avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Zbtb7c | mm10_v2_chr18_+_76059458_76059501 | 0.55 | 4.7e-04 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_-_100135928 Show fit | 4.73 |
ENSMUST00000107411.2
|
keratin 15 |
|
chr12_-_76709997 Show fit | 4.31 |
ENSMUST00000166101.1
|
spectrin beta, erythrocytic |
|
chr11_-_100207507 Show fit | 3.44 |
ENSMUST00000007272.7
|
keratin 14 |
|
chr2_+_157560078 Show fit | 3.22 |
ENSMUST00000153739.2
ENSMUST00000173595.1 ENSMUST00000109526.1 ENSMUST00000173839.1 ENSMUST00000173041.1 ENSMUST00000173793.1 ENSMUST00000172487.1 ENSMUST00000088484.5 |
neuronatin |
|
chr10_-_79874211 Show fit | 2.54 |
ENSMUST00000167897.1
|
cDNA sequence BC005764 |
|
chr14_-_54994541 Show fit | 2.54 |
ENSMUST00000153783.1
ENSMUST00000168485.1 ENSMUST00000102803.3 |
myosin, heavy polypeptide 7, cardiac muscle, beta |
|
chr14_+_118854695 Show fit | 2.49 |
ENSMUST00000100314.3
|
claudin 10 |
|
chr2_-_180642681 Show fit | 2.49 |
ENSMUST00000037877.10
|
transcription factor-like 5 (basic helix-loop-helix) |
|
chr11_+_53519871 Show fit | 2.41 |
ENSMUST00000120878.2
|
septin 8 |
|
chr11_+_53519920 Show fit | 2.32 |
ENSMUST00000147912.1
|
septin 8 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.3 | GO:0006779 | porphyrin-containing compound biosynthetic process(GO:0006779) |
0.5 | 3.4 | GO:0045110 | intermediate filament bundle assembly(GO:0045110) |
0.0 | 3.2 | GO:0032024 | positive regulation of insulin secretion(GO:0032024) |
0.5 | 2.5 | GO:0031444 | regulation of twitch skeletal muscle contraction(GO:0014724) slow-twitch skeletal muscle fiber contraction(GO:0031444) |
0.0 | 2.5 | GO:0030433 | ER-associated ubiquitin-dependent protein catabolic process(GO:0030433) |
0.0 | 2.4 | GO:0071805 | potassium ion transmembrane transport(GO:0071805) |
0.8 | 2.3 | GO:0098928 | presynaptic signal transduction(GO:0098928) presynapse to nucleus signaling pathway(GO:0099526) |
0.1 | 2.3 | GO:0048304 | positive regulation of isotype switching to IgG isotypes(GO:0048304) |
0.1 | 2.1 | GO:0045109 | intermediate filament organization(GO:0045109) |
0.1 | 2.0 | GO:0045830 | positive regulation of isotype switching(GO:0045830) negative regulation of double-strand break repair via homologous recombination(GO:2000042) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 7.1 | GO:0043209 | myelin sheath(GO:0043209) |
0.2 | 5.5 | GO:0045095 | keratin filament(GO:0045095) |
0.6 | 4.3 | GO:0008091 | spectrin(GO:0008091) |
0.0 | 3.8 | GO:0005882 | intermediate filament(GO:0005882) |
0.0 | 3.2 | GO:0008076 | voltage-gated potassium channel complex(GO:0008076) |
0.3 | 2.5 | GO:0000835 | ER ubiquitin ligase complex(GO:0000835) Hrd1p ubiquitin ligase complex(GO:0000836) |
0.1 | 2.5 | GO:0001673 | male germ cell nucleus(GO:0001673) |
0.1 | 2.5 | GO:0032982 | muscle myosin complex(GO:0005859) myosin filament(GO:0032982) |
0.8 | 2.3 | GO:1990257 | piccolo-bassoon transport vesicle(GO:1990257) |
0.5 | 2.1 | GO:0043259 | laminin-1 complex(GO:0005606) laminin-10 complex(GO:0043259) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.8 | GO:0005525 | GTP binding(GO:0005525) |
0.1 | 4.3 | GO:0030506 | ankyrin binding(GO:0030506) |
0.0 | 4.3 | GO:0097110 | scaffold protein binding(GO:0097110) |
0.7 | 3.4 | GO:1990254 | keratin filament binding(GO:1990254) |
0.1 | 2.5 | GO:1904264 | ubiquitin protein ligase activity involved in ERAD pathway(GO:1904264) |
0.1 | 2.5 | GO:0030898 | actin-dependent ATPase activity(GO:0030898) |
0.1 | 2.4 | GO:0001222 | transcription corepressor binding(GO:0001222) |
0.0 | 2.2 | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds(GO:0016810) |
0.2 | 2.1 | GO:0043208 | glycosphingolipid binding(GO:0043208) |
0.3 | 2.0 | GO:0061649 | ubiquitinated histone binding(GO:0061649) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.4 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
0.2 | 2.1 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.0 | 1.8 | PID ARF6 PATHWAY | Arf6 signaling events |
0.0 | 1.7 | PID ECADHERIN NASCENT AJ PATHWAY | E-cadherin signaling in the nascent adherens junction |
0.0 | 1.1 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.0 | 0.9 | PID WNT SIGNALING PATHWAY | Wnt signaling network |
0.0 | 0.9 | PID WNT NONCANONICAL PATHWAY | Noncanonical Wnt signaling pathway |
0.0 | 0.9 | PID RAC1 PATHWAY | RAC1 signaling pathway |
0.0 | 0.8 | PID EPHA FWDPATHWAY | EPHA forward signaling |
0.0 | 0.8 | NABA COLLAGENS | Genes encoding collagen proteins |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.3 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.3 | 3.6 | REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION | Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression |
0.0 | 3.0 | REACTOME L1CAM INTERACTIONS | Genes involved in L1CAM interactions |
0.1 | 2.2 | REACTOME CRMPS IN SEMA3A SIGNALING | Genes involved in CRMPs in Sema3A signaling |
0.0 | 1.8 | REACTOME AMINE LIGAND BINDING RECEPTORS | Genes involved in Amine ligand-binding receptors |
0.0 | 1.8 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
0.1 | 1.6 | REACTOME AMINE DERIVED HORMONES | Genes involved in Amine-derived hormones |
0.0 | 0.9 | REACTOME LATENT INFECTION OF HOMO SAPIENS WITH MYCOBACTERIUM TUBERCULOSIS | Genes involved in Latent infection of Homo sapiens with Mycobacterium tuberculosis |
0.1 | 0.8 | REACTOME SLBP DEPENDENT PROCESSING OF REPLICATION DEPENDENT HISTONE PRE MRNAS | Genes involved in SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs |
0.0 | 0.8 | REACTOME SYNTHESIS OF SUBSTRATES IN N GLYCAN BIOSYTHESIS | Genes involved in Synthesis of substrates in N-glycan biosythesis |