avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Zbtb7b | mm10_v2_chr3_-_89387132_89387189 | 0.42 | 1.1e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_+_84756055 Show fit | 5.52 |
ENSMUST00000060397.6
|
regulatory factor X, 4 (influences HLA class II expression) |
|
chr6_-_141946960 Show fit | 5.25 |
ENSMUST00000042119.5
|
solute carrier organic anion transporter family, member 1a1 |
|
chr2_+_102658640 Show fit | 4.96 |
ENSMUST00000080210.3
|
solute carrier family 1 (glial high affinity glutamate transporter), member 2 |
|
chr6_-_141946791 Show fit | 4.83 |
ENSMUST00000168119.1
|
solute carrier organic anion transporter family, member 1a1 |
|
chr7_+_51878967 Show fit | 4.52 |
ENSMUST00000051912.6
|
growth arrest specific 2 |
|
chr7_+_51879041 Show fit | 4.18 |
ENSMUST00000107591.2
|
growth arrest specific 2 |
|
chr1_+_167598450 Show fit | 3.23 |
ENSMUST00000111386.1
ENSMUST00000111384.1 |
retinoid X receptor gamma |
|
chr12_-_83597140 Show fit | 3.23 |
ENSMUST00000048319.4
|
zinc finger, FYVE domain containing 1 |
|
chr11_-_113709520 Show fit | 3.20 |
ENSMUST00000173655.1
ENSMUST00000100248.4 |
cleavage and polyadenylation specific factor 4-like |
|
chrX_+_36598199 Show fit | 3.12 |
ENSMUST00000073339.6
|
progesterone receptor membrane component 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 10.1 | GO:0035634 | response to stilbenoid(GO:0035634) |
0.0 | 7.8 | GO:0007050 | cell cycle arrest(GO:0007050) |
0.1 | 5.9 | GO:1901522 | positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus(GO:1901522) |
1.1 | 5.5 | GO:0021914 | negative regulation of smoothened signaling pathway involved in ventral spinal cord patterning(GO:0021914) |
0.7 | 5.0 | GO:0070779 | D-aspartate transport(GO:0070777) D-aspartate import(GO:0070779) |
0.5 | 4.7 | GO:0051596 | methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione(GO:0019243) methylglyoxal catabolic process(GO:0051596) methylglyoxal catabolic process to lactate(GO:0061727) |
0.6 | 4.6 | GO:0098967 | exocytic insertion of neurotransmitter receptor to plasma membrane(GO:0098881) exocytic insertion of neurotransmitter receptor to postsynaptic membrane(GO:0098967) |
1.4 | 4.3 | GO:0061181 | regulation of chondrocyte development(GO:0061181) |
0.1 | 3.6 | GO:1901998 | toxin transport(GO:1901998) |
0.3 | 3.2 | GO:0098789 | pre-mRNA cleavage required for polyadenylation(GO:0098789) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 6.3 | GO:0005759 | mitochondrial matrix(GO:0005759) |
0.1 | 5.0 | GO:0030673 | axolemma(GO:0030673) |
0.3 | 4.6 | GO:0031083 | BLOC-1 complex(GO:0031083) |
0.0 | 4.1 | GO:0016323 | basolateral plasma membrane(GO:0016323) |
1.1 | 3.2 | GO:0097629 | extrinsic component of omegasome membrane(GO:0097629) |
0.1 | 3.2 | GO:0005847 | mRNA cleavage and polyadenylation specificity factor complex(GO:0005847) |
0.2 | 3.1 | GO:0043203 | axon hillock(GO:0043203) |
0.1 | 2.4 | GO:0016581 | NuRD complex(GO:0016581) CHD-type complex(GO:0090545) |
0.2 | 2.2 | GO:0005832 | chaperonin-containing T-complex(GO:0005832) |
0.1 | 1.9 | GO:0097386 | glial cell projection(GO:0097386) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 10.1 | GO:0015347 | sodium-independent organic anion transmembrane transporter activity(GO:0015347) |
0.6 | 6.0 | GO:0004886 | 9-cis retinoic acid receptor activity(GO:0004886) |
0.8 | 5.0 | GO:0015501 | glutamate:sodium symporter activity(GO:0015501) |
0.5 | 4.7 | GO:0004416 | hydroxyacylglutathione hydrolase activity(GO:0004416) |
0.1 | 4.6 | GO:0005484 | SNAP receptor activity(GO:0005484) |
0.2 | 4.3 | GO:0070411 | I-SMAD binding(GO:0070411) |
0.0 | 4.3 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.0 | 4.2 | GO:0008017 | microtubule binding(GO:0008017) |
0.1 | 3.4 | GO:0004521 | endoribonuclease activity(GO:0004521) |
0.1 | 3.3 | GO:0005385 | zinc ion transmembrane transporter activity(GO:0005385) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 8.0 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.1 | 7.2 | PID RETINOIC ACID PATHWAY | Retinoic acid receptors-mediated signaling |
0.0 | 4.8 | PID P73PATHWAY | p73 transcription factor network |
0.1 | 3.7 | PID BETA CATENIN DEG PATHWAY | Degradation of beta catenin |
0.0 | 3.5 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 2.2 | PID HDAC CLASSIII PATHWAY | Signaling events mediated by HDAC Class III |
0.0 | 1.5 | ST GAQ PATHWAY | G alpha q Pathway |
0.0 | 1.5 | PID HDAC CLASSI PATHWAY | Signaling events mediated by HDAC Class I |
0.0 | 1.3 | PID LYSOPHOSPHOLIPID PATHWAY | LPA receptor mediated events |
0.0 | 1.0 | PID ERBB1 INTERNALIZATION PATHWAY | Internalization of ErbB1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 10.3 | REACTOME NUCLEAR RECEPTOR TRANSCRIPTION PATHWAY | Genes involved in Nuclear Receptor transcription pathway |
0.3 | 9.6 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |
0.1 | 5.0 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
0.1 | 3.3 | REACTOME ZINC TRANSPORTERS | Genes involved in Zinc transporters |
0.1 | 3.0 | REACTOME INTERFERON ALPHA BETA SIGNALING | Genes involved in Interferon alpha/beta signaling |
0.1 | 2.8 | REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM | Genes involved in Branched-chain amino acid catabolism |
0.1 | 2.8 | REACTOME INTRINSIC PATHWAY | Genes involved in Intrinsic Pathway |
0.1 | 2.2 | REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS | Genes involved in Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis |
0.1 | 1.9 | REACTOME YAP1 AND WWTR1 TAZ STIMULATED GENE EXPRESSION | Genes involved in YAP1- and WWTR1 (TAZ)-stimulated gene expression |
0.1 | 1.6 | REACTOME SYNTHESIS OF PE | Genes involved in Synthesis of PE |