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Inflammatory response time course, HUVEC (Wada, 2009)
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Results for GAGAACU
Z-value: 0.07
Motif logo
miRNA associated with seed GAGAACU
| Name | miRBASE accession |
|---|---|
|
hsa-miR-146a-5p
|
MIMAT0000449 |
|
hsa-miR-146b-5p
|
MIMAT0002809 |
|
hsa-miR-7153-5p
|
MIMAT0028216 |
Activity profile of GAGAACU motif
Sorted Z-values of GAGAACU motif
Network of associatons between targets according to the STRING database.
First level regulatory network of GAGAACU
| Promoter | Score | Transcript | Gene | Gene Info |
|---|---|---|---|---|
| chr6_+_116511626 | 0.08 |
ENST00000368599.4
|
CALHM5
|
calcium homeostasis modulator family member 5 |
| chr1_+_25616780 | 0.05 |
ENST00000374332.9
|
MAN1C1
|
mannosidase alpha class 1C member 1 |
| chr3_-_52445085 | 0.03 |
ENST00000475739.1
ENST00000231721.7 |
SEMA3G
|
semaphorin 3G |
| chr18_+_11981488 | 0.02 |
ENST00000269159.8
|
IMPA2
|
inositol monophosphatase 2 |
| chr22_-_37519528 | 0.02 |
ENST00000403299.5
|
CARD10
|
caspase recruitment domain family member 10 |
| chr8_-_88327475 | 0.02 |
ENST00000286614.11
|
MMP16
|
matrix metallopeptidase 16 |
| chr2_-_207166818 | 0.02 |
ENST00000423015.5
|
KLF7
|
Kruppel like factor 7 |
| chr13_+_26557659 | 0.01 |
ENST00000335327.6
ENST00000361042.8 ENST00000671038.1 |
WASF3
|
WASP family member 3 |
| chr9_+_68705230 | 0.01 |
ENST00000265382.8
|
PIP5K1B
|
phosphatidylinositol-4-phosphate 5-kinase type 1 beta |
| chr15_-_52529050 | 0.01 |
ENST00000399231.7
|
MYO5A
|
myosin VA |
| chr3_-_194369731 | 0.01 |
ENST00000428839.1
ENST00000347624.4 |
LRRC15
|
leucine rich repeat containing 15 |
| chrX_-_78139612 | 0.01 |
ENST00000341864.6
|
TAF9B
|
TATA-box binding protein associated factor 9b |
| chr3_+_11272413 | 0.01 |
ENST00000446450.6
ENST00000354956.9 ENST00000354449.7 ENST00000419112.5 |
ATG7
|
autophagy related 7 |
| chr17_-_1710368 | 0.01 |
ENST00000330676.8
|
TLCD2
|
TLC domain containing 2 |
| chr17_-_32342132 | 0.01 |
ENST00000577809.6
ENST00000225805.8 |
C17orf75
|
chromosome 17 open reading frame 75 |
| chr12_-_7872843 | 0.01 |
ENST00000340749.9
ENST00000535295.5 ENST00000539234.5 |
SLC2A14
|
solute carrier family 2 member 14 |
| chrX_-_41922992 | 0.01 |
ENST00000646120.2
ENST00000421587.8 ENST00000644770.1 ENST00000645566.1 ENST00000378166.9 ENST00000378158.6 ENST00000644219.1 ENST00000442742.7 ENST00000644347.1 |
CASK
|
calcium/calmodulin dependent serine protein kinase |
| chr2_+_112482133 | 0.01 |
ENST00000233336.7
|
TTL
|
tubulin tyrosine ligase |
| chr4_+_84583037 | 0.01 |
ENST00000295887.6
|
CDS1
|
CDP-diacylglycerol synthase 1 |
| chr13_+_99501464 | 0.01 |
ENST00000376387.5
|
TM9SF2
|
transmembrane 9 superfamily member 2 |
| chr1_-_179229671 | 0.00 |
ENST00000502732.6
ENST00000392043.4 |
ABL2
|
ABL proto-oncogene 2, non-receptor tyrosine kinase |
| chr5_+_10353668 | 0.00 |
ENST00000274140.10
ENST00000449913.6 ENST00000503788.5 |
MARCHF6
|
membrane associated ring-CH-type finger 6 |
| chr3_-_125375249 | 0.00 |
ENST00000484491.5
ENST00000492394.5 ENST00000471196.1 ENST00000468369.5 ENST00000485866.5 ENST00000360647.9 |
ZNF148
|
zinc finger protein 148 |
| chr2_+_84971093 | 0.00 |
ENST00000456682.1
ENST00000409785.9 |
KCMF1
|
potassium channel modulatory factor 1 |
| chr5_+_56909586 | 0.00 |
ENST00000285947.5
|
SETD9
|
SET domain containing 9 |
| chr17_-_39864304 | 0.00 |
ENST00000346872.8
|
IKZF3
|
IKAROS family zinc finger 3 |
| chr14_-_67674583 | 0.00 |
ENST00000554659.6
|
VTI1B
|
vesicle transport through interaction with t-SNAREs 1B |
| chr4_-_70839873 | 0.00 |
ENST00000545193.5
ENST00000254799.11 |
GRSF1
|
G-rich RNA sequence binding factor 1 |
| chr6_+_149566356 | 0.00 |
ENST00000367419.10
|
GINM1
|
glycoprotein integral membrane 1 |
| chr7_+_30284574 | 0.00 |
ENST00000323037.5
|
ZNRF2
|
zinc and ring finger 2 |
| chr18_+_22169580 | 0.00 |
ENST00000269216.10
|
GATA6
|
GATA binding protein 6 |
| chr6_+_159969070 | 0.00 |
ENST00000356956.6
|
IGF2R
|
insulin like growth factor 2 receptor |
| chr20_+_64164446 | 0.00 |
ENST00000328439.6
|
MYT1
|
myelin transcription factor 1 |
| chr14_-_53152371 | 0.00 |
ENST00000323669.10
|
DDHD1
|
DDHD domain containing 1 |
| chr17_-_8152380 | 0.00 |
ENST00000317276.9
|
PER1
|
period circadian regulator 1 |
| chr1_+_32108035 | 0.00 |
ENST00000373625.8
|
KPNA6
|
karyopherin subunit alpha 6 |
| chr6_-_89412219 | 0.00 |
ENST00000369415.9
|
RRAGD
|
Ras related GTP binding D |
| chr12_+_118981531 | 0.00 |
ENST00000267260.5
|
SRRM4
|
serine/arginine repetitive matrix 4 |
| chr16_-_69334871 | 0.00 |
ENST00000562949.1
|
ENSG00000272617.3
|
novel protein, COG8-PDF readthrough |
| chr22_+_28883564 | 0.00 |
ENST00000544604.7
|
ZNRF3
|
zinc and ring finger 3 |
| chr9_-_34589701 | 0.00 |
ENST00000351266.8
|
CNTFR
|
ciliary neurotrophic factor receptor |
Gene Ontology Analysis
Gene overrepresentation in biological process category:
| Log-likelihood per target | Total log-likelihood | Term | Description |
|---|---|---|---|
| 0.0 | 0.0 | GO:1904381 | Golgi apparatus mannose trimming(GO:1904381) |