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Inflammatory response time course, HUVEC (Wada, 2009)

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Results for GAGAUGA

Z-value: 0.22

Motif logo

logo of

miRNA associated with seed GAGAUGA

NamemiRBASE accession
hsa-miR-143-3p
MIMAT0000435
hsa-miR-4770
MIMAT0019924
hsa-miR-6088
MIMAT0023713

Activity profile of GAGAUGA motif

Sorted Z-values of GAGAUGA motif

Network of associatons between targets according to the STRING database.

First level regulatory network of GAGAUGA

PNG image of the network

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Top targets:

Promoter Score Transcript Gene Gene Info
chr14_+_76761453 0.57 ENST00000167106.9
VASH1
vasohibin 1
chr5_-_100903252 0.56 ENST00000231461.10
ST8SIA4
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4
chr2_+_28392802 0.35 ENST00000379619.5
ENST00000264716.9
FOSL2
FOS like 2, AP-1 transcription factor subunit
chr2_+_45651650 0.33 ENST00000306156.8
PRKCE
protein kinase C epsilon
chr17_+_49788672 0.30 ENST00000454930.6
ENST00000259021.9
ENST00000509773.5
ENST00000510819.5
ENST00000424009.6
KAT7
lysine acetyltransferase 7
chr9_+_76459152 0.27 ENST00000444201.6
ENST00000376730.5
GCNT1
glucosaminyl (N-acetyl) transferase 1
chr4_+_86934976 0.25 ENST00000507468.5
ENST00000395146.9
AFF1
AF4/FMR2 family member 1
chr18_+_79395856 0.25 ENST00000253506.9
ENST00000591814.5
ENST00000427363.7
NFATC1
nuclear factor of activated T cells 1
chr12_-_46372763 0.24 ENST00000256689.10
SLC38A2
solute carrier family 38 member 2
chr14_+_37197921 0.21 ENST00000684589.1
ENST00000327441.11
MIPOL1
mirror-image polydactyly 1
chrX_+_74421450 0.21 ENST00000587091.6
SLC16A2
solute carrier family 16 member 2
chr14_+_105526568 0.19 ENST00000392519.7
TMEM121
transmembrane protein 121
chr11_-_73598183 0.15 ENST00000064778.8
FAM168A
family with sequence similarity 168 member A
chr7_-_42237187 0.15 ENST00000395925.8
GLI3
GLI family zinc finger 3
chr12_+_50504970 0.14 ENST00000301180.10
DIP2B
disco interacting protein 2 homolog B
chr15_-_44194407 0.14 ENST00000484674.5
FRMD5
FERM domain containing 5
chr17_-_49764123 0.12 ENST00000240364.7
ENST00000506156.1
FAM117A
family with sequence similarity 117 member A
chr11_-_130314686 0.12 ENST00000525842.5
ZBTB44
zinc finger and BTB domain containing 44
chr1_-_211579064 0.12 ENST00000367001.5
SLC30A1
solute carrier family 30 member 1
chr12_-_64752871 0.12 ENST00000418919.6
GNS
glucosamine (N-acetyl)-6-sulfatase
chr10_+_68560317 0.12 ENST00000373644.5
TET1
tet methylcytosine dioxygenase 1
chr11_+_87037820 0.11 ENST00000340353.11
TMEM135
transmembrane protein 135
chr6_+_17281341 0.10 ENST00000379052.10
RBM24
RNA binding motif protein 24
chr13_-_74133892 0.09 ENST00000377669.7
KLF12
Kruppel like factor 12
chr17_+_67825664 0.09 ENST00000321892.8
BPTF
bromodomain PHD finger transcription factor
chr15_-_49046427 0.08 ENST00000261847.7
ENST00000559471.6
ENST00000380927.6
ENST00000559424.1
SECISBP2L
SECIS binding protein 2 like
chr16_-_23510389 0.08 ENST00000562117.1
ENST00000567468.5
ENST00000562944.5
ENST00000309859.8
GGA2
golgi associated, gamma adaptin ear containing, ARF binding protein 2
chrX_+_10015226 0.08 ENST00000380861.9
WWC3
WWC family member 3
chr2_+_180980566 0.08 ENST00000410062.9
UBE2E3
ubiquitin conjugating enzyme E2 E3
chr13_+_40789548 0.07 ENST00000338625.9
SLC25A15
solute carrier family 25 member 15
chr9_+_128068172 0.07 ENST00000373068.6
ENST00000373069.10
SLC25A25
solute carrier family 25 member 25
chr20_+_2692736 0.07 ENST00000380648.9
ENST00000497450.5
EBF4
EBF family member 4
chr6_+_107490103 0.07 ENST00000317357.10
SOBP
sine oculis binding protein homolog
chr9_+_87497675 0.07 ENST00000472284.5
ENST00000469640.6
DAPK1
death associated protein kinase 1
chr17_+_30378903 0.06 ENST00000225719.9
CPD
carboxypeptidase D
chr1_-_179229671 0.06 ENST00000502732.6
ENST00000392043.4
ABL2
ABL proto-oncogene 2, non-receptor tyrosine kinase
chr3_+_97764728 0.06 ENST00000463745.6
ARL6
ADP ribosylation factor like GTPase 6
chr12_+_59689337 0.06 ENST00000261187.8
SLC16A7
solute carrier family 16 member 7
chr15_+_39581068 0.05 ENST00000397591.2
ENST00000260356.6
THBS1
thrombospondin 1
chr11_+_114059702 0.05 ENST00000335953.9
ENST00000684612.1
ENST00000682810.1
ENST00000544220.1
ZBTB16
zinc finger and BTB domain containing 16
chr6_-_52577012 0.05 ENST00000182527.4
TRAM2
translocation associated membrane protein 2
chr11_+_57753243 0.05 ENST00000524630.5
ENST00000529919.5
ENST00000533189.1
CTNND1
catenin delta 1
chr9_-_20622479 0.05 ENST00000380338.9
MLLT3
MLLT3 super elongation complex subunit
chr6_-_131951364 0.05 ENST00000367976.4
CCN2
cellular communication network factor 2
chr1_-_205321737 0.05 ENST00000367157.6
NUAK2
NUAK family kinase 2
chr16_+_70114306 0.05 ENST00000288050.9
ENST00000398122.7
ENST00000568530.5
PDPR
pyruvate dehydrogenase phosphatase regulatory subunit
chr1_-_231422261 0.05 ENST00000366641.4
EGLN1
egl-9 family hypoxia inducible factor 1
chr9_+_127612257 0.05 ENST00000637173.2
ENST00000630492.2
ENST00000627871.2
ENST00000373302.8
ENST00000373299.5
ENST00000650920.1
ENST00000476182.3
STXBP1
syntaxin binding protein 1
chr3_+_9933805 0.05 ENST00000684493.1
ENST00000673935.2
ENST00000684181.1
ENST00000683189.1
ENST00000383811.8
ENST00000452070.6
ENST00000682642.1
ENST00000684659.1
ENST00000491527.2
ENST00000326434.9
ENST00000682783.1
ENST00000683835.1
ENST00000682570.1
CRELD1
cysteine rich with EGF like domains 1
chr1_+_87328860 0.04 ENST00000370544.10
LMO4
LIM domain only 4
chr17_-_63842663 0.04 ENST00000613943.4
ENST00000448276.7
SMARCD2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
chr17_+_59707636 0.04 ENST00000262291.9
ENST00000587945.1
ENST00000589823.6
ENST00000592106.5
ENST00000591315.5
VMP1
vacuole membrane protein 1
chr2_-_208025494 0.04 ENST00000457206.1
ENST00000427836.8
PLEKHM3
pleckstrin homology domain containing M3
chr10_-_125160499 0.04 ENST00000494626.6
ENST00000337195.9
CTBP2
C-terminal binding protein 2
chr17_+_62627628 0.04 ENST00000303375.10
MRC2
mannose receptor C type 2
chr19_-_50637939 0.04 ENST00000338916.8
SYT3
synaptotagmin 3
chrX_-_110318062 0.04 ENST00000372059.6
ENST00000262844.10
AMMECR1
AMMECR nuclear protein 1
chr11_-_67469210 0.04 ENST00000393877.3
ENST00000308022.7
TMEM134
transmembrane protein 134
chr15_+_76995118 0.04 ENST00000558012.6
ENST00000379595.7
PSTPIP1
proline-serine-threonine phosphatase interacting protein 1
chr12_-_57050102 0.04 ENST00000300119.8
MYO1A
myosin IA
chr5_-_55712280 0.04 ENST00000506624.5
ENST00000513275.5
ENST00000513993.5
ENST00000396865.7
ENST00000503891.5
ENST00000507109.5
SLC38A9
solute carrier family 38 member 9
chr19_-_14518383 0.03 ENST00000254322.3
ENST00000595139.2
DNAJB1
DnaJ heat shock protein family (Hsp40) member B1
chr1_-_186680411 0.03 ENST00000367468.10
PTGS2
prostaglandin-endoperoxide synthase 2
chr7_+_143288215 0.03 ENST00000619992.4
ENST00000310447.10
CASP2
caspase 2
chr9_-_35650902 0.03 ENST00000259608.8
ENST00000618781.1
SIT1
signaling threshold regulating transmembrane adaptor 1
chrX_-_107716401 0.03 ENST00000486554.1
ENST00000372390.8
TSC22D3
TSC22 domain family member 3
chr5_+_140564811 0.03 ENST00000612662.2
ENST00000323146.8
ENST00000514199.1
SLC35A4
solute carrier family 35 member A4
chr17_+_40121955 0.03 ENST00000398532.9
MSL1
MSL complex subunit 1
chr8_-_63086031 0.03 ENST00000260116.5
TTPA
alpha tocopherol transfer protein
chr18_-_56638427 0.03 ENST00000586262.5
ENST00000217515.11
TXNL1
thioredoxin like 1
chr12_-_52191981 0.03 ENST00000313234.9
KRT80
keratin 80
chr7_+_2631978 0.03 ENST00000258796.12
TTYH3
tweety family member 3
chr9_-_68540879 0.03 ENST00000377311.4
TMEM252
transmembrane protein 252
chr17_-_30291930 0.03 ENST00000261714.11
BLMH
bleomycin hydrolase
chr2_+_119759875 0.03 ENST00000263708.7
PTPN4
protein tyrosine phosphatase non-receptor type 4
chr6_+_32968557 0.03 ENST00000374825.9
BRD2
bromodomain containing 2
chr19_-_39833615 0.02 ENST00000593685.5
ENST00000600611.5
DYRK1B
dual specificity tyrosine phosphorylation regulated kinase 1B
chr20_-_41300066 0.02 ENST00000436099.6
ENST00000309060.7
ENST00000373261.5
ENST00000436440.6
ENST00000560364.5
ENST00000560361.5
ZHX3
zinc fingers and homeoboxes 3
chr1_+_61742418 0.02 ENST00000316485.11
ENST00000371158.6
ENST00000642238.2
ENST00000613764.4
PATJ
PATJ crumbs cell polarity complex component
chr12_-_54280087 0.02 ENST00000209875.9
CBX5
chromobox 5
chr10_+_63521365 0.02 ENST00000373758.5
REEP3
receptor accessory protein 3
chr17_-_48545077 0.02 ENST00000330070.6
HOXB2
homeobox B2
chr2_+_86720282 0.02 ENST00000283632.5
RMND5A
required for meiotic nuclear division 5 homolog A
chr12_-_49060742 0.02 ENST00000301067.12
ENST00000683543.1
KMT2D
lysine methyltransferase 2D
chr11_+_13668653 0.02 ENST00000354817.8
FAR1
fatty acyl-CoA reductase 1
chr6_+_43298254 0.02 ENST00000372585.10
ENST00000449231.5
ENST00000372589.7
SLC22A7
solute carrier family 22 member 7
chr2_-_85612023 0.02 ENST00000409734.3
ENST00000306336.6
C2orf68
chromosome 2 open reading frame 68
chr5_-_154938181 0.02 ENST00000285873.8
GEMIN5
gem nuclear organelle associated protein 5
chr9_-_120714457 0.02 ENST00000373930.4
MEGF9
multiple EGF like domains 9
chr6_+_159969070 0.02 ENST00000356956.6
IGF2R
insulin like growth factor 2 receptor
chr6_-_24719146 0.02 ENST00000378119.9
C6orf62
chromosome 6 open reading frame 62
chr5_+_141923813 0.02 ENST00000194118.8
ENST00000432126.7
DELE1
DAP3 binding cell death enhancer 1
chr2_-_163735989 0.02 ENST00000333129.4
ENST00000409634.5
FIGN
fidgetin, microtubule severing factor
chr14_-_31207758 0.02 ENST00000399332.6
ENST00000553700.5
HECTD1
HECT domain E3 ubiquitin protein ligase 1
chr12_+_10212867 0.02 ENST00000545047.5
ENST00000266458.10
ENST00000629504.1
ENST00000543602.5
ENST00000545887.1
GABARAPL1
GABA type A receptor associated protein like 1
chr20_-_49482645 0.02 ENST00000371741.6
KCNB1
potassium voltage-gated channel subfamily B member 1
chr2_-_179264757 0.02 ENST00000428443.8
SESTD1
SEC14 and spectrin domain containing 1
chr13_+_73058993 0.02 ENST00000377687.6
KLF5
Kruppel like factor 5
chr1_+_35883189 0.01 ENST00000674304.1
ENST00000373204.6
ENST00000674426.1
AGO1
argonaute RISC component 1
chr15_+_31326807 0.01 ENST00000307145.4
KLF13
Kruppel like factor 13
chr2_+_219178266 0.01 ENST00000430297.7
RETREG2
reticulophagy regulator family member 2
chr6_+_32741382 0.01 ENST00000374940.4
HLA-DQA2
major histocompatibility complex, class II, DQ alpha 2
chr1_+_89524819 0.01 ENST00000439853.6
ENST00000330947.7
ENST00000449440.5
ENST00000640258.1
LRRC8B
leucine rich repeat containing 8 VRAC subunit B
chrX_+_129982610 0.01 ENST00000218147.11
ENST00000540052.6
BCORL1
BCL6 corepressor like 1
chr4_+_44678412 0.01 ENST00000281543.6
GUF1
GTP binding elongation factor GUF1
chr17_+_58083407 0.01 ENST00000579991.3
DYNLL2
dynein light chain LC8-type 2
chr14_+_90397019 0.01 ENST00000447653.8
ENST00000356978.9
ENST00000626705.2
CALM1
calmodulin 1
chr9_-_71911183 0.01 ENST00000333421.7
ABHD17B
abhydrolase domain containing 17B, depalmitoylase
chr21_-_44818043 0.01 ENST00000397898.7
ENST00000332859.11
SUMO3
small ubiquitin like modifier 3
chr3_-_115071333 0.01 ENST00000462705.5
ZBTB20
zinc finger and BTB domain containing 20
chr3_+_9793074 0.01 ENST00000397261.8
ENST00000485273.1
ENST00000433034.1
ENST00000397256.5
ARPC4
ARPC4-TTLL3
actin related protein 2/3 complex subunit 4
ARPC4-TTLL3 readthrough
chr22_+_39994926 0.01 ENST00000333407.11
FAM83F
family with sequence similarity 83 member F
chr19_-_13506223 0.01 ENST00000635727.1
ENST00000636012.1
ENST00000637276.1
ENST00000636549.1
ENST00000573710.7
ENST00000637927.1
CACNA1A
calcium voltage-gated channel subunit alpha1 A
chr19_-_38315919 0.01 ENST00000591755.5
ENST00000337679.12
ENST00000339413.11
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein
chr19_-_45973863 0.01 ENST00000263257.6
NOVA2
NOVA alternative splicing regulator 2
chr10_+_75111595 0.01 ENST00000671800.1
ENST00000542569.6
ENST00000372687.4
SAMD8
sterile alpha motif domain containing 8
chr5_-_160419059 0.01 ENST00000297151.9
ENST00000519349.5
ENST00000520664.1
SLU7
SLU7 homolog, splicing factor
chrX_+_134373297 0.01 ENST00000332070.7
ENST00000370803.8
ENST00000625464.2
ENST00000370799.5
PHF6
PHD finger protein 6
chr1_-_114716729 0.01 ENST00000369535.5
NRAS
NRAS proto-oncogene, GTPase
chr3_-_52154382 0.01 ENST00000474012.1
ENST00000296484.7
POC1A
POC1 centriolar protein A
chr19_+_1905366 0.01 ENST00000414057.6
ENST00000316097.13
ENST00000409472.5
ENST00000329478.4
SCAMP4
ADAT3
secretory carrier membrane protein 4
adenosine deaminase tRNA specific 3
chr20_-_51542658 0.01 ENST00000396009.7
ENST00000371564.8
ENST00000610033.5
NFATC2
nuclear factor of activated T cells 2
chr5_-_38595396 0.01 ENST00000263409.8
LIFR
LIF receptor subunit alpha
chr2_-_69643703 0.01 ENST00000406297.7
ENST00000409085.9
AAK1
AP2 associated kinase 1
chrX_+_78104229 0.01 ENST00000373316.5
PGK1
phosphoglycerate kinase 1
chr12_-_31326111 0.01 ENST00000539409.5
SINHCAF
SIN3-HDAC complex associated factor
chr2_-_72825982 0.01 ENST00000634650.1
ENST00000272427.11
ENST00000410104.1
EXOC6B
exocyst complex component 6B
chr3_+_184155310 0.01 ENST00000313143.9
DVL3
dishevelled segment polarity protein 3
chr1_-_39672080 0.01 ENST00000235628.2
NT5C1A
5'-nucleotidase, cytosolic IA
chr1_+_2391775 0.00 ENST00000378513.7
ENST00000378518.5
ENST00000605895.6
ENST00000306256.13
ENST00000378512.5
RER1
retention in endoplasmic reticulum sorting receptor 1
chr10_+_103493931 0.00 ENST00000369780.8
NEURL1
neuralized E3 ubiquitin protein ligase 1
chr18_-_63319987 0.00 ENST00000398117.1
BCL2
BCL2 apoptosis regulator
chr3_-_125375249 0.00 ENST00000484491.5
ENST00000492394.5
ENST00000471196.1
ENST00000468369.5
ENST00000485866.5
ENST00000360647.9
ZNF148
zinc finger protein 148
chr5_+_146203593 0.00 ENST00000265271.7
RBM27
RNA binding motif protein 27
chr19_-_46625037 0.00 ENST00000596260.1
ENST00000594275.1
ENST00000597185.1
ENST00000598865.5
ENST00000291294.7
PTGIR
prostaglandin I2 receptor
chr2_+_96816236 0.00 ENST00000377060.7
ENST00000305510.4
CNNM3
cyclin and CBS domain divalent metal cation transport mediator 3
chr12_-_122526929 0.00 ENST00000331738.12
ENST00000528279.1
ENST00000344591.8
ENST00000526560.6
RSRC2
arginine and serine rich coiled-coil 2
chr11_+_76783349 0.00 ENST00000333090.5
TSKU
tsukushi, small leucine rich proteoglycan
chr12_+_56080155 0.00 ENST00000267101.8
ERBB3
erb-b2 receptor tyrosine kinase 3
chr5_+_55160161 0.00 ENST00000296734.6
ENST00000515370.1
ENST00000503787.6
GPX8
glutathione peroxidase 8 (putative)
chr20_-_41618362 0.00 ENST00000373222.3
ENST00000373233.8
CHD6
chromodomain helicase DNA binding protein 6
chr18_-_61892997 0.00 ENST00000312828.4
RNF152
ring finger protein 152
chr4_+_98995709 0.00 ENST00000296411.11
ENST00000625963.1
METAP1
methionyl aminopeptidase 1
chr5_+_142108753 0.00 ENST00000253814.6
NDFIP1
Nedd4 family interacting protein 1
chr15_+_68578970 0.00 ENST00000261861.10
CORO2B
coronin 2B
chr18_-_31943026 0.00 ENST00000582539.5
ENST00000582513.5
ENST00000283351.10
TRAPPC8
trafficking protein particle complex 8
chr17_-_30824665 0.00 ENST00000324238.7
CRLF3
cytokine receptor like factor 3
chr10_-_87863533 0.00 ENST00000445946.5
KLLN
killin, p53 regulated DNA replication inhibitor
chr12_-_42144823 0.00 ENST00000398675.8
GXYLT1
glucoside xylosyltransferase 1
chr5_+_154712824 0.00 ENST00000336314.9
LARP1
La ribonucleoprotein 1, translational regulator

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 GO:1901491 negative regulation of lymphangiogenesis(GO:1901491)
0.1 0.3 GO:0072720 response to dithiothreitol(GO:0072720)
0.1 0.2 GO:1905053 regulation of base-excision repair(GO:1905051) positive regulation of base-excision repair(GO:1905053)
0.0 0.1 GO:0022018 subpallium cell proliferation in forebrain(GO:0022012) lateral ganglionic eminence cell proliferation(GO:0022018) lambdoid suture morphogenesis(GO:0060366) sagittal suture morphogenesis(GO:0060367) anterior semicircular canal development(GO:0060873) lateral semicircular canal development(GO:0060875)
0.0 0.1 GO:0090310 negative regulation of methylation-dependent chromatin silencing(GO:0090310)
0.0 0.6 GO:0001574 ganglioside biosynthetic process(GO:0001574)
0.0 0.2 GO:0032328 alanine transport(GO:0032328)
0.0 0.3 GO:0070257 positive regulation of mucus secretion(GO:0070257)
0.0 0.3 GO:0060352 cell adhesion molecule production(GO:0060352)
0.0 0.1 GO:0061687 detoxification of inorganic compound(GO:0061687) stress response to metal ion(GO:0097501)
0.0 0.1 GO:0002581 negative regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II(GO:0002581) regulation of cGMP-mediated signaling(GO:0010752)
0.0 0.2 GO:0070327 thyroid hormone transport(GO:0070327)
0.0 0.4 GO:0003334 keratinocyte development(GO:0003334)
0.0 0.1 GO:1903352 L-ornithine transmembrane transport(GO:1903352)
0.0 0.1 GO:0046909 intermembrane transport(GO:0046909) protein transport from ciliary membrane to plasma membrane(GO:1903445)
0.0 0.0 GO:1903294 regulation of glutamate secretion, neurotransmission(GO:1903294) positive regulation of glutamate secretion, neurotransmission(GO:1903296)
0.0 0.0 GO:0090271 positive regulation of fibroblast growth factor production(GO:0090271)
0.0 0.1 GO:0045048 protein insertion into ER membrane(GO:0045048)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 0.3 GO:0003829 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity(GO:0003829)
0.1 0.6 GO:0003828 alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity(GO:0003828)
0.1 0.3 GO:0035276 ethanol binding(GO:0035276)
0.0 0.3 GO:0001225 RNA polymerase II transcription coactivator binding(GO:0001225)
0.0 0.2 GO:0015349 thyroid hormone transmembrane transporter activity(GO:0015349)
0.0 0.1 GO:0008449 N-acetylglucosamine-6-sulfatase activity(GO:0008449)
0.0 0.1 GO:0070579 methylcytosine dioxygenase activity(GO:0070579)
0.0 0.1 GO:0005477 pyruvate secondary active transmembrane transporter activity(GO:0005477)
0.0 0.1 GO:0070052 collagen V binding(GO:0070052)
0.0 0.3 GO:0003688 DNA replication origin binding(GO:0003688)
0.0 0.1 GO:0032184 SUMO polymer binding(GO:0032184)
0.0 0.0 GO:0004741 [pyruvate dehydrogenase (lipoamide)] phosphatase activity(GO:0004741)
0.0 0.1 GO:0035368 selenocysteine insertion sequence binding(GO:0035368)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.3 PID LPA4 PATHWAY LPA4-mediated signaling events