avrg: GSE58827: Dynamics of the Mouse Liver
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
Zkscan1 | mm10_v2_chr5_+_138085083_138085147 | -0.18 | 3.0e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr10_+_79881023 Show fit | 5.90 |
ENSMUST00000166201.1
|
proteinase 3 |
|
chr2_+_84734050 Show fit | 4.60 |
ENSMUST00000090729.2
|
yippee-like 4 (Drosophila) |
|
chrX_-_49797700 Show fit | 4.06 |
ENSMUST00000033442.7
ENSMUST00000114891.1 |
immunoglobulin superfamily, member 1 |
|
chr2_+_153492790 Show fit | 3.79 |
ENSMUST00000109783.1
|
RIKEN cDNA 4930404H24 gene |
|
chr15_-_74983430 Show fit | 3.50 |
ENSMUST00000023250.4
ENSMUST00000166694.1 |
lymphocyte antigen 6 complex, locus I |
|
chr15_-_75111684 Show fit | 3.40 |
ENSMUST00000100542.3
|
lymphocyte antigen 6 complex, locus C2 |
|
chr9_+_51213683 Show fit | 3.15 |
ENSMUST00000034554.7
|
POU domain, class 2, associating factor 1 |
|
chr19_-_61228396 Show fit | 3.06 |
ENSMUST00000076046.6
|
colony stimulating factor 2 receptor, alpha, low-affinity (granulocyte-macrophage) |
|
chr7_+_24370255 Show fit | 3.04 |
ENSMUST00000171904.1
|
potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4 |
|
chr9_-_103480328 Show fit | 2.85 |
ENSMUST00000124310.2
|
beaded filament structural protein 2, phakinin |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
1.2 | 5.9 | GO:0097029 | mature conventional dendritic cell differentiation(GO:0097029) |
0.1 | 4.8 | GO:0035411 | catenin import into nucleus(GO:0035411) |
0.2 | 2.9 | GO:0070307 | lens fiber cell development(GO:0070307) |
0.2 | 2.8 | GO:0050862 | positive regulation of T cell receptor signaling pathway(GO:0050862) |
0.1 | 2.8 | GO:0008340 | determination of adult lifespan(GO:0008340) |
0.1 | 2.4 | GO:0097011 | cellular response to granulocyte macrophage colony-stimulating factor stimulus(GO:0097011) |
0.3 | 2.3 | GO:0060753 | regulation of mast cell chemotaxis(GO:0060753) |
0.0 | 2.3 | GO:0051693 | actin filament capping(GO:0051693) |
0.3 | 2.1 | GO:1901164 | negative regulation of trophoblast cell migration(GO:1901164) |
0.0 | 2.1 | GO:0045921 | positive regulation of exocytosis(GO:0045921) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.7 | GO:0031225 | anchored component of membrane(GO:0031225) |
0.0 | 3.6 | GO:0005882 | intermediate filament(GO:0005882) |
0.0 | 2.4 | GO:0090575 | RNA polymerase II transcription factor complex(GO:0090575) |
0.0 | 2.3 | GO:0005884 | actin filament(GO:0005884) |
0.1 | 2.1 | GO:0031045 | dense core granule(GO:0031045) |
0.0 | 1.7 | GO:0072562 | blood microparticle(GO:0072562) |
0.0 | 1.6 | GO:0005581 | collagen trimer(GO:0005581) |
0.1 | 1.3 | GO:0000796 | condensin complex(GO:0000796) |
0.0 | 1.3 | GO:0030125 | clathrin vesicle coat(GO:0030125) |
0.0 | 1.3 | GO:0030136 | clathrin-coated vesicle(GO:0030136) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 4.1 | GO:0034711 | inhibin binding(GO:0034711) |
0.0 | 3.4 | GO:0019955 | cytokine binding(GO:0019955) |
0.0 | 3.2 | GO:0001105 | RNA polymerase II transcription coactivator activity(GO:0001105) |
0.8 | 3.0 | GO:0016286 | small conductance calcium-activated potassium channel activity(GO:0016286) |
0.1 | 2.9 | GO:0005212 | structural constituent of eye lens(GO:0005212) |
0.0 | 2.4 | GO:0051015 | actin filament binding(GO:0051015) |
0.0 | 2.2 | GO:0004252 | serine-type endopeptidase activity(GO:0004252) |
0.1 | 1.8 | GO:0008191 | metalloendopeptidase inhibitor activity(GO:0008191) |
0.0 | 1.6 | GO:0005245 | voltage-gated calcium channel activity(GO:0005245) |
0.1 | 1.3 | GO:0019911 | structural constituent of myelin sheath(GO:0019911) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 7.2 | PID CMYB PATHWAY | C-MYB transcription factor network |
0.1 | 3.7 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
0.0 | 2.3 | PID IL8 CXCR2 PATHWAY | IL8- and CXCR2-mediated signaling events |
0.0 | 2.1 | PID IL6 7 PATHWAY | IL6-mediated signaling events |
0.0 | 2.1 | ST FAS SIGNALING PATHWAY | Fas Signaling Pathway |
0.0 | 2.0 | PID SMAD2 3NUCLEAR PATHWAY | Regulation of nuclear SMAD2/3 signaling |
0.0 | 1.7 | SIG REGULATION OF THE ACTIN CYTOSKELETON BY RHO GTPASES | Genes related to regulation of the actin cytoskeleton |
0.0 | 1.5 | PID RAS PATHWAY | Regulation of Ras family activation |
0.0 | 1.2 | PID SYNDECAN 1 PATHWAY | Syndecan-1-mediated signaling events |
0.0 | 1.1 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 3.1 | REACTOME IL RECEPTOR SHC SIGNALING | Genes involved in Interleukin receptor SHC signaling |
0.0 | 3.0 | REACTOME POTASSIUM CHANNELS | Genes involved in Potassium Channels |
0.1 | 2.3 | REACTOME SEMA4D INDUCED CELL MIGRATION AND GROWTH CONE COLLAPSE | Genes involved in Sema4D induced cell migration and growth-cone collapse |
0.1 | 2.1 | REACTOME DEGRADATION OF THE EXTRACELLULAR MATRIX | Genes involved in Degradation of the extracellular matrix |
0.0 | 1.8 | REACTOME DOWNREGULATION OF SMAD2 3 SMAD4 TRANSCRIPTIONAL ACTIVITY | Genes involved in Downregulation of SMAD2/3:SMAD4 transcriptional activity |
0.0 | 1.7 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.0 | 1.2 | REACTOME EXTRACELLULAR MATRIX ORGANIZATION | Genes involved in Extracellular matrix organization |
0.0 | 1.1 | REACTOME BRANCHED CHAIN AMINO ACID CATABOLISM | Genes involved in Branched-chain amino acid catabolism |
0.0 | 1.1 | REACTOME MUSCLE CONTRACTION | Genes involved in Muscle contraction |
0.0 | 1.0 | REACTOME MITOTIC PROMETAPHASE | Genes involved in Mitotic Prometaphase |