502_92024529 | 0.53 | 9.3e-04 | Click! |
Xbp1 | mm10_v2_chr11_+_5520652_5520659 | 0.09 | 6.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_-_128400448 Show fit | 1.87 |
ENSMUST00000167859.1
|
solute carrier family 39 (metal ion transporter), member 5 |
|
chr7_-_142578093 Show fit | 1.80 |
ENSMUST00000149974.1
ENSMUST00000152754.1 |
H19 fetal liver mRNA |
|
chr14_-_60086832 Show fit | 1.80 |
ENSMUST00000080368.5
|
ATPase, aminophospholipid transporter-like, class I, type 8A, member 2 |
|
chr7_-_142578139 Show fit | 1.74 |
ENSMUST00000136359.1
|
H19 fetal liver mRNA |
|
chr15_+_79516396 Show fit | 1.61 |
ENSMUST00000010974.7
|
KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3 |
|
chr7_-_45092130 Show fit | 1.45 |
ENSMUST00000148175.1
|
reticulocalbin 3, EF-hand calcium binding domain |
|
chr7_-_45092198 Show fit | 1.34 |
ENSMUST00000140449.1
ENSMUST00000117546.1 ENSMUST00000019683.3 |
reticulocalbin 3, EF-hand calcium binding domain |
|
chr17_-_26199008 Show fit | 1.15 |
ENSMUST00000142410.1
ENSMUST00000120333.1 ENSMUST00000039113.7 |
protein disulfide isomerase associated 2 |
|
chr10_-_84533884 Show fit | 1.00 |
ENSMUST00000053871.3
|
cytoskeleton-associated protein 4 |
|
chr7_-_45211877 Show fit | 1.00 |
ENSMUST00000033057.7
|
dickkopf-like 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 3.5 | GO:2000653 | regulation of genetic imprinting(GO:2000653) |
0.6 | 1.9 | GO:0034224 | cellular response to zinc ion starvation(GO:0034224) |
0.2 | 1.8 | GO:0061092 | regulation of phospholipid translocation(GO:0061091) positive regulation of phospholipid translocation(GO:0061092) |
0.2 | 1.7 | GO:0006621 | protein retention in ER lumen(GO:0006621) |
0.1 | 1.1 | GO:0048251 | elastic fiber assembly(GO:0048251) |
0.0 | 1.1 | GO:1902175 | regulation of oxidative stress-induced intrinsic apoptotic signaling pathway(GO:1902175) |
0.2 | 1.0 | GO:2000680 | regulation of rubidium ion transport(GO:2000680) |
0.0 | 1.0 | GO:0045600 | positive regulation of fat cell differentiation(GO:0045600) |
0.0 | 0.7 | GO:0060510 | Type II pneumocyte differentiation(GO:0060510) |
0.0 | 0.7 | GO:0007289 | spermatid nucleus differentiation(GO:0007289) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.4 | GO:0005844 | polysome(GO:0005844) |
0.0 | 1.8 | GO:0005811 | lipid particle(GO:0005811) |
0.0 | 1.1 | GO:0005581 | collagen trimer(GO:0005581) |
0.2 | 1.0 | GO:0097487 | multivesicular body, internal vesicle(GO:0097487) |
0.2 | 0.6 | GO:0043293 | apoptosome(GO:0043293) |
0.1 | 0.4 | GO:0000172 | ribonuclease MRP complex(GO:0000172) |
0.0 | 0.3 | GO:0030126 | COPI vesicle coat(GO:0030126) |
0.0 | 0.3 | GO:0043083 | synaptic cleft(GO:0043083) |
0.0 | 0.3 | GO:0032593 | insulin-responsive compartment(GO:0032593) |
0.0 | 0.3 | GO:0031527 | filopodium membrane(GO:0031527) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.1 | GO:0005385 | zinc ion transmembrane transporter activity(GO:0005385) |
0.1 | 1.8 | GO:0004012 | phospholipid-translocating ATPase activity(GO:0004012) |
0.4 | 1.7 | GO:0046923 | ER retention sequence binding(GO:0046923) |
0.1 | 1.2 | GO:0015037 | peptide disulfide oxidoreductase activity(GO:0015037) |
0.0 | 1.2 | GO:0005246 | calcium channel regulator activity(GO:0005246) |
0.2 | 1.1 | GO:0004720 | protein-lysine 6-oxidase activity(GO:0004720) |
0.0 | 0.7 | GO:0003785 | actin monomer binding(GO:0003785) |
0.0 | 0.6 | GO:0008656 | cysteine-type endopeptidase activator activity involved in apoptotic process(GO:0008656) |
0.0 | 0.6 | GO:0070412 | R-SMAD binding(GO:0070412) |
0.1 | 0.5 | GO:0008184 | glycogen phosphorylase activity(GO:0008184) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 1.3 | PID ERA GENOMIC PATHWAY | Validated nuclear estrogen receptor alpha network |
0.0 | 0.6 | SA PROGRAMMED CELL DEATH | Programmed cell death, or apoptosis, eliminates damaged or unneeded cells. |
0.0 | 0.5 | PID CIRCADIAN PATHWAY | Circadian rhythm pathway |
0.0 | 0.4 | ST JAK STAT PATHWAY | Jak-STAT Pathway |
0.0 | 0.2 | PID TCR RAS PATHWAY | Ras signaling in the CD4+ TCR pathway |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 2.1 | REACTOME ZINC TRANSPORTERS | Genes involved in Zinc transporters |
0.0 | 1.8 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.0 | 1.3 | REACTOME ACTIVATION OF CHAPERONE GENES BY XBP1S | Genes involved in Activation of Chaperone Genes by XBP1(S) |
0.1 | 0.6 | REACTOME COPI MEDIATED TRANSPORT | Genes involved in COPI Mediated Transport |
0.0 | 0.6 | REACTOME INTRINSIC PATHWAY FOR APOPTOSIS | Genes involved in Intrinsic Pathway for Apoptosis |
0.0 | 0.5 | REACTOME GLYCOGEN BREAKDOWN GLYCOGENOLYSIS | Genes involved in Glycogen breakdown (glycogenolysis) |
0.0 | 0.5 | REACTOME BMAL1 CLOCK NPAS2 ACTIVATES CIRCADIAN EXPRESSION | Genes involved in BMAL1:CLOCK/NPAS2 Activates Circadian Expression |
0.0 | 0.4 | REACTOME TANDEM PORE DOMAIN POTASSIUM CHANNELS | Genes involved in Tandem pore domain potassium channels |
0.0 | 0.4 | REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS | Genes involved in Purine ribonucleoside monophosphate biosynthesis |
0.0 | 0.4 | REACTOME BASIGIN INTERACTIONS | Genes involved in Basigin interactions |