Inflammatory response time course, HUVEC (Wada, 2009)

• Motif significance table
• Sample table
• Mean activities
• All promoters sorted by FOV

• Activity table
• Activity delta table
• Regulatory interactions
• Motifs sorted by significance
• Download the whole report

Gene Symbol	Gene ID	Gene Info
BRCA1 Links Ensembl NCBI GeneCards UniProt	ENSG00000012048.23	BRCA1

Gene	Promoter	Pearson corr. coef.	P-value	Plot
BRCA1	hg38_v1_chr17_-_43125450_43125493	-0.50	1.1e-02	Click!

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Promoter	Score	Transcript	Gene	Gene Info
chr1_+_84181630 Show fit	0.31	ENST00000610457.1	PRKACB Links Ensembl NCBI GeneCards UniProt Show fit	protein kinase cAMP-activated catalytic subunit beta
chr8_-_80171106 Show fit	0.29	ENST00000519303.6	TPD52 Links Ensembl NCBI GeneCards UniProt Show fit	tumor protein D52
chr2_+_108378176 Show fit	0.26	ENST00000409309.3	SULT1C4 Links Ensembl NCBI GeneCards UniProt Show fit	sulfotransferase family 1C member 4
chr2_+_108377947 Show fit	0.24	ENST00000272452.7	SULT1C4 Links Ensembl NCBI GeneCards UniProt Show fit	sulfotransferase family 1C member 4
chr18_+_44697118 Show fit	0.23	ENST00000677077.1	SETBP1 Links Ensembl NCBI GeneCards UniProt Show fit	SET binding protein 1
chr17_-_43661915 Show fit	0.21	ENST00000318579.9 ENST00000393661.2	MEOX1 Links Ensembl NCBI GeneCards UniProt Show fit	mesenchyme homeobox 1
chr7_+_100119607 Show fit	0.18	ENST00000262932.5	CNPY4 Links Ensembl NCBI GeneCards UniProt Show fit	canopy FGF signaling regulator 4
chr1_-_160262501 Show fit	0.15	ENST00000447377.5	DCAF8 Links Ensembl NCBI GeneCards UniProt Show fit	DDB1 and CUL4 associated factor 8
chr1_-_160262522 Show fit	0.15	ENST00000440682.5	DCAF8 Links Ensembl NCBI GeneCards UniProt Show fit	DDB1 and CUL4 associated factor 8
chr11_+_73308237 Show fit	0.12	ENST00000263674.4	ARHGEF17 Links Ensembl NCBI GeneCards UniProt Show fit	Rho guanine nucleotide exchange factor 17
chr13_-_51974775 Show fit	0.12	ENST00000674147.1	ATP7B Links Ensembl NCBI GeneCards UniProt Show fit	ATPase copper transporting beta
chr2_+_203014721 Show fit	0.10	ENST00000683091.1	NBEAL1 Links Ensembl NCBI GeneCards UniProt Show fit	neurobeachin like 1
chr2_+_203014842 Show fit	0.09	ENST00000683969.1 ENST00000449802.5	NBEAL1 Links Ensembl NCBI GeneCards UniProt Show fit	neurobeachin like 1
chr4_-_48780242 Show fit	0.09	ENST00000507711.5 ENST00000358350.9	FRYL Links Ensembl NCBI GeneCards UniProt Show fit	FRY like transcription coactivator
chr11_+_33258304 Show fit	0.09	ENST00000531504.5 ENST00000456517.2	HIPK3 Links Ensembl NCBI GeneCards UniProt Show fit	homeodomain interacting protein kinase 3
chr14_+_22040576 Show fit	0.08	ENST00000390448.3	TRAV20 Links Ensembl NCBI GeneCards UniProt Show fit	T cell receptor alpha variable 20
chr20_+_58907981 Show fit	0.08	ENST00000656419.1	GNAS Links Ensembl NCBI GeneCards UniProt Show fit	GNAS complex locus
chr19_+_45467988 Show fit	0.08	ENST00000615753.4 ENST00000585836.5 ENST00000417353.6 ENST00000591858.5 ENST00000443841.6 ENST00000590335.1 ENST00000353609.8	FOSB Links Ensembl NCBI GeneCards UniProt Show fit	FosB proto-oncogene, AP-1 transcription factor subunit
chr12_-_95116967 Show fit	0.08	ENST00000551521.5	FGD6 Links Ensembl NCBI GeneCards UniProt Show fit	FYVE, RhoGEF and PH domain containing 6
chr10_+_47322450 Show fit	0.08	ENST00000581492.3	GDF2 Links Ensembl NCBI GeneCards UniProt Show fit	growth differentiation factor 2
chrX_+_10156960 Show fit	0.07	ENST00000380833.9	CLCN4 Links Ensembl NCBI GeneCards UniProt Show fit	chloride voltage-gated channel 4
chrX_-_10833643 Show fit	0.07	ENST00000380785.5 ENST00000380787.5	MID1 Links Ensembl NCBI GeneCards UniProt Show fit	midline 1
chr20_+_33161768 Show fit	0.07	ENST00000253362.6	BPIFA2 Links Ensembl NCBI GeneCards UniProt Show fit	BPI fold containing family A member 2
chr12_-_122395422 Show fit	0.06	ENST00000540304.6	CLIP1 Links Ensembl NCBI GeneCards UniProt Show fit	CAP-Gly domain containing linker protein 1
chr10_-_73625951 Show fit	0.06	ENST00000433394.1 ENST00000422491.7	USP54 Links Ensembl NCBI GeneCards UniProt Show fit	ubiquitin specific peptidase 54
chr19_+_48469354 Show fit	0.06	ENST00000452733.7 ENST00000641098.1	CYTH2 Links Ensembl NCBI GeneCards UniProt Show fit	cytohesin 2
chrX_-_71068384 Show fit	0.06	ENST00000276105.3 ENST00000622259.4	SNX12 Links Ensembl NCBI GeneCards UniProt Show fit	sorting nexin 12
chr14_+_102592611 Show fit	0.06	ENST00000262241.7	RCOR1 Links Ensembl NCBI GeneCards UniProt Show fit	REST corepressor 1
chr19_-_12801787 Show fit	0.05	ENST00000334482.9 ENST00000301522.3	PRDX2 Links Ensembl NCBI GeneCards UniProt Show fit	peroxiredoxin 2
chr2_-_151261839 Show fit	0.05	ENST00000331426.6	RBM43 Links Ensembl NCBI GeneCards UniProt Show fit	RNA binding motif protein 43
chr11_-_72112750 Show fit	0.05	ENST00000545680.5 ENST00000543587.5 ENST00000538393.5 ENST00000535234.5 ENST00000227618.8 ENST00000535503.5	ANAPC15 Links Ensembl NCBI GeneCards UniProt Show fit	anaphase promoting complex subunit 15
chr14_+_63761836 Show fit	0.04	ENST00000674003.1	SYNE2 Links Ensembl NCBI GeneCards UniProt Show fit	spectrin repeat containing nuclear envelope protein 2
chr8_-_17002327 Show fit	0.04	ENST00000180166.6	FGF20 Links Ensembl NCBI GeneCards UniProt Show fit	fibroblast growth factor 20
chr8_+_22165140 Show fit	0.04	ENST00000397814.7 ENST00000354870.5	BMP1 Links Ensembl NCBI GeneCards UniProt Show fit	bone morphogenetic protein 1
chr14_-_94476211 Show fit	0.04	ENST00000298845.12	SERPINA9 Links Ensembl NCBI GeneCards UniProt Show fit	serpin family A member 9
chr13_+_29428709 Show fit	0.04	ENST00000542829.1	MTUS2 Links Ensembl NCBI GeneCards UniProt Show fit	microtubule associated scaffold protein 2
chr1_-_160262407 Show fit	0.04	ENST00000419626.1 ENST00000610139.5 ENST00000475733.5 ENST00000407642.6 ENST00000368073.7 ENST00000326837.6	DCAF8 Links Ensembl NCBI GeneCards UniProt Show fit	DDB1 and CUL4 associated factor 8
chr14_-_94476190 Show fit	0.04	ENST00000674397.2 ENST00000448305.6	SERPINA9 Links Ensembl NCBI GeneCards UniProt Show fit	serpin family A member 9
chr11_+_118077009 Show fit	0.03	ENST00000616579.4 ENST00000534111.5	TMPRSS4 Links Ensembl NCBI GeneCards UniProt Show fit	transmembrane serine protease 4
chr12_-_80937918 Show fit	0.03	ENST00000552864.6	LIN7A Links Ensembl NCBI GeneCards UniProt Show fit	lin-7 homolog A, crumbs cell polarity complex component
chr1_-_160262540 Show fit	0.03	ENST00000368074.6	DCAF8 Links Ensembl NCBI GeneCards UniProt Show fit	DDB1 and CUL4 associated factor 8
chr6_-_158999748 Show fit	0.03	ENST00000449822.5	RSPH3 Links Ensembl NCBI GeneCards UniProt Show fit	radial spoke head 3
chr1_-_17045219 Show fit	0.03	ENST00000491274.5	SDHB Links Ensembl NCBI GeneCards UniProt Show fit	succinate dehydrogenase complex iron sulfur subunit B
chr7_-_100119323 Show fit	0.03	ENST00000523306.5 ENST00000344095.8 ENST00000417349.5 ENST00000493322.5 ENST00000520135.5 ENST00000460673.2 ENST00000453269.7 ENST00000452041.5 ENST00000452438.6 ENST00000451699.5	TAF6 Links Ensembl NCBI GeneCards UniProt Show fit	TATA-box binding protein associated factor 6
chr10_-_49269 Show fit	0.03	ENST00000562809.1 ENST00000568866.5 ENST00000561967.1 ENST00000568584.6	TUBB8 Links Ensembl NCBI GeneCards UniProt Show fit	tubulin beta 8 class VIII
chr2_+_135741814 Show fit	0.03	ENST00000272638.14	UBXN4 Links Ensembl NCBI GeneCards UniProt Show fit	UBX domain protein 4
chr9_-_21031614 Show fit	0.03	ENST00000495827.3	HACD4 Links Ensembl NCBI GeneCards UniProt Show fit	3-hydroxyacyl-CoA dehydratase 4
chr2_-_49973939 Show fit	0.03	ENST00000630656.1	NRXN1 Links Ensembl NCBI GeneCards UniProt Show fit	neurexin 1
chr5_+_154941063 Show fit	0.03	ENST00000523037.6 ENST00000265229.12 ENST00000439747.7 ENST00000522038.5	MRPL22 Links Ensembl NCBI GeneCards UniProt Show fit	mitochondrial ribosomal protein L22
chr1_+_161766282 Show fit	0.03	ENST00000680688.1	ATF6 Links Ensembl NCBI GeneCards UniProt Show fit	activating transcription factor 6
chr2_-_157325808 Show fit	0.02	ENST00000410096.6 ENST00000420719.6 ENST00000409216.5 ENST00000419116.2	ERMN Links Ensembl NCBI GeneCards UniProt Show fit	ermin
chr4_+_625555 Show fit	0.02	ENST00000496514.6 ENST00000255622.10	PDE6B Links Ensembl NCBI GeneCards UniProt Show fit	phosphodiesterase 6B
chr9_-_92424427 Show fit	0.02	ENST00000375550.5	OMD Links Ensembl NCBI GeneCards UniProt Show fit	osteomodulin
chr3_+_184338826 Show fit	0.02	ENST00000453072.5	FAM131A Links Ensembl NCBI GeneCards UniProt Show fit	family with sequence similarity 131 member A
chr11_+_118077067 Show fit	0.02	ENST00000522307.5 ENST00000523251.5 ENST00000437212.8 ENST00000522824.5 ENST00000522151.5	TMPRSS4 Links Ensembl NCBI GeneCards UniProt Show fit	transmembrane serine protease 4
chr11_-_61430008 Show fit	0.02	ENST00000394888.8	CPSF7 Links Ensembl NCBI GeneCards UniProt Show fit	cleavage and polyadenylation specific factor 7
chr19_+_46347063 Show fit	0.02	ENST00000012443.9 ENST00000391919.1	PPP5C Links Ensembl NCBI GeneCards UniProt Show fit	protein phosphatase 5 catalytic subunit
chr14_+_20190896 Show fit	0.02	ENST00000641879.2 ENST00000641682.1	OR11G2 Links Ensembl NCBI GeneCards UniProt Show fit	olfactory receptor family 11 subfamily G member 2
chr8_+_22165358 Show fit	0.01	ENST00000306349.13 ENST00000306385.10	BMP1 Links Ensembl NCBI GeneCards UniProt Show fit	bone morphogenetic protein 1
chr5_+_146203544 Show fit	0.01	ENST00000506502.2	ENSG00000275740.1 Links Ensembl NCBI GeneCards UniProt Show fit	novel readthrough transcript
chr16_-_740980 Show fit	0.01	ENST00000251588.7	CIAO3 Links Ensembl NCBI GeneCards UniProt Show fit	cytosolic iron-sulfur assembly component 3
chr16_-_740934 Show fit	0.01	ENST00000540986.5	CIAO3 Links Ensembl NCBI GeneCards UniProt Show fit	cytosolic iron-sulfur assembly component 3
chr6_-_43014254 Show fit	0.01	ENST00000642748.1	MEA1 Links Ensembl NCBI GeneCards UniProt Show fit	male-enhanced antigen 1
chr20_-_35438218 Show fit	0.01	ENST00000374369.8	GDF5 Links Ensembl NCBI GeneCards UniProt Show fit	growth differentiation factor 5
chrX_-_71068311 Show fit	0.01	ENST00000374274.8	SNX12 Links Ensembl NCBI GeneCards UniProt Show fit	sorting nexin 12
chr6_-_170553216 Show fit	0.01	ENST00000262193.7	PSMB1 Links Ensembl NCBI GeneCards UniProt Show fit	proteasome 20S subunit beta 1
chr12_-_95942592 Show fit	0.01	ENST00000546947.5 ENST00000344280.8 ENST00000546386.1	CCDC38 Links Ensembl NCBI GeneCards UniProt Show fit	coiled-coil domain containing 38
chr2_-_144517663 Show fit	0.01	ENST00000427902.5 ENST00000462355.2 ENST00000470879.5 ENST00000409487.7 ENST00000435831.5 ENST00000630572.2	ZEB2 Links Ensembl NCBI GeneCards UniProt Show fit	zinc finger E-box binding homeobox 2
chr11_+_101914997 Show fit	0.01	ENST00000263468.13	CEP126 Links Ensembl NCBI GeneCards UniProt Show fit	centrosomal protein 126
chr1_+_160177386 Show fit	0.01	ENST00000470705.1	ATP1A4 Links Ensembl NCBI GeneCards UniProt Show fit	ATPase Na+/K+ transporting subunit alpha 4
chr19_+_55675191 Show fit	0.01	ENST00000270460.11 ENST00000085079.11	EPN1 Links Ensembl NCBI GeneCards UniProt Show fit	epsin 1
chr19_-_37172670 Show fit	0.01	ENST00000588354.1 ENST00000292841.10 ENST00000356958.8	ZNF585A Links Ensembl NCBI GeneCards UniProt Show fit	zinc finger protein 585A
chr2_+_98087160 Show fit	0.01	ENST00000477737.6	VWA3B Links Ensembl NCBI GeneCards UniProt Show fit	von Willebrand factor A domain containing 3B
chr12_-_24562438 Show fit	0.01	ENST00000646273.1 ENST00000659413.1 ENST00000446891.7	SOX5 Links Ensembl NCBI GeneCards UniProt Show fit	SRY-box transcription factor 5
chrX_-_77895414 Show fit	0.01	ENST00000618282.5 ENST00000373336.3	MAGT1 Links Ensembl NCBI GeneCards UniProt Show fit	magnesium transporter 1
chr11_-_61429934 Show fit	0.01	ENST00000541963.5 ENST00000477890.6 ENST00000439958.8	CPSF7 Links Ensembl NCBI GeneCards UniProt Show fit	cleavage and polyadenylation specific factor 7
chr6_+_33204645 Show fit	0.01	ENST00000374662.4	HSD17B8 Links Ensembl NCBI GeneCards UniProt Show fit	hydroxysteroid 17-beta dehydrogenase 8
chr12_-_116881062 Show fit	0.00	ENST00000550505.5	HRK Links Ensembl NCBI GeneCards UniProt Show fit	harakiri, BCL2 interacting protein
chrX_-_77895546 Show fit	0.00	ENST00000358075.11	MAGT1 Links Ensembl NCBI GeneCards UniProt Show fit	magnesium transporter 1
chr17_+_38752731 Show fit	0.00	ENST00000619426.5 ENST00000610434.4	PSMB3 Links Ensembl NCBI GeneCards UniProt Show fit	proteasome 20S subunit beta 3
chr14_-_59630806 Show fit	0.00	ENST00000342503.8	RTN1 Links Ensembl NCBI GeneCards UniProt Show fit	reticulon 1
chr1_-_41242106 Show fit	0.00	ENST00000337495.9 ENST00000372597.5 ENST00000372596.5	SCMH1 Links Ensembl NCBI GeneCards UniProt Show fit	Scm polycomb group protein homolog 1
chr10_+_91923762 Show fit	0.00	ENST00000265990.11	BTAF1 Links Ensembl NCBI GeneCards UniProt Show fit	B-TFIID TATA-box binding protein associated factor 1
chr13_+_27251545 Show fit	0.00	ENST00000311549.11	RPL21 Links Ensembl NCBI GeneCards UniProt Show fit	ribosomal protein L21
chr4_+_109827963 Show fit	0.00	ENST00000317735.7	RRH Links Ensembl NCBI GeneCards UniProt Show fit	retinal pigment epithelium-derived rhodopsin homolog
chr6_+_16129077 Show fit	0.00	ENST00000356840.8 ENST00000349606.4	MYLIP Links Ensembl NCBI GeneCards UniProt Show fit	myosin regulatory light chain interacting protein

Gene overrepresentation in biological process category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	GO:0097338	response to clozapine(GO:0097338)
0.0	0.2	GO:0001757	somite specification(GO:0001757) sclerotome development(GO:0061056)
0.0	0.1	GO:0060003	copper ion export(GO:0060003)
0.0	0.1	GO:2000642	negative regulation of early endosome to late endosome transport(GO:2000642)
0.0	0.5	GO:0006068	ethanol catabolic process(GO:0006068)
0.0	0.1	GO:0044861	protein transport into plasma membrane raft(GO:0044861)

Gene overrepresentation in cellular component category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.3	GO:0005952	cAMP-dependent protein kinase complex(GO:0005952)

Gene overrepresentation in molecular function category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.1	GO:0004008	copper-exporting ATPase activity(GO:0004008) copper-transporting ATPase activity(GO:0043682)
0.0	0.5	GO:0004062	aryl sulfotransferase activity(GO:0004062)
0.0	0.3	GO:0004691	cAMP-dependent protein kinase activity(GO:0004691)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target	Total log-likelihood	Term	Description
0.0	0.5	REACTOME CYTOSOLIC SULFONATION OF SMALL MOLECULES	Genes involved in Cytosolic sulfonation of small molecules