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Inflammatory response time course, HUVEC (Wada, 2009)

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Results for HDX

Z-value: 0.39

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Transcription factors associated with HDX

Gene Symbol Gene ID Gene Info
ENSG00000165259.14 HDX

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
HDXhg38_v1_chrX_-_84502442_84502501-0.582.4e-03Click!

Activity profile of HDX motif

Sorted Z-values of HDX motif

Network of associatons between targets according to the STRING database.

First level regulatory network of HDX

PNG image of the network

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Promoter Score Transcript Gene Gene Info
chr9_+_6215786 2.87 ENST00000417746.6
ENST00000682010.1
interleukin 33
chr1_+_84164370 1.96 ENST00000446538.5
ENST00000610703.4
ENST00000370682.7
ENST00000394838.6
ENST00000432111.5
protein kinase cAMP-activated catalytic subunit beta
chr7_+_80135694 1.41 ENST00000457358.7
G protein subunit alpha i1
chr1_+_47023659 1.26 ENST00000371901.4
cytochrome P450 family 4 subfamily X member 1
chr2_-_191020960 1.16 ENST00000432058.1
signal transducer and activator of transcription 1
chr3_-_165837412 0.68 ENST00000479451.5
ENST00000488954.1
ENST00000264381.8
butyrylcholinesterase
chr1_+_84164684 0.55 ENST00000370680.5
protein kinase cAMP-activated catalytic subunit beta
chr19_-_57974527 0.42 ENST00000314391.3
chromosome 19 open reading frame 18
chr3_+_107523026 0.40 ENST00000416476.6
BBX high mobility group box domain containing
chr5_-_135954962 0.35 ENST00000522943.5
ENST00000514447.2
ENST00000274507.6
leukocyte cell derived chemotaxin 2
chr5_-_35230332 0.33 ENST00000504500.5
prolactin receptor
chr11_+_9664061 0.28 ENST00000447399.6
ENST00000318950.11
switching B cell complex subunit SWAP70
chr2_+_169069537 0.28 ENST00000428522.5
ENST00000450153.1
ENST00000674881.1
ENST00000421653.5
dehydrogenase/reductase 9
chr3_+_107522936 0.23 ENST00000415149.6
ENST00000402543.5
ENST00000325805.13
ENST00000427402.5
BBX high mobility group box domain containing
chr22_+_40044802 0.23 ENST00000441751.5
ENST00000301923.13
trinucleotide repeat containing adaptor 6B
chr5_+_140786291 0.22 ENST00000394633.7
protocadherin alpha 1
chr19_+_36111151 0.22 ENST00000633214.1
ENST00000585332.3
ovo like zinc finger 3
chr3_+_54123452 0.18 ENST00000620722.4
ENST00000490478.5
calcium voltage-gated channel auxiliary subunit alpha2delta 3
chr1_-_48400826 0.17 ENST00000371841.1
spermatogenesis associated 6
chr7_+_142800957 0.17 ENST00000466254.1
T cell receptor beta constant 2
chr6_+_32969345 0.16 ENST00000678250.1
bromodomain containing 2
chr1_-_110519175 0.15 ENST00000369771.4
potassium voltage-gated channel subfamily A member 10
chr2_+_127646145 0.12 ENST00000486700.2
ENST00000272644.7
G protein-coupled receptor 17
chr20_-_37158904 0.10 ENST00000417458.5
maestro heat like repeat family member 8
chr1_-_169711603 0.08 ENST00000236147.6
ENST00000650983.1
selectin L
chr2_+_127645864 0.07 ENST00000544369.5
G protein-coupled receptor 17
chr19_-_41428730 0.07 ENST00000321702.2
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8
chr1_-_205422050 0.05 ENST00000367153.9
LEM domain containing 1
chrX_+_55623400 0.05 ENST00000339140.5
forkhead box R2
chr12_-_118359639 0.05 ENST00000541786.5
ENST00000419821.6
ENST00000541878.5
TAO kinase 3
chr1_+_62597510 0.04 ENST00000371129.4
angiopoietin like 3
chr12_+_56763316 0.03 ENST00000322165.1
hydroxysteroid 17-beta dehydrogenase 6
chr7_+_129368123 0.02 ENST00000460109.5
ENST00000474594.5
adenosylhomocysteinase like 2
chr2_+_112977998 0.02 ENST00000259205.5
ENST00000376489.6
interleukin 36 gamma
chr8_+_109086585 0.00 ENST00000518632.2
thyrotropin releasing hormone receptor

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.5 2.9 GO:0002282 microglial cell activation involved in immune response(GO:0002282) macrophage proliferation(GO:0061517) microglial cell proliferation(GO:0061518)
0.4 1.2 GO:0072308 negative regulation by virus of viral protein levels in host cell(GO:0046725) negative regulation of metanephric nephron tubule epithelial cell differentiation(GO:0072308)
0.4 2.5 GO:0097338 response to clozapine(GO:0097338)
0.2 0.7 GO:0014016 neuroblast differentiation(GO:0014016)
0.1 1.4 GO:1904321 response to forskolin(GO:1904321) cellular response to forskolin(GO:1904322)
0.1 0.3 GO:1902309 negative regulation of peptidyl-serine dephosphorylation(GO:1902309)
0.1 0.3 GO:0038161 prolactin signaling pathway(GO:0038161)
0.0 0.3 GO:0042904 9-cis-retinoic acid biosynthetic process(GO:0042904) 9-cis-retinoic acid metabolic process(GO:0042905)
0.0 0.2 GO:0002862 negative regulation of inflammatory response to antigenic stimulus(GO:0002862)
0.0 0.2 GO:0035278 miRNA mediated inhibition of translation(GO:0035278) negative regulation of translation, ncRNA-mediated(GO:0040033) regulation of translation, ncRNA-mediated(GO:0045974)
0.0 0.1 GO:0030311 poly-N-acetyllactosamine biosynthetic process(GO:0030311)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 2.5 GO:0005952 cAMP-dependent protein kinase complex(GO:0005952)
0.1 0.2 GO:0097224 sperm connecting piece(GO:0097224)
0.0 0.7 GO:0005641 nuclear envelope lumen(GO:0005641)
0.0 1.4 GO:0099738 cell cortex region(GO:0099738)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.7 GO:0003990 acetylcholinesterase activity(GO:0003990)
0.2 2.5 GO:0004691 cAMP-dependent protein kinase activity(GO:0004691)
0.1 1.4 GO:0031821 G-protein coupled serotonin receptor binding(GO:0031821)
0.1 0.3 GO:0004925 prolactin receptor activity(GO:0004925)
0.0 1.3 GO:0070330 aromatase activity(GO:0070330)
0.0 0.3 GO:0047035 testosterone dehydrogenase (NAD+) activity(GO:0047035)
0.0 1.2 GO:0005164 tumor necrosis factor receptor binding(GO:0005164)
0.0 0.1 GO:0016262 protein N-acetylglucosaminyltransferase activity(GO:0016262)
0.0 0.2 GO:0032027 myosin light chain binding(GO:0032027)
0.0 0.1 GO:0043208 glycosphingolipid binding(GO:0043208)
0.0 0.2 GO:0043855 intracellular cyclic nucleotide activated cation channel activity(GO:0005221) cyclic nucleotide-gated ion channel activity(GO:0043855)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.2 ST TYPE I INTERFERON PATHWAY Type I Interferon (alpha/beta IFN) Pathway
0.0 1.4 PID S1P S1P4 PATHWAY S1P4 pathway
0.0 2.5 PID IL3 PATHWAY IL3-mediated signaling events

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.1 1.4 REACTOME ADENYLATE CYCLASE INHIBITORY PATHWAY Genes involved in Adenylate cyclase inhibitory pathway
0.1 2.5 REACTOME PKA MEDIATED PHOSPHORYLATION OF CREB Genes involved in PKA-mediated phosphorylation of CREB
0.1 1.2 REACTOME IL 6 SIGNALING Genes involved in Interleukin-6 signaling
0.0 0.7 REACTOME SYNTHESIS SECRETION AND DEACYLATION OF GHRELIN Genes involved in Synthesis, Secretion, and Deacylation of Ghrelin
0.0 0.3 REACTOME PROLACTIN RECEPTOR SIGNALING Genes involved in Prolactin receptor signaling