avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Zfp652 | mm10_v2_chr11_+_95749067_95749067 | 0.41 | 1.3e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr14_-_70627008 Show fit | 2.42 |
ENSMUST00000110984.2
|
dematin actin binding protein |
|
chr5_+_115908644 Show fit | 2.36 |
ENSMUST00000141101.1
|
citron |
|
chr4_-_134254076 Show fit | 2.34 |
ENSMUST00000060050.5
|
glycine/arginine rich protein 1 |
|
chr3_-_116129615 Show fit | 2.22 |
ENSMUST00000029574.8
|
vascular cell adhesion molecule 1 |
|
chr1_+_86303221 Show fit | 1.96 |
ENSMUST00000113306.2
|
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 |
|
chr3_+_68869563 Show fit | 1.88 |
ENSMUST00000054551.2
|
RIKEN cDNA 1110032F04 gene |
|
chr12_-_17176888 Show fit | 1.87 |
ENSMUST00000170580.1
|
potassium voltage-gated channel, subfamily F, member 1 |
|
chr5_-_136883115 Show fit | 1.87 |
ENSMUST00000057497.6
ENSMUST00000111103.1 |
collagen, type XXVI, alpha 1 |
|
chr3_-_104818539 Show fit | 1.86 |
ENSMUST00000106774.1
ENSMUST00000106775.1 ENSMUST00000166979.1 ENSMUST00000136148.1 |
Moloney leukemia virus 10 |
|
chr1_-_45503282 Show fit | 1.82 |
ENSMUST00000086430.4
|
collagen, type V, alpha 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 4.1 | GO:0098795 | mRNA cleavage involved in gene silencing by miRNA(GO:0035279) mRNA cleavage involved in gene silencing(GO:0098795) |
0.0 | 2.5 | GO:0010811 | positive regulation of cell-substrate adhesion(GO:0010811) |
0.8 | 2.4 | GO:0035585 | calcium-mediated signaling using extracellular calcium source(GO:0035585) |
0.1 | 2.3 | GO:0050774 | negative regulation of dendrite morphogenesis(GO:0050774) |
0.2 | 2.1 | GO:0060710 | chorio-allantoic fusion(GO:0060710) |
0.6 | 1.8 | GO:0090274 | positive regulation of somatostatin secretion(GO:0090274) |
0.5 | 1.8 | GO:1903225 | negative regulation of endodermal cell differentiation(GO:1903225) |
0.1 | 1.8 | GO:0035855 | megakaryocyte development(GO:0035855) |
0.1 | 1.7 | GO:0015747 | urate transport(GO:0015747) |
0.0 | 1.7 | GO:0048013 | ephrin receptor signaling pathway(GO:0048013) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.1 | GO:0000932 | cytoplasmic mRNA processing body(GO:0000932) |
0.6 | 2.4 | GO:0031095 | platelet dense tubular network membrane(GO:0031095) |
0.0 | 2.4 | GO:0097610 | cleavage furrow(GO:0032154) cell surface furrow(GO:0097610) |
0.0 | 2.0 | GO:0002102 | podosome(GO:0002102) |
0.0 | 1.9 | GO:0005581 | collagen trimer(GO:0005581) |
0.6 | 1.8 | GO:0005588 | collagen type V trimer(GO:0005588) |
0.0 | 1.8 | GO:0043195 | terminal bouton(GO:0043195) |
0.0 | 1.7 | GO:0008076 | voltage-gated potassium channel complex(GO:0008076) |
0.0 | 1.7 | GO:0005882 | intermediate filament(GO:0005882) |
0.0 | 1.7 | GO:0005901 | caveola(GO:0005901) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.1 | GO:0004386 | helicase activity(GO:0004386) |
0.0 | 2.4 | GO:0097110 | scaffold protein binding(GO:0097110) |
0.0 | 2.3 | GO:0030507 | spectrin binding(GO:0030507) |
0.3 | 2.2 | GO:0008131 | primary amine oxidase activity(GO:0008131) |
0.0 | 1.8 | GO:0005201 | extracellular matrix structural constituent(GO:0005201) |
0.0 | 1.8 | GO:0000980 | RNA polymerase II distal enhancer sequence-specific DNA binding(GO:0000980) |
0.0 | 1.8 | GO:0008528 | G-protein coupled peptide receptor activity(GO:0008528) |
0.2 | 1.7 | GO:0031730 | CCR5 chemokine receptor binding(GO:0031730) |
0.2 | 1.7 | GO:0031404 | chloride ion binding(GO:0031404) |
0.0 | 1.7 | GO:0046875 | ephrin receptor binding(GO:0046875) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.2 | NABA COLLAGENS | Genes encoding collagen proteins |
0.0 | 2.4 | PID RHOA PATHWAY | RhoA signaling pathway |
0.1 | 2.2 | PID ANTHRAX PATHWAY | Cellular roles of Anthrax toxin |
0.0 | 1.6 | SA PTEN PATHWAY | PTEN is a tumor suppressor that dephosphorylates the lipid messenger phosphatidylinositol triphosphate. |
0.0 | 1.2 | PID LKB1 PATHWAY | LKB1 signaling events |
0.0 | 1.2 | PID AR TF PATHWAY | Regulation of Androgen receptor activity |
0.1 | 1.0 | PID INTEGRIN4 PATHWAY | Alpha6 beta4 integrin-ligand interactions |
0.0 | 0.9 | ST GA12 PATHWAY | G alpha 12 Pathway |
0.0 | 0.9 | PID DELTA NP63 PATHWAY | Validated transcriptional targets of deltaNp63 isoforms |
0.0 | 0.9 | PID HEDGEHOG GLI PATHWAY | Hedgehog signaling events mediated by Gli proteins |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 4.1 | REACTOME PRE NOTCH TRANSCRIPTION AND TRANSLATION | Genes involved in Pre-NOTCH Transcription and Translation |
0.1 | 2.8 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
0.0 | 2.8 | REACTOME INTERFERON GAMMA SIGNALING | Genes involved in Interferon gamma signaling |
0.1 | 2.6 | REACTOME KERATAN SULFATE BIOSYNTHESIS | Genes involved in Keratan sulfate biosynthesis |
0.0 | 2.3 | REACTOME NCAM1 INTERACTIONS | Genes involved in NCAM1 interactions |
0.0 | 1.8 | REACTOME PEPTIDE LIGAND BINDING RECEPTORS | Genes involved in Peptide ligand-binding receptors |
0.1 | 1.7 | REACTOME ORGANIC CATION ANION ZWITTERION TRANSPORT | Genes involved in Organic cation/anion/zwitterion transport |
0.1 | 1.0 | REACTOME PASSIVE TRANSPORT BY AQUAPORINS | Genes involved in Passive Transport by Aquaporins |
0.0 | 1.0 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
0.0 | 0.8 | REACTOME GAP JUNCTION ASSEMBLY | Genes involved in Gap junction assembly |