avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Zfx | mm10_v2_chrX_-_94123087_94123159 | -0.50 | 1.9e-03 | Click! |
Zfp711 | mm10_v2_chrX_+_112615301_112615301 | -0.49 | 2.4e-03 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_-_88503952 Show fit | 8.40 |
ENSMUST00000020253.8
|
choline phosphotransferase 1 |
|
chr3_-_18243289 Show fit | 7.82 |
ENSMUST00000035625.6
|
cytochrome P450, family 7, subfamily b, polypeptide 1 |
|
chr4_+_43631935 Show fit | 7.38 |
ENSMUST00000030191.8
|
natriuretic peptide receptor 2 |
|
chr4_-_61674094 Show fit | 6.89 |
ENSMUST00000098040.3
|
major urinary protein 18 |
|
chr4_-_60222580 Show fit | 6.35 |
ENSMUST00000095058.4
ENSMUST00000163931.1 |
major urinary protein 8 |
|
chr10_-_88503912 Show fit | 6.16 |
ENSMUST00000117579.1
ENSMUST00000073783.5 |
choline phosphotransferase 1 |
|
chr4_+_63344548 Show fit | 5.96 |
ENSMUST00000030044.2
|
orosomucoid 1 |
|
chr4_-_60499332 Show fit | 5.74 |
ENSMUST00000135953.1
|
major urinary protein 1 |
|
chr7_-_97417730 Show fit | 5.53 |
ENSMUST00000043077.7
|
thyroid hormone responsive |
|
chr12_+_108334341 Show fit | 5.45 |
ENSMUST00000021684.4
|
cytochrome P450, family 46, subfamily a, polypeptide 1 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
3.1 | 18.7 | GO:0006663 | platelet activating factor biosynthetic process(GO:0006663) |
1.4 | 14.5 | GO:1900194 | negative regulation of oocyte maturation(GO:1900194) |
0.4 | 14.5 | GO:0031146 | SCF-dependent proteasomal ubiquitin-dependent protein catabolic process(GO:0031146) |
0.3 | 12.8 | GO:0043171 | peptide catabolic process(GO:0043171) |
0.1 | 12.6 | GO:0042787 | protein ubiquitination involved in ubiquitin-dependent protein catabolic process(GO:0042787) |
0.2 | 11.3 | GO:0070936 | protein K48-linked ubiquitination(GO:0070936) |
0.2 | 9.7 | GO:0006890 | retrograde vesicle-mediated transport, Golgi to ER(GO:0006890) |
0.2 | 9.6 | GO:0097031 | NADH dehydrogenase complex assembly(GO:0010257) mitochondrial respiratory chain complex I assembly(GO:0032981) mitochondrial respiratory chain complex I biogenesis(GO:0097031) |
1.0 | 9.4 | GO:0035754 | B cell chemotaxis(GO:0035754) |
0.2 | 9.4 | GO:0006749 | glutathione metabolic process(GO:0006749) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 141.6 | GO:0005739 | mitochondrion(GO:0005739) |
0.2 | 31.3 | GO:0005777 | peroxisome(GO:0005777) microbody(GO:0042579) |
0.2 | 22.5 | GO:0030176 | integral component of endoplasmic reticulum membrane(GO:0030176) |
0.1 | 20.4 | GO:0045177 | apical part of cell(GO:0045177) |
0.3 | 16.2 | GO:0031228 | intrinsic component of Golgi membrane(GO:0031228) |
0.2 | 12.5 | GO:0019005 | SCF ubiquitin ligase complex(GO:0019005) |
0.6 | 10.8 | GO:0012510 | trans-Golgi network transport vesicle membrane(GO:0012510) |
0.1 | 10.1 | GO:0005765 | lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852) |
0.4 | 10.0 | GO:0005782 | peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907) |
0.2 | 9.9 | GO:0009295 | nucleoid(GO:0009295) mitochondrial nucleoid(GO:0042645) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 38.0 | GO:0061630 | ubiquitin protein ligase activity(GO:0061630) |
0.3 | 21.9 | GO:0008395 | steroid hydroxylase activity(GO:0008395) |
3.9 | 19.4 | GO:0004142 | diacylglycerol cholinephosphotransferase activity(GO:0004142) |
0.2 | 16.4 | GO:0101005 | thiol-dependent ubiquitinyl hydrolase activity(GO:0036459) ubiquitinyl hydrolase activity(GO:0101005) |
2.4 | 12.1 | GO:0016941 | natriuretic peptide receptor activity(GO:0016941) |
0.5 | 11.6 | GO:0070006 | metalloaminopeptidase activity(GO:0070006) |
0.2 | 11.5 | GO:0035064 | methylated histone binding(GO:0035064) |
0.0 | 11.4 | GO:0019787 | ubiquitin-like protein transferase activity(GO:0019787) |
0.3 | 11.3 | GO:0016709 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen(GO:0016709) |
0.3 | 10.6 | GO:0016896 | exoribonuclease activity, producing 5'-phosphomonoesters(GO:0016896) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 14.4 | PID IL1 PATHWAY | IL1-mediated signaling events |
0.1 | 10.6 | PID LKB1 PATHWAY | LKB1 signaling events |
0.2 | 10.5 | PID HNF3A PATHWAY | FOXA1 transcription factor network |
0.1 | 8.2 | PID CERAMIDE PATHWAY | Ceramide signaling pathway |
0.3 | 7.3 | PID HIF1A PATHWAY | Hypoxic and oxygen homeostasis regulation of HIF-1-alpha |
0.1 | 6.7 | ST JNK MAPK PATHWAY | JNK MAPK Pathway |
0.2 | 5.7 | PID BETA CATENIN DEG PATHWAY | Degradation of beta catenin |
0.2 | 5.6 | PID ARF 3PATHWAY | Arf1 pathway |
0.1 | 5.2 | PID FOXO PATHWAY | FoxO family signaling |
0.0 | 5.0 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 24.2 | REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION | Genes involved in Antigen processing: Ubiquitination & Proteasome degradation |
0.5 | 17.2 | REACTOME FATTY ACYL COA BIOSYNTHESIS | Genes involved in Fatty Acyl-CoA Biosynthesis |
1.2 | 15.9 | REACTOME ENDOGENOUS STEROLS | Genes involved in Endogenous sterols |
0.1 | 15.2 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.5 | 14.9 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |
0.2 | 14.1 | REACTOME RESPIRATORY ELECTRON TRANSPORT | Genes involved in Respiratory electron transport |
0.5 | 13.1 | REACTOME SULFUR AMINO ACID METABOLISM | Genes involved in Sulfur amino acid metabolism |
0.2 | 12.7 | REACTOME METABOLISM OF VITAMINS AND COFACTORS | Genes involved in Metabolism of vitamins and cofactors |
0.8 | 11.5 | REACTOME VITAMIN B5 PANTOTHENATE METABOLISM | Genes involved in Vitamin B5 (pantothenate) metabolism |
0.2 | 11.0 | REACTOME REGULATION OF ORNITHINE DECARBOXYLASE ODC | Genes involved in Regulation of ornithine decarboxylase (ODC) |