avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Zic3 | mm10_v2_chrX_+_58030622_58030643 | 0.38 | 2.2e-02 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr7_+_24370255 Show fit | 3.83 |
ENSMUST00000171904.1
|
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 |
|
chr18_-_78142119 Show fit | 3.64 |
ENSMUST00000160639.1
|
solute carrier family 14 (urea transporter), member 1 |
|
chr12_-_76709997 Show fit | 3.41 |
ENSMUST00000166101.1
|
spectrin beta, erythrocytic |
|
chrX_+_73639414 Show fit | 3.25 |
ENSMUST00000019701.8
|
dual specificity phosphatase 9 |
|
chr11_+_115899943 Show fit | 3.17 |
ENSMUST00000152171.1
|
small integral membrane protein 5 |
|
chr11_+_115900125 Show fit | 2.94 |
ENSMUST00000142089.1
ENSMUST00000131566.1 |
small integral membrane protein 5 |
|
chr11_+_72999069 Show fit | 2.64 |
ENSMUST00000021141.7
|
purinergic receptor P2X, ligand-gated ion channel, 1 |
|
chr7_-_17062384 Show fit | 2.61 |
ENSMUST00000153833.1
ENSMUST00000108492.2 |
hypoxia inducible factor 3, alpha subunit |
|
chr2_-_170427828 Show fit | 2.36 |
ENSMUST00000013667.2
ENSMUST00000109152.2 ENSMUST00000068137.4 |
breast carcinoma amplified sequence 1 |
|
chr8_+_94329192 Show fit | 2.17 |
ENSMUST00000034218.3
|
solute carrier family 12, member 3 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.3 | 3.8 | GO:0050862 | positive regulation of T cell receptor signaling pathway(GO:0050862) |
0.2 | 3.7 | GO:0000188 | inactivation of MAPK activity(GO:0000188) |
1.2 | 3.6 | GO:0071918 | urea transmembrane transport(GO:0071918) |
0.9 | 3.5 | GO:0035524 | proline transmembrane transport(GO:0035524) |
0.5 | 3.3 | GO:0002528 | regulation of vascular permeability involved in acute inflammatory response(GO:0002528) |
0.1 | 3.3 | GO:0006779 | porphyrin-containing compound biosynthetic process(GO:0006779) |
0.5 | 2.6 | GO:0002554 | serotonin secretion by platelet(GO:0002554) |
0.2 | 2.6 | GO:0051574 | positive regulation of histone H3-K9 methylation(GO:0051574) |
0.0 | 2.6 | GO:0010811 | positive regulation of cell-substrate adhesion(GO:0010811) |
0.3 | 2.5 | GO:0006268 | DNA unwinding involved in DNA replication(GO:0006268) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 6.6 | GO:0016324 | apical plasma membrane(GO:0016324) |
0.5 | 3.4 | GO:0008091 | spectrin(GO:0008091) |
0.1 | 2.9 | GO:0035098 | ESC/E(Z) complex(GO:0035098) |
0.9 | 2.6 | GO:0030312 | external encapsulating structure(GO:0030312) |
0.2 | 2.5 | GO:0042555 | MCM complex(GO:0042555) |
0.2 | 2.1 | GO:0097165 | nuclear stress granule(GO:0097165) |
0.0 | 2.1 | GO:0005604 | basement membrane(GO:0005604) |
0.1 | 1.9 | GO:0043083 | synaptic cleft(GO:0043083) |
0.0 | 1.7 | GO:0005581 | collagen trimer(GO:0005581) |
0.2 | 1.5 | GO:0072379 | BAT3 complex(GO:0071818) ER membrane insertion complex(GO:0072379) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.0 | 3.8 | GO:0016286 | small conductance calcium-activated potassium channel activity(GO:0016286) |
0.6 | 3.6 | GO:0015265 | urea channel activity(GO:0015265) |
0.3 | 3.5 | GO:0015193 | L-proline transmembrane transporter activity(GO:0015193) |
0.5 | 3.3 | GO:0004687 | myosin light chain kinase activity(GO:0004687) |
0.1 | 2.9 | GO:0043325 | phosphatidylinositol-3,4-bisphosphate binding(GO:0043325) |
0.3 | 2.8 | GO:0015377 | cation:chloride symporter activity(GO:0015377) |
0.2 | 2.8 | GO:0017017 | MAP kinase tyrosine/serine/threonine phosphatase activity(GO:0017017) |
0.0 | 2.7 | GO:0008201 | heparin binding(GO:0008201) |
0.4 | 2.6 | GO:0035381 | extracellular ATP-gated cation channel activity(GO:0004931) ATP-gated ion channel activity(GO:0035381) |
0.1 | 2.6 | GO:0017091 | AU-rich element binding(GO:0017091) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.8 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.1 | 3.7 | ST ERK1 ERK2 MAPK PATHWAY | ERK1/ERK2 MAPK Pathway |
0.1 | 3.6 | PID PLK1 PATHWAY | PLK1 signaling events |
0.0 | 2.9 | PID MYC REPRESS PATHWAY | Validated targets of C-MYC transcriptional repression |
0.1 | 2.6 | PID HIF1A PATHWAY | Hypoxic and oxygen homeostasis regulation of HIF-1-alpha |
0.1 | 2.5 | PID ATR PATHWAY | ATR signaling pathway |
0.1 | 2.5 | NABA BASEMENT MEMBRANES | Genes encoding structural components of basement membranes |
0.0 | 2.5 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.0 | 2.3 | PID PI3KCI PATHWAY | Class I PI3K signaling events |
0.0 | 2.1 | PID HEDGEHOG GLI PATHWAY | Hedgehog signaling events mediated by Gli proteins |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.4 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.1 | 3.1 | REACTOME AMINE COMPOUND SLC TRANSPORTERS | Genes involved in Amine compound SLC transporters |
0.0 | 2.7 | REACTOME SIGNALING BY RHO GTPASES | Genes involved in Signaling by Rho GTPases |
0.3 | 2.6 | REACTOME ELEVATION OF CYTOSOLIC CA2 LEVELS | Genes involved in Elevation of cytosolic Ca2+ levels |
0.1 | 2.6 | REACTOME OXYGEN DEPENDENT PROLINE HYDROXYLATION OF HYPOXIA INDUCIBLE FACTOR ALPHA | Genes involved in Oxygen-dependent Proline Hydroxylation of Hypoxia-inducible Factor Alpha |
0.2 | 2.5 | REACTOME UNWINDING OF DNA | Genes involved in Unwinding of DNA |
0.0 | 2.5 | REACTOME POTASSIUM CHANNELS | Genes involved in Potassium Channels |
0.1 | 1.9 | REACTOME SYNTHESIS OF PC | Genes involved in Synthesis of PC |
0.1 | 1.8 | REACTOME PURINE SALVAGE | Genes involved in Purine salvage |
0.0 | 1.8 | REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES | Genes involved in Loss of Nlp from mitotic centrosomes |