avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Zbtb14 | mm10_v2_chr17_+_69383024_69383065 | -0.75 | 1.5e-07 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr2_+_27677201 Show fit | 7.41 |
ENSMUST00000077257.5
|
retinoid X receptor alpha |
|
chr2_+_27677234 Show fit | 7.02 |
ENSMUST00000166775.1
|
retinoid X receptor alpha |
|
chr19_+_37697792 Show fit | 6.70 |
ENSMUST00000025946.5
|
cytochrome P450, family 26, subfamily a, polypeptide 1 |
|
chr3_-_89322883 Show fit | 5.21 |
ENSMUST00000029673.5
|
ephrin A3 |
|
chr1_+_182763961 Show fit | 5.15 |
ENSMUST00000153348.1
|
sushi domain containing 4 |
|
chr11_-_120660565 Show fit | 5.10 |
ENSMUST00000106177.1
|
notum pectinacetylesterase homolog (Drosophila) |
|
chr8_+_36457548 Show fit | 4.76 |
ENSMUST00000135373.1
ENSMUST00000147525.1 |
RIKEN cDNA 6430573F11 gene |
|
chr7_-_16614937 Show fit | 4.60 |
ENSMUST00000171937.1
ENSMUST00000075845.4 |
glucocorticoid receptor DNA binding factor 1 |
|
chr18_+_45268876 Show fit | 4.59 |
ENSMUST00000183850.1
ENSMUST00000066890.7 |
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2 |
|
chr11_+_104231390 Show fit | 4.44 |
ENSMUST00000106992.3
|
microtubule-associated protein tau |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 15.9 | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER(GO:0006890) |
2.9 | 14.4 | GO:0045994 | regulation of translational initiation by iron(GO:0006447) positive regulation of translational initiation by iron(GO:0045994) |
1.5 | 13.3 | GO:1900034 | regulation of cellular response to heat(GO:1900034) |
1.2 | 9.8 | GO:0018401 | peptidyl-proline hydroxylation to 4-hydroxy-L-proline(GO:0018401) |
3.1 | 9.3 | GO:0006507 | GPI anchor release(GO:0006507) |
1.3 | 9.2 | GO:2000124 | regulation of endocannabinoid signaling pathway(GO:2000124) |
1.7 | 6.7 | GO:0016103 | diterpenoid catabolic process(GO:0016103) retinoic acid catabolic process(GO:0034653) |
1.1 | 6.7 | GO:0090005 | negative regulation of Golgi to plasma membrane protein transport(GO:0042997) negative regulation of establishment of protein localization to plasma membrane(GO:0090005) |
0.8 | 6.7 | GO:0032020 | ISG15-protein conjugation(GO:0032020) |
0.8 | 6.2 | GO:0045162 | clustering of voltage-gated sodium channels(GO:0045162) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 20.7 | GO:0005783 | endoplasmic reticulum(GO:0005783) |
0.1 | 16.1 | GO:0055037 | recycling endosome(GO:0055037) |
1.3 | 13.2 | GO:0045298 | tubulin complex(GO:0045298) |
0.0 | 11.8 | GO:0005789 | endoplasmic reticulum membrane(GO:0005789) |
0.4 | 9.3 | GO:0043196 | varicosity(GO:0043196) |
0.1 | 7.0 | GO:0005902 | microvillus(GO:0005902) |
0.0 | 6.7 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
0.4 | 5.8 | GO:0043203 | axon hillock(GO:0043203) |
0.2 | 5.5 | GO:0031588 | nucleotide-activated protein kinase complex(GO:0031588) |
0.2 | 5.5 | GO:0032588 | trans-Golgi network membrane(GO:0032588) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.9 | 13.2 | GO:0099609 | microtubule lateral binding(GO:0099609) |
1.6 | 12.5 | GO:0070644 | vitamin D response element binding(GO:0070644) |
0.1 | 11.9 | GO:0017137 | Rab GTPase binding(GO:0017137) |
0.4 | 11.8 | GO:0004012 | phospholipid-translocating ATPase activity(GO:0004012) |
0.2 | 9.8 | GO:0070412 | R-SMAD binding(GO:0070412) |
0.6 | 9.2 | GO:0047372 | acylglycerol lipase activity(GO:0047372) |
0.2 | 9.0 | GO:0003785 | actin monomer binding(GO:0003785) |
0.1 | 8.6 | GO:0019905 | syntaxin binding(GO:0019905) |
0.1 | 8.4 | GO:0015485 | cholesterol binding(GO:0015485) |
0.2 | 7.7 | GO:0005520 | insulin-like growth factor binding(GO:0005520) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 16.0 | PID RETINOIC ACID PATHWAY | Retinoic acid receptors-mediated signaling |
0.7 | 13.2 | PID P38 GAMMA DELTA PATHWAY | Signaling mediated by p38-gamma and p38-delta |
0.2 | 12.6 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.2 | 9.1 | PID BMP PATHWAY | BMP receptor signaling |
0.2 | 7.2 | PID IL1 PATHWAY | IL1-mediated signaling events |
0.0 | 6.3 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.2 | 6.1 | PID HIF1A PATHWAY | Hypoxic and oxygen homeostasis regulation of HIF-1-alpha |
0.1 | 6.1 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.0 | 4.9 | WNT SIGNALING | Genes related to Wnt-mediated signal transduction |
0.1 | 4.2 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 16.7 | REACTOME CIRCADIAN REPRESSION OF EXPRESSION BY REV ERBA | Genes involved in Circadian Repression of Expression by REV-ERBA |
0.3 | 13.6 | REACTOME ION TRANSPORT BY P TYPE ATPASES | Genes involved in Ion transport by P-type ATPases |
0.5 | 13.3 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |
0.4 | 10.5 | REACTOME CYTOCHROME P450 ARRANGED BY SUBSTRATE TYPE | Genes involved in Cytochrome P450 - arranged by substrate type |
0.0 | 9.5 | REACTOME CLASS I MHC MEDIATED ANTIGEN PROCESSING PRESENTATION | Genes involved in Class I MHC mediated antigen processing & presentation |
0.4 | 8.7 | REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS | Genes involved in Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis |
0.3 | 6.9 | REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA | Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha |
0.0 | 6.5 | REACTOME POTASSIUM CHANNELS | Genes involved in Potassium Channels |
0.3 | 6.4 | REACTOME ALPHA LINOLENIC ACID ALA METABOLISM | Genes involved in alpha-linolenic acid (ALA) metabolism |
0.2 | 6.1 | REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT | Genes involved in Chylomicron-mediated lipid transport |