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Inflammatory response time course, HUVEC (Wada, 2009)

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Results for IRF3

Z-value: 3.29

Motif logo

Transcription factors associated with IRF3

Gene Symbol Gene ID Gene Info
ENSG00000126456.16 IRF3

Activity-expression correlation:

GenePromoterPearson corr. coef.P-valuePlot
IRF3hg38_v1_chr19_-_49665705_49665806-0.501.1e-02Click!

Activity profile of IRF3 motif

Sorted Z-values of IRF3 motif

Network of associatons between targets according to the STRING database.

First level regulatory network of IRF3

PNG image of the network

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Promoter Score Transcript Gene Gene Info
chr10_+_89332484 31.92 ENST00000371811.4
ENST00000680037.1
ENST00000679583.1
ENST00000679897.1
interferon induced protein with tetratricopeptide repeats 3
chr10_+_89327989 30.91 ENST00000679923.1
ENST00000680085.1
ENST00000371818.9
ENST00000680779.1
interferon induced protein with tetratricopeptide repeats 3
chr10_+_89327977 30.03 ENST00000681277.1
interferon induced protein with tetratricopeptide repeats 3
chr21_+_41420515 29.41 ENST00000398600.6
ENST00000679626.1
MX dynamin like GTPase 1
chr2_-_162318475 23.58 ENST00000648433.1
interferon induced with helicase C domain 1
chr6_+_32854179 21.69 ENST00000374859.3
proteasome 20S subunit beta 9
chr17_-_42112674 21.21 ENST00000251642.8
ENST00000591220.5
DExH-box helicase 58
chr12_+_112978386 20.80 ENST00000342315.8
2'-5'-oligoadenylate synthetase 2
chr15_+_88639009 20.48 ENST00000306072.10
interferon stimulated exonuclease gene 20
chr3_+_122680802 19.89 ENST00000474629.7
poly(ADP-ribose) polymerase family member 14
chr10_-_48493641 17.87 ENST00000417247.6
Rho GTPase activating protein 22
chr6_-_32853618 17.74 ENST00000354258.5
transporter 1, ATP binding cassette subfamily B member
chr6_-_32853813 17.53 ENST00000643049.2
transporter 1, ATP binding cassette subfamily B member
chr12_+_112938523 17.41 ENST00000679483.1
ENST00000679493.1
2'-5'-oligoadenylate synthetase 3
chr12_+_112938284 17.07 ENST00000681346.1
2'-5'-oligoadenylate synthetase 3
chr3_-_122564232 16.72 ENST00000471785.5
ENST00000466126.1
poly(ADP-ribose) polymerase family member 9
chr17_-_35880350 16.58 ENST00000605140.6
ENST00000651122.1
ENST00000603197.6
C-C motif chemokine ligand 5
chr3_-_122564577 16.40 ENST00000477522.6
ENST00000360356.6
poly(ADP-ribose) polymerase family member 9
chr2_-_162318129 16.31 ENST00000679938.1
interferon induced with helicase C domain 1
chr19_+_18173804 16.27 ENST00000407280.4
IFI30 lysosomal thiol reductase
chr12_+_112978562 16.23 ENST00000680122.1
2'-5'-oligoadenylate synthetase 2
chr11_-_60952559 14.48 ENST00000538739.2
solute carrier family 15 member 3
chr11_-_60952134 14.14 ENST00000679573.1
ENST00000681882.1
ENST00000681951.1
ENST00000227880.8
solute carrier family 15 member 3
chr3_+_122564327 13.91 ENST00000296161.9
ENST00000383661.3
deltex E3 ubiquitin ligase 3L
chr12_+_112978504 13.38 ENST00000392583.7
2'-5'-oligoadenylate synthetase 2
chr11_-_60952067 12.99 ENST00000681275.1
solute carrier family 15 member 3
chr11_-_4393650 12.93 ENST00000254436.8
tripartite motif containing 21
chr17_+_6756035 12.79 ENST00000361842.8
ENST00000574907.5
XIAP associated factor 1
chr2_+_126656128 12.21 ENST00000259254.9
ENST00000409836.3
ENST00000356887.12
glycophorin C (Gerbich blood group)
chr1_+_78649818 12.18 ENST00000370747.9
ENST00000438486.1
interferon induced protein 44
chr7_-_93148345 11.69 ENST00000437805.5
ENST00000446959.5
ENST00000439952.5
ENST00000414791.5
ENST00000446033.1
ENST00000411955.5
ENST00000318238.9
sterile alpha motif domain containing 9 like
chr6_-_32838727 11.44 ENST00000652259.1
ENST00000374897.4
ENST00000620123.4
ENST00000452392.2
transporter 2, ATP binding cassette subfamily B member
novel protein, TAP2-HLA-DOB readthrough
chr6_+_26440472 11.23 ENST00000494393.5
ENST00000482451.5
ENST00000471353.5
ENST00000361232.7
ENST00000487627.5
ENST00000496719.1
ENST00000244519.7
ENST00000490254.5
ENST00000487272.1
butyrophilin subfamily 3 member A3
chr12_+_112938422 10.91 ENST00000680044.1
ENST00000680966.1
ENST00000548514.2
ENST00000681497.1
ENST00000551007.1
ENST00000228928.12
ENST00000680438.1
ENST00000681147.1
ENST00000679354.1
ENST00000681085.1
ENST00000680161.1
2'-5'-oligoadenylate synthetase 3
chr1_-_7940825 10.36 ENST00000377507.8
TNF receptor superfamily member 9
chr22_+_35648438 10.19 ENST00000409652.5
apolipoprotein L6
chr2_-_6865901 10.18 ENST00000256722.10
cytidine/uridine monophosphate kinase 2
chr3_-_122564253 10.12 ENST00000492382.5
ENST00000682323.1
ENST00000462315.5
poly(ADP-ribose) polymerase family member 9
chr22_+_36253071 9.96 ENST00000422706.5
ENST00000426053.5
ENST00000319136.8
apolipoprotein L1
chr22_+_36253124 9.12 ENST00000438034.5
ENST00000427990.5
ENST00000397278.8
ENST00000397279.8
ENST00000433768.5
apolipoprotein L1
chr11_-_57567617 9.07 ENST00000287156.9
ubiquitin conjugating enzyme E2 L6
chr22_+_18150162 8.99 ENST00000215794.8
ubiquitin specific peptidase 18
chr1_-_89198868 8.52 ENST00000355754.7
guanylate binding protein 4
chr17_+_6755834 8.24 ENST00000346752.8
XIAP associated factor 1
chr6_+_26402237 7.91 ENST00000476549.6
ENST00000450085.6
ENST00000425234.6
ENST00000427334.5
ENST00000506698.1
ENST00000289361.11
butyrophilin subfamily 3 member A1
chr7_+_101085464 7.89 ENST00000306085.11
ENST00000412507.1
tripartite motif containing 56
chr19_+_10086305 7.12 ENST00000253110.16
ENST00000591813.5
shiftless antiviral inhibitor of ribosomal frameshifting
chr17_+_42289213 7.03 ENST00000677301.1
signal transducer and activator of transcription 5A
chr7_-_140062841 6.83 ENST00000263549.8
poly(ADP-ribose) polymerase family member 12
chr2_-_219387784 6.75 ENST00000520694.6
aspartyl aminopeptidase
chr11_-_615570 6.74 ENST00000649187.1
ENST00000647801.1
ENST00000397566.5
ENST00000397570.5
interferon regulatory factor 7
chr7_-_93117956 6.61 ENST00000446617.1
ENST00000379958.3
ENST00000620985.4
sterile alpha motif domain containing 9
chr19_-_47232649 6.41 ENST00000449228.5
ENST00000300880.11
ENST00000341983.8
BCL2 binding component 3
chr2_-_230219902 6.38 ENST00000409815.6
SP110 nuclear body protein
chr6_-_36387736 5.95 ENST00000373737.8
ENST00000373738.4
ENST00000538992.3
ENST00000615781.4
ENST00000620358.4
ETS variant transcription factor 7
chr6_-_36387654 5.90 ENST00000340181.9
ETS variant transcription factor 7
chr2_-_231125032 5.76 ENST00000258400.4
5-hydroxytryptamine receptor 2B
chr7_-_139109702 5.61 ENST00000471652.1
ENST00000242351.10
zinc finger CCCH-type containing, antiviral 1
chr4_-_168318770 5.49 ENST00000680771.1
ENST00000514995.2
DExD/H-box helicase 60
chr2_-_219387881 5.42 ENST00000322176.11
ENST00000273075.9
aspartyl aminopeptidase
chr11_-_615921 5.32 ENST00000348655.11
ENST00000525445.6
ENST00000330243.9
interferon regulatory factor 7
chr20_-_49278034 5.28 ENST00000371744.5
ENST00000396105.6
ENST00000371752.5
zinc finger NFX1-type containing 1
chr2_-_230219944 5.22 ENST00000455674.2
ENST00000392048.7
ENST00000258381.11
ENST00000358662.9
ENST00000258382.10
SP110 nuclear body protein
chr22_+_39077264 5.05 ENST00000407997.4
apolipoprotein B mRNA editing enzyme catalytic subunit 3G
chr10_+_113679523 4.93 ENST00000345633.8
ENST00000614447.4
ENST00000369321.6
caspase 7
chr4_-_168318743 4.91 ENST00000393743.8
DExD/H-box helicase 60
chr1_+_1013485 4.88 ENST00000649529.1
ISG15 ubiquitin like modifier
chr2_+_112095189 4.83 ENST00000649734.1
transmembrane protein 87B
chr14_-_24146596 4.82 ENST00000560410.5
ENST00000216802.10
ENST00000615264.4
ENST00000630027.1
proteasome activator subunit 2
chr17_-_65056659 4.69 ENST00000439174.7
G protein subunit alpha 13
chr14_-_24146314 4.68 ENST00000559056.5
proteasome activator subunit 2
chr1_+_112674416 4.64 ENST00000413052.6
ENST00000369645.5
Mov10 RISC complex RNA helicase
chr10_+_113679839 4.55 ENST00000369318.8
ENST00000369315.5
caspase 7
chr18_+_24014733 4.47 ENST00000317571.8
tetratricopeptide repeat domain 39C
chr14_+_24136152 4.46 ENST00000559123.5
ENST00000206451.11
ENST00000382708.7
ENST00000561435.5
proteasome activator subunit 1
chr2_-_162318613 4.42 ENST00000649979.2
ENST00000421365.2
interferon induced with helicase C domain 1
chr11_+_94128834 4.40 ENST00000227638.8
ENST00000436171.2
pannexin 1
chr4_+_99574812 4.36 ENST00000422897.6
ENST00000265517.10
microsomal triglyceride transfer protein
chr20_+_408030 4.31 ENST00000640614.1
ENST00000475269.5
RANBP2-type and C3HC4-type zinc finger containing 1
chr4_-_168480477 4.29 ENST00000514748.5
ENST00000512371.1
ENST00000505890.5
ENST00000682922.1
ENST00000511577.5
DExD/H-box 60 like
chr6_+_26365176 4.28 ENST00000377708.7
butyrophilin subfamily 3 member A2
chr22_-_36239517 4.27 ENST00000358502.10
ENST00000451256.6
apolipoprotein L2
chr6_-_36387566 4.26 ENST00000339796.9
ENST00000627426.2
ETS variant transcription factor 7
chr6_+_26365215 4.22 ENST00000527422.5
ENST00000356386.6
ENST00000396948.5
butyrophilin subfamily 3 member A2
chr1_+_112674722 4.22 ENST00000357443.2
Mov10 RISC complex RNA helicase
chr6_+_26365159 4.18 ENST00000532865.5
ENST00000396934.7
ENST00000508906.6
ENST00000530653.5
ENST00000527417.5
butyrophilin subfamily 3 member A2
chr1_+_112674649 4.09 ENST00000369644.5
Mov10 RISC complex RNA helicase
chr10_+_89301932 4.07 ENST00000371826.4
ENST00000679755.1
interferon induced protein with tetratricopeptide repeats 2
chr12_+_112978460 4.01 ENST00000449768.2
2'-5'-oligoadenylate synthetase 2
chr12_+_112978424 4.01 ENST00000680685.1
ENST00000620097.2
2'-5'-oligoadenylate synthetase 2
chr12_-_213656 3.91 ENST00000359674.8
solute carrier family 6 member 12
chr12_+_6452024 3.84 ENST00000266556.8
ENST00000544021.5
TAP binding protein like
chr7_-_139109337 3.77 ENST00000464606.5
zinc finger CCCH-type containing, antiviral 1
chr12_-_214146 3.60 ENST00000684302.1
solute carrier family 6 member 12
chr15_+_75201873 3.11 ENST00000394987.5
chromosome 15 open reading frame 39
chr11_+_124865425 3.11 ENST00000397801.6
roundabout guidance receptor 3
chr10_-_47384261 3.10 ENST00000591025.1
ENST00000585316.3
zinc finger protein 488
chr10_-_22003678 3.05 ENST00000376980.8
DnaJ heat shock protein family (Hsp40) member C1
chr5_-_96808093 3.03 ENST00000296754.7
endoplasmic reticulum aminopeptidase 1
chr13_+_108629605 3.01 ENST00000457511.7
myosin XVI
chr6_+_26402289 3.00 ENST00000414912.2
butyrophilin subfamily 3 member A1
chr18_-_6414885 3.00 ENST00000317931.12
ENST00000400104.7
L3MBTL histone methyl-lysine binding protein 4
chr19_+_49928702 3.00 ENST00000595125.5
activating transcription factor 5
chr9_-_32526185 2.92 ENST00000379883.3
ENST00000379868.6
ENST00000679859.1
DExD/H-box helicase 58
chr1_-_161045961 2.91 ENST00000368021.7
upstream transcription factor 1
chr2_+_201116793 2.82 ENST00000441224.5
CASP8 and FADD like apoptosis regulator
chr1_-_154608140 2.77 ENST00000529168.2
ENST00000368474.9
ENST00000680305.1
ENST00000648231.2
adenosine deaminase RNA specific
chr20_+_408147 2.77 ENST00000441733.5
ENST00000353660.7
RANBP2-type and C3HC4-type zinc finger containing 1
chr5_-_136365476 2.58 ENST00000378459.7
ENST00000502753.4
ENST00000513104.6
ENST00000352189.8
transient receptor potential cation channel subfamily C member 7
chr6_+_31571957 2.21 ENST00000454783.5
lymphotoxin alpha
chr5_-_96807899 2.13 ENST00000503921.5
ENST00000508227.5
ENST00000507154.1
ENST00000443439.7
endoplasmic reticulum aminopeptidase 1
chrX_+_147911943 2.11 ENST00000621453.4
ENST00000218200.12
ENST00000370471.7
ENST00000440235.6
ENST00000370477.5
ENST00000621987.4
FMRP translational regulator 1
chr3_-_127591036 2.09 ENST00000489960.5
ENST00000490290.5
transmembrane protein adipocyte associated 1
chr21_-_41926680 2.07 ENST00000329623.11
C2 calcium dependent domain containing 2
chr2_-_189179754 2.00 ENST00000374866.9
ENST00000618828.1
collagen type V alpha 2 chain
chr10_-_100286341 1.96 ENST00000441611.5
ENST00000614731.4
biogenesis of lysosomal organelles complex 1 subunit 2
chr12_-_98894830 1.95 ENST00000549797.5
ENST00000333732.11
ENST00000341752.11
ankyrin repeat and sterile alpha motif domain containing 1B
chr2_+_6865557 1.94 ENST00000680607.1
ENST00000680320.1
ENST00000442639.6
radical S-adenosyl methionine domain containing 2
chr15_-_55319107 1.85 ENST00000565225.1
ENST00000436697.3
ENST00000567948.1
ENST00000563262.5
PIGB opposite strand 1
RAB27A, member RAS oncogene family
chr10_-_100286660 1.78 ENST00000370372.7
biogenesis of lysosomal organelles complex 1 subunit 2
chr18_+_24014390 1.75 ENST00000584250.1
tetratricopeptide repeat domain 39C
chr5_-_157058396 1.73 ENST00000518745.1
ENST00000339252.7
ENST00000625904.2
hepatitis A virus cellular receptor 1
chr6_-_30213379 1.71 ENST00000418026.1
ENST00000454678.7
ENST00000416596.5
ENST00000453195.5
tripartite motif containing 26
chr6_+_31572279 1.70 ENST00000418386.3
lymphotoxin alpha
chrX_+_147912039 1.56 ENST00000334557.10
ENST00000439526.6
FMRP translational regulator 1
chr19_+_50384323 1.54 ENST00000599857.7
ENST00000613923.6
ENST00000601098.6
ENST00000440232.7
ENST00000595904.6
ENST00000593887.1
DNA polymerase delta 1, catalytic subunit
chr9_+_74497308 1.49 ENST00000376896.8
RAR related orphan receptor B
chr20_-_35284715 1.49 ENST00000374436.7
ENST00000675032.1
eukaryotic translation initiation factor 6
chr20_+_62804794 1.47 ENST00000290291.10
opioid growth factor receptor
chr19_+_49474208 1.44 ENST00000597551.6
ENST00000596435.5
ENST00000204637.6
ENST00000600429.5
fms related receptor tyrosine kinase 3 ligand
chr8_-_143986425 1.41 ENST00000313059.9
ENST00000524918.5
ENST00000313028.12
ENST00000525773.5
poly(ADP-ribose) polymerase family member 10
chr5_+_140691591 1.39 ENST00000508522.5
ENST00000448069.2
histidyl-tRNA synthetase 2, mitochondrial
chr1_+_149475045 1.34 ENST00000651566.2
NBPF member 19
chr20_-_35284745 1.32 ENST00000374443.7
ENST00000374450.8
eukaryotic translation initiation factor 6
chr1_-_177970213 1.30 ENST00000464631.6
SEC16 homolog B, endoplasmic reticulum export factor
chr1_+_151156627 1.30 ENST00000368910.4
TNF alpha induced protein 8 like 2
chrX_+_147911910 1.30 ENST00000370475.9
FMRP translational regulator 1
chr1_+_25272439 1.28 ENST00000648012.1
Rh blood group D antigen
chr3_+_187368367 1.27 ENST00000259030.3
receptor transporter protein 4
chr4_-_155953851 1.26 ENST00000679136.1
ENST00000433477.4
ENST00000679996.1
ENST00000680741.1
ENST00000680553.1
ENST00000679942.1
cathepsin O
chr20_+_45881218 1.24 ENST00000372523.1
zinc finger SWIM-type containing 1
chr1_+_111755892 1.19 ENST00000369702.5
ENST00000680627.1
ENST00000680518.1
DEAD-box helicase 20
chr7_-_106285898 1.13 ENST00000424768.2
ENST00000681255.1
nicotinamide phosphoribosyltransferase
chr1_+_110034607 1.11 ENST00000369795.8
striatin interacting protein 1
chr22_+_39040857 1.07 ENST00000381565.2
ENST00000308521.10
apolipoprotein B mRNA editing enzyme catalytic subunit 3F
chr3_-_195811916 0.99 ENST00000463781.8
mucin 4, cell surface associated
chr19_+_49929196 0.98 ENST00000423777.7
ENST00000600336.1
ENST00000597227.5
activating transcription factor 5
chr20_-_21514046 0.95 ENST00000377142.5
NK2 homeobox 2
chr19_+_49474561 0.94 ENST00000594009.5
ENST00000595510.1
ENST00000595815.1
fms related receptor tyrosine kinase 3 ligand
novel transcript
chr2_-_118847638 0.93 ENST00000295206.7
engrailed homeobox 1
chr8_-_66613208 0.90 ENST00000522677.8
MYB proto-oncogene like 1
chr3_+_42149222 0.90 ENST00000449246.5
ENST00000613405.4
trafficking kinesin protein 1
chr16_+_66934439 0.88 ENST00000417689.6
ENST00000561697.5
carboxylesterase 2
chr14_+_73058521 0.83 ENST00000527432.5
ENST00000531500.5
ENST00000261973.12
ENST00000525321.5
ENST00000526754.5
RNA binding motif protein 25
chr1_-_147172456 0.79 ENST00000254101.4
protein kinase AMP-activated non-catalytic subunit beta 2
chr12_+_4649097 0.78 ENST00000648836.1
ENST00000266544.10
novel protein
NADH:ubiquinone oxidoreductase subunit A9
chr7_-_127252919 0.71 ENST00000339582.7
glutamate metabotropic receptor 8
chr1_+_25272492 0.66 ENST00000454452.6
Rh blood group D antigen
chr14_-_91510450 0.66 ENST00000555462.5
protein phosphatase 4 regulatory subunit 3A
chr8_-_23069012 0.65 ENST00000347739.3
ENST00000276431.9
TNF receptor superfamily member 10b
chr3_+_155870623 0.64 ENST00000295920.7
ENST00000496455.7
guanine monophosphate synthase
chr10_-_118595637 0.60 ENST00000239032.4
prolactin releasing hormone receptor
chr1_+_236394268 0.59 ENST00000334232.9
EDAR associated death domain
chr2_-_166494232 0.49 ENST00000441411.2
ENST00000643258.1
ENST00000419992.6
sodium voltage-gated channel alpha subunit 7
chr2_+_99154955 0.47 ENST00000393471.2
ENST00000393473.6
ENST00000651691.1
ENST00000449211.1
ENST00000434566.5
ENST00000410042.1
lipoyltransferase 1
novel LIPT1-MRPL30 readthrough
chr12_-_4649043 0.44 ENST00000545990.6
ENST00000228850.6
A-kinase anchoring protein 3
chr6_+_28225257 0.39 ENST00000531981.5
ENST00000425468.6
ENST00000252207.10
ENST00000531979.5
ENST00000527436.5
zinc finger and SCAN domain containing 9
chr2_-_73642413 0.39 ENST00000272425.4
N-acetyltransferase 8 (putative)
chr19_-_39846329 0.38 ENST00000599134.1
ENST00000597634.5
ENST00000598417.5
ENST00000601274.5
ENST00000594309.5
ENST00000221801.8
fibrillarin
chr1_+_151156659 0.36 ENST00000602841.5
sodium channel modifier 1
chr2_-_37156942 0.28 ENST00000680273.1
ENST00000233057.9
ENST00000679979.1
ENST00000679507.1
ENST00000681463.1
ENST00000395127.6
eukaryotic translation initiation factor 2 alpha kinase 2
chr2_+_69013337 0.27 ENST00000463335.2
ANTXR cell adhesion molecule 1
chr7_+_143132069 0.26 ENST00000291009.4
prolactin induced protein
chr20_+_408278 0.25 ENST00000356286.10
ENST00000382181.2
ENST00000400247.3
RANBP2-type and C3HC4-type zinc finger containing 1
chr19_-_17405554 0.23 ENST00000252593.7
bone marrow stromal cell antigen 2
chr9_-_98192614 0.23 ENST00000375077.5
coronin 2A
chr11_+_66241227 0.23 ENST00000531597.1
phosphofurin acidic cluster sorting protein 1
chr8_+_108443601 0.21 ENST00000524143.5
ENST00000220853.8
ER membrane protein complex subunit 2
chr14_-_75051426 0.12 ENST00000556257.5
ENST00000355774.7
ENST00000557648.1
ENST00000553263.1
ENST00000380968.6
mutL homolog 3
chr1_-_177969907 0.08 ENST00000308284.10
SEC16 homolog B, endoplasmic reticulum export factor
chr2_-_37157093 0.07 ENST00000681507.1
eukaryotic translation initiation factor 2 alpha kinase 2
chr9_-_92325577 0.06 ENST00000358855.8
ENST00000421075.6
ENST00000536624.5
nucleolar protein 8
chr1_-_161044941 0.04 ENST00000368020.5
upstream transcription factor 1
chr12_-_8066331 0.00 ENST00000546241.1
ENST00000307637.5
complement C3a receptor 1
chr22_+_31496139 0.00 ENST00000540643.5
SFI1 centrin binding protein

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
15.6 46.7 GO:0046967 cytosol to ER transport(GO:0046967)
9.4 47.2 GO:0034344 type III interferon production(GO:0034343) regulation of type III interferon production(GO:0034344)
6.5 96.9 GO:0035457 cellular response to interferon-alpha(GO:0035457)
6.3 31.6 GO:1900245 positive regulation of MDA-5 signaling pathway(GO:1900245)
5.4 54.0 GO:0070212 protein poly-ADP-ribosylation(GO:0070212)
5.1 20.5 GO:0000738 DNA catabolic process, exonucleolytic(GO:0000738)
4.9 58.4 GO:0018377 protein myristoylation(GO:0018377)
4.1 16.6 GO:0033634 positive regulation of cell-cell adhesion mediated by integrin(GO:0033634)
3.8 45.4 GO:0060700 regulation of ribonuclease activity(GO:0060700)
3.4 10.2 GO:0046077 dUDP biosynthetic process(GO:0006227) dTDP biosynthetic process(GO:0006233) pyrimidine nucleoside diphosphate biosynthetic process(GO:0009139) pyrimidine deoxyribonucleoside diphosphate metabolic process(GO:0009196) pyrimidine deoxyribonucleoside diphosphate biosynthetic process(GO:0009197) dTDP metabolic process(GO:0046072) dUDP metabolic process(GO:0046077)
3.2 12.9 GO:0090086 negative regulation of protein deubiquitination(GO:0090086)
2.0 12.1 GO:2000110 negative regulation of macrophage apoptotic process(GO:2000110)
1.7 10.4 GO:2001180 negative regulation of interleukin-10 secretion(GO:2001180)
1.7 5.0 GO:1901254 modulation by host of viral RNA genome replication(GO:0044830) positive regulation of intracellular transport of viral material(GO:1901254)
1.5 18.3 GO:0034058 endosomal vesicle fusion(GO:0034058)
1.5 29.4 GO:0003374 dynamin polymerization involved in membrane fission(GO:0003373) dynamin polymerization involved in mitochondrial fission(GO:0003374)
1.5 4.4 GO:0050717 positive regulation of interleukin-1 alpha secretion(GO:0050717)
1.3 13.1 GO:0032020 ISG15-protein conjugation(GO:0032020)
1.3 3.9 GO:0002876 positive regulation of chronic inflammatory response to antigenic stimulus(GO:0002876)
1.2 9.5 GO:0072734 response to staurosporine(GO:0072733) cellular response to staurosporine(GO:0072734)
1.2 13.0 GO:0098795 mRNA cleavage involved in gene silencing by miRNA(GO:0035279) mRNA cleavage involved in gene silencing(GO:0098795)
1.2 5.8 GO:0010513 positive regulation of phosphatidylinositol biosynthetic process(GO:0010513)
1.0 6.1 GO:0070383 DNA cytosine deamination(GO:0070383)
1.0 7.0 GO:0000255 allantoin metabolic process(GO:0000255)
0.9 23.6 GO:0072643 interferon-gamma secretion(GO:0072643)
0.8 7.3 GO:0097039 protein linear polyubiquitination(GO:0097039)
0.7 4.4 GO:0034196 acylglycerol transport(GO:0034196) triglyceride transport(GO:0034197)
0.7 2.0 GO:1903225 negative regulation of endodermal cell differentiation(GO:1903225)
0.6 2.4 GO:0090290 positive regulation of osteoclast proliferation(GO:0090290)
0.6 4.7 GO:0031584 activation of phospholipase D activity(GO:0031584)
0.6 2.8 GO:1902626 assembly of large subunit precursor of preribosome(GO:1902626)
0.5 3.0 GO:0000432 regulation of transcription from RNA polymerase II promoter by glucose(GO:0000430) positive regulation of transcription from RNA polymerase II promoter by glucose(GO:0000432) late viral transcription(GO:0019086)
0.5 2.8 GO:1900369 negative regulation of RNA interference(GO:1900369)
0.5 20.6 GO:0035456 response to interferon-beta(GO:0035456)
0.4 47.1 GO:0042590 antigen processing and presentation of exogenous peptide antigen via MHC class I(GO:0042590)
0.4 7.5 GO:0015812 gamma-aminobutyric acid transport(GO:0015812)
0.3 13.9 GO:0010390 histone monoubiquitination(GO:0010390)
0.3 3.1 GO:0016199 axon midline choice point recognition(GO:0016199)
0.3 18.5 GO:0019835 cytolysis(GO:0019835)
0.3 2.0 GO:1900383 regulation of synaptic plasticity by receptor localization to synapse(GO:1900383)
0.3 1.9 GO:2000553 positive regulation of toll-like receptor 9 signaling pathway(GO:0034165) positive regulation of T-helper 2 cell cytokine production(GO:2000553)
0.3 0.9 GO:0021530 spinal cord oligodendrocyte cell differentiation(GO:0021529) spinal cord oligodendrocyte cell fate specification(GO:0021530)
0.3 1.8 GO:1903435 positive regulation of constitutive secretory pathway(GO:1903435)
0.3 4.0 GO:0021891 olfactory bulb interneuron development(GO:0021891)
0.3 2.6 GO:0006828 manganese ion transport(GO:0006828)
0.3 1.5 GO:0006287 base-excision repair, gap-filling(GO:0006287)
0.2 3.7 GO:0060155 platelet dense granule organization(GO:0060155)
0.2 0.9 GO:0098957 anterograde axonal transport of mitochondrion(GO:0098957)
0.2 39.6 GO:0015992 proton transport(GO:0015992)
0.2 15.7 GO:0034340 response to type I interferon(GO:0034340)
0.2 12.2 GO:0007157 heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules(GO:0007157)
0.2 0.9 GO:0061743 motor learning(GO:0061743)
0.1 2.1 GO:0040016 embryonic cleavage(GO:0040016)
0.1 1.5 GO:0035881 amacrine cell differentiation(GO:0035881)
0.1 0.6 GO:0006177 GMP biosynthetic process(GO:0006177)
0.1 0.4 GO:0033967 box C/D snoRNA 3'-end processing(GO:0000494) box C/D snoRNA metabolic process(GO:0033967) box C/D snoRNA processing(GO:0034963) histone glutamine methylation(GO:1990258)
0.1 3.1 GO:0048714 positive regulation of oligodendrocyte differentiation(GO:0048714)
0.1 3.0 GO:0002474 antigen processing and presentation of peptide antigen via MHC class I(GO:0002474)
0.1 1.4 GO:0070863 positive regulation of protein exit from endoplasmic reticulum(GO:0070863)
0.1 0.3 GO:0035455 response to interferon-alpha(GO:0035455)
0.1 1.5 GO:0038003 opioid receptor signaling pathway(GO:0038003)
0.1 7.3 GO:0002456 T cell mediated immunity(GO:0002456)
0.1 1.2 GO:0000244 spliceosomal tri-snRNP complex assembly(GO:0000244)
0.1 3.0 GO:0090200 positive regulation of release of cytochrome c from mitochondria(GO:0090200)
0.1 1.7 GO:1902187 negative regulation of viral release from host cell(GO:1902187)
0.1 4.3 GO:0006953 acute-phase response(GO:0006953)
0.1 0.5 GO:0009249 protein lipoylation(GO:0009249)
0.1 1.0 GO:0030277 maintenance of gastrointestinal epithelium(GO:0030277)
0.0 0.7 GO:0007196 adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway(GO:0007196)
0.0 0.6 GO:0007250 activation of NF-kappaB-inducing kinase activity(GO:0007250)
0.0 1.5 GO:0001580 detection of chemical stimulus involved in sensory perception of bitter taste(GO:0001580)
0.0 3.0 GO:0032781 positive regulation of ATPase activity(GO:0032781)
0.0 1.4 GO:0006418 tRNA aminoacylation for protein translation(GO:0006418)
0.0 0.8 GO:0006853 carnitine shuttle(GO:0006853)
0.0 0.8 GO:0006744 ubiquinone biosynthetic process(GO:0006744) quinone biosynthetic process(GO:1901663)
0.0 1.1 GO:0030866 cortical actin cytoskeleton organization(GO:0030866)
0.0 3.0 GO:0021549 cerebellum development(GO:0021549)
0.0 10.2 GO:0006869 lipid transport(GO:0006869)
0.0 15.0 GO:0001525 angiogenesis(GO:0001525)
0.0 0.9 GO:0006693 prostanoid metabolic process(GO:0006692) prostaglandin metabolic process(GO:0006693)
0.0 1.3 GO:0050728 negative regulation of inflammatory response(GO:0050728)
0.0 0.2 GO:0034975 protein folding in endoplasmic reticulum(GO:0034975)
0.0 0.5 GO:0055078 sodium ion homeostasis(GO:0055078)
0.0 0.4 GO:0050435 beta-amyloid metabolic process(GO:0050435)
0.0 0.4 GO:0010738 regulation of protein kinase A signaling(GO:0010738)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
6.7 46.7 GO:0042825 TAP complex(GO:0042825)
3.5 14.0 GO:0008537 proteasome activator complex(GO:0008537)
2.7 21.7 GO:1990111 spermatoproteasome complex(GO:1990111)
1.7 5.0 GO:1902737 dendritic filopodium(GO:1902737)
1.5 6.1 GO:0030895 apolipoprotein B mRNA editing enzyme complex(GO:0030895)
1.0 7.3 GO:0071797 LUBAC complex(GO:0071797)
0.7 2.0 GO:0005588 collagen type V trimer(GO:0005588)
0.5 19.1 GO:0034385 very-low-density lipoprotein particle(GO:0034361) triglyceride-rich lipoprotein particle(GO:0034385)
0.4 2.8 GO:0044530 supraspliceosomal complex(GO:0044530)
0.3 1.5 GO:0043625 delta DNA polymerase complex(GO:0043625)
0.3 22.8 GO:0015030 Cajal body(GO:0015030)
0.3 16.3 GO:0043202 lysosomal lumen(GO:0043202)
0.3 4.4 GO:0032059 bleb(GO:0032059)
0.2 1.2 GO:0090571 RNA polymerase II transcription repressor complex(GO:0090571)
0.2 12.9 GO:0019005 SCF ubiquitin ligase complex(GO:0019005)
0.1 3.0 GO:0048188 Set1C/COMPASS complex(GO:0048188)
0.1 3.7 GO:0031083 gamma-tubulin complex(GO:0000930) BLOC-1 complex(GO:0031083)
0.1 1.8 GO:0033093 Weibel-Palade body(GO:0033093)
0.1 2.8 GO:0030687 preribosome, large subunit precursor(GO:0030687)
0.1 210.5 GO:0005739 mitochondrion(GO:0005739)
0.1 12.2 GO:0005913 cell-cell adherens junction(GO:0005913)
0.1 4.7 GO:0031526 brush border membrane(GO:0031526)
0.1 2.4 GO:0031233 intrinsic component of external side of plasma membrane(GO:0031233)
0.1 0.8 GO:0031588 nucleotide-activated protein kinase complex(GO:0031588)
0.1 12.2 GO:0072562 blood microparticle(GO:0072562)
0.0 75.1 GO:0005615 extracellular space(GO:0005615)
0.0 16.7 GO:0005765 lysosomal membrane(GO:0005765) lytic vacuole membrane(GO:0098852)
0.0 0.4 GO:0035686 sperm fibrous sheath(GO:0035686)
0.0 17.3 GO:0005769 early endosome(GO:0005769)
0.0 8.5 GO:0045111 intermediate filament cytoskeleton(GO:0045111)
0.0 2.6 GO:0005801 cis-Golgi network(GO:0005801)
0.0 0.5 GO:0097386 glial cell projection(GO:0097386)
0.0 17.9 GO:0005925 focal adhesion(GO:0005925)
0.0 3.0 GO:0016459 myosin complex(GO:0016459)
0.0 2.9 GO:0032587 ruffle membrane(GO:0032587)
0.0 0.1 GO:0005712 chiasma(GO:0005712)
0.0 6.1 GO:0048471 perinuclear region of cytoplasm(GO:0048471)
0.0 3.2 GO:0005788 endoplasmic reticulum lumen(GO:0005788)
0.0 1.3 GO:0031514 motile cilium(GO:0031514)
0.0 3.0 GO:0031965 nuclear membrane(GO:0031965)
0.0 64.0 GO:0005829 cytosol(GO:0005829)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
6.9 103.8 GO:0001730 2'-5'-oligoadenylate synthetase activity(GO:0001730)
6.8 20.5 GO:0008859 exoribonuclease II activity(GO:0008859)
5.9 41.6 GO:0015333 peptide:proton symporter activity(GO:0015333) proton-dependent peptide secondary active transmembrane transporter activity(GO:0022897)
5.8 46.7 GO:0015440 peptide-transporting ATPase activity(GO:0015440) MHC class Ib protein binding(GO:0023029)
3.4 10.2 GO:0004798 thymidylate kinase activity(GO:0004798)
3.3 16.6 GO:0030298 receptor signaling protein tyrosine kinase activator activity(GO:0030298) CCR1 chemokine receptor binding(GO:0031726)
1.9 52.6 GO:0070403 NAD+ binding(GO:0070403)
1.7 14.0 GO:0061133 endopeptidase activator activity(GO:0061133)
1.3 5.2 GO:0005151 interleukin-1, Type II receptor binding(GO:0005151)
1.2 8.2 GO:0042296 ISG15 transferase activity(GO:0042296)
1.0 5.0 GO:0047844 deoxycytidine deaminase activity(GO:0047844)
0.9 25.5 GO:0003950 NAD+ ADP-ribosyltransferase activity(GO:0003950)
0.9 7.5 GO:0005332 gamma-aminobutyric acid:sodium symporter activity(GO:0005332)
0.9 4.4 GO:0055077 gap junction hemi-channel activity(GO:0055077)
0.8 4.7 GO:0031752 D5 dopamine receptor binding(GO:0031752)
0.7 21.7 GO:0070003 threonine-type endopeptidase activity(GO:0004298) threonine-type peptidase activity(GO:0070003)
0.7 5.0 GO:0034046 poly(G) binding(GO:0034046)
0.6 79.2 GO:0003725 double-stranded RNA binding(GO:0003725)
0.5 12.2 GO:0070006 metalloaminopeptidase activity(GO:0070006)
0.5 5.8 GO:0051378 amine binding(GO:0043176) serotonin binding(GO:0051378)
0.3 4.9 GO:0031386 protein tag(GO:0031386)
0.3 11.0 GO:0005031 tumor necrosis factor-activated receptor activity(GO:0005031) death receptor activity(GO:0005035)
0.2 4.3 GO:0008035 high-density lipoprotein particle binding(GO:0008035)
0.2 6.7 GO:0097200 cysteine-type endopeptidase activity involved in execution phase of apoptosis(GO:0097200)
0.2 2.6 GO:0015279 store-operated calcium channel activity(GO:0015279)
0.2 1.1 GO:0004126 cytidine deaminase activity(GO:0004126)
0.2 1.3 GO:0031849 olfactory receptor binding(GO:0031849)
0.2 0.9 GO:0047374 methylumbelliferyl-acetate deacetylase activity(GO:0047374)
0.2 1.0 GO:0030197 extracellular matrix constituent, lubricant activity(GO:0030197)
0.2 0.5 GO:0016979 lipoate-protein ligase activity(GO:0016979)
0.1 12.1 GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding(GO:0000979)
0.1 19.1 GO:0005254 chloride channel activity(GO:0005254)
0.1 0.4 GO:0036009 protein-glutamine N-methyltransferase activity(GO:0036009) histone-glutamine methyltransferase activity(GO:1990259)
0.1 1.3 GO:0043023 ribosomal large subunit binding(GO:0043023)
0.1 1.5 GO:0008296 3'-5'-exodeoxyribonuclease activity(GO:0008296)
0.1 3.0 GO:0001671 ATPase activator activity(GO:0001671)
0.1 1.5 GO:0004985 opioid receptor activity(GO:0004985)
0.1 7.8 GO:0016667 oxidoreductase activity, acting on a sulfur group of donors(GO:0016667)
0.1 39.0 GO:0003924 GTPase activity(GO:0003924)
0.1 3.9 GO:0005164 tumor necrosis factor receptor binding(GO:0005164)
0.1 3.7 GO:0043015 gamma-tubulin binding(GO:0043015)
0.1 9.0 GO:0004843 thiol-dependent ubiquitin-specific protease activity(GO:0004843)
0.1 0.9 GO:0001135 transcription factor activity, RNA polymerase II transcription factor recruiting(GO:0001135)
0.1 0.6 GO:0004983 neuropeptide Y receptor activity(GO:0004983)
0.1 6.4 GO:0051117 ATPase binding(GO:0051117)
0.1 12.3 GO:0004386 helicase activity(GO:0004386)
0.1 13.9 GO:0042393 histone binding(GO:0042393)
0.1 4.4 GO:0005548 phospholipid transporter activity(GO:0005548)
0.1 0.8 GO:0004679 AMP-activated protein kinase activity(GO:0004679)
0.0 0.4 GO:0004468 lysine N-acetyltransferase activity, acting on acetyl phosphate as donor(GO:0004468)
0.0 0.9 GO:0050811 GABA receptor binding(GO:0050811)
0.0 1.4 GO:0004812 aminoacyl-tRNA ligase activity(GO:0004812) ligase activity, forming carbon-oxygen bonds(GO:0016875) ligase activity, forming aminoacyl-tRNA and related compounds(GO:0016876)
0.0 1.9 GO:0051539 4 iron, 4 sulfur cluster binding(GO:0051539)
0.0 0.6 GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor(GO:0016884)
0.0 2.0 GO:0046875 ephrin receptor binding(GO:0046875)
0.0 23.9 GO:0004842 ubiquitin-protein transferase activity(GO:0004842)
0.0 10.1 GO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding(GO:0001227)
0.0 7.0 GO:0004713 protein tyrosine kinase activity(GO:0004713)
0.0 2.0 GO:0046332 SMAD binding(GO:0046332)
0.0 2.4 GO:0030971 receptor tyrosine kinase binding(GO:0030971)
0.0 11.8 GO:0005096 GTPase activator activity(GO:0005096)
0.0 57.2 GO:0042802 identical protein binding(GO:0042802)
0.0 19.6 GO:0008270 zinc ion binding(GO:0008270)
0.0 4.0 GO:0003714 transcription corepressor activity(GO:0003714)
0.0 0.1 GO:0019237 centromeric DNA binding(GO:0019237)
0.0 0.7 GO:0008066 glutamate receptor activity(GO:0008066)
0.0 1.3 GO:0004197 cysteine-type endopeptidase activity(GO:0004197)
0.0 0.3 GO:0019864 IgG binding(GO:0019864)
0.0 3.0 GO:0003774 motor activity(GO:0003774)
0.0 0.8 GO:0050136 NADH dehydrogenase (ubiquinone) activity(GO:0008137) NADH dehydrogenase (quinone) activity(GO:0050136)
0.0 0.5 GO:0005248 voltage-gated sodium channel activity(GO:0005248) voltage-gated ion channel activity involved in regulation of postsynaptic membrane potential(GO:1905030)

Gene overrepresentation in curated gene sets: canonical pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.3 7.0 PID IL5 PATHWAY IL5-mediated signaling events
0.2 4.7 PID THROMBIN PAR4 PATHWAY PAR4-mediated thrombin signaling events
0.2 16.6 PID SYNDECAN 4 PATHWAY Syndecan-4-mediated signaling events
0.2 9.5 SA CASPASE CASCADE Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade.
0.2 21.2 PID IL4 2PATHWAY IL4-mediated signaling events
0.2 41.1 PID P53 DOWNSTREAM PATHWAY Direct p53 effectors
0.1 4.0 PID PRL SIGNALING EVENTS PATHWAY Signaling events mediated by PRL
0.1 12.1 PID SMAD2 3NUCLEAR PATHWAY Regulation of nuclear SMAD2/3 signaling
0.1 3.0 PID P38 ALPHA BETA DOWNSTREAM PATHWAY Signaling mediated by p38-alpha and p38-beta
0.1 4.1 PID TELOMERASE PATHWAY Regulation of Telomerase
0.0 2.0 NABA COLLAGENS Genes encoding collagen proteins
0.0 0.9 PID E2F PATHWAY E2F transcription factor network

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
2.8 47.2 REACTOME TRAF3 DEPENDENT IRF ACTIVATION PATHWAY Genes involved in TRAF3-dependent IRF activation pathway
2.6 295.7 REACTOME INTERFERON ALPHA BETA SIGNALING Genes involved in Interferon alpha/beta signaling
2.0 47.0 REACTOME ANTIGEN PRESENTATION FOLDING ASSEMBLY AND PEPTIDE LOADING OF CLASS I MHC Genes involved in Antigen Presentation: Folding, assembly and peptide loading of class I MHC
0.6 40.7 REACTOME VIF MEDIATED DEGRADATION OF APOBEC3G Genes involved in Vif-mediated degradation of APOBEC3G
0.5 48.6 REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS Genes involved in Amino acid and oligopeptide SLC transporters
0.4 5.8 REACTOME SEROTONIN RECEPTORS Genes involved in Serotonin receptors
0.4 7.0 REACTOME IL 7 SIGNALING Genes involved in Interleukin-7 signaling
0.4 13.0 REACTOME PRE NOTCH TRANSCRIPTION AND TRANSLATION Genes involved in Pre-NOTCH Transcription and Translation
0.3 4.4 REACTOME THE NLRP3 INFLAMMASOME Genes involved in The NLRP3 inflammasome
0.3 15.9 REACTOME INTRINSIC PATHWAY FOR APOPTOSIS Genes involved in Intrinsic Pathway for Apoptosis
0.3 25.5 REACTOME RIG I MDA5 MEDIATED INDUCTION OF IFN ALPHA BETA PATHWAYS Genes involved in RIG-I/MDA5 mediated induction of IFN-alpha/beta pathways
0.3 2.6 REACTOME ELEVATION OF CYTOSOLIC CA2 LEVELS Genes involved in Elevation of cytosolic Ca2+ levels
0.2 16.0 REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES Genes involved in Chemokine receptors bind chemokines
0.2 4.4 REACTOME CHYLOMICRON MEDIATED LIPID TRANSPORT Genes involved in Chylomicron-mediated lipid transport
0.1 4.7 REACTOME THROMBOXANE SIGNALLING THROUGH TP RECEPTOR Genes involved in Thromboxane signalling through TP receptor
0.1 32.4 REACTOME ANTIGEN PROCESSING UBIQUITINATION PROTEASOME DEGRADATION Genes involved in Antigen processing: Ubiquitination & Proteasome degradation
0.1 8.5 REACTOME INTERFERON GAMMA SIGNALING Genes involved in Interferon gamma signaling
0.1 1.5 REACTOME POL SWITCHING Genes involved in Polymerase switching
0.1 1.4 REACTOME MITOCHONDRIAL TRNA AMINOACYLATION Genes involved in Mitochondrial tRNA aminoacylation
0.1 1.8 REACTOME INSULIN SYNTHESIS AND PROCESSING Genes involved in Insulin Synthesis and Processing
0.1 3.1 REACTOME SIGNALING BY ROBO RECEPTOR Genes involved in Signaling by Robo receptor
0.1 11.8 REACTOME SIGNALING BY RHO GTPASES Genes involved in Signaling by Rho GTPases
0.0 0.6 REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS Genes involved in Purine ribonucleoside monophosphate biosynthesis
0.0 0.8 REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK Genes involved in Regulation of Rheb GTPase activity by AMPK
0.0 0.7 REACTOME CLASS C 3 METABOTROPIC GLUTAMATE PHEROMONE RECEPTORS Genes involved in Class C/3 (Metabotropic glutamate/pheromone receptors)
0.0 1.0 REACTOME TERMINATION OF O GLYCAN BIOSYNTHESIS Genes involved in Termination of O-glycan biosynthesis
0.0 2.0 REACTOME NCAM1 INTERACTIONS Genes involved in NCAM1 interactions
0.0 0.9 REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS Genes involved in Regulation of gene expression in beta cells
0.0 1.2 REACTOME METABOLISM OF NON CODING RNA Genes involved in Metabolism of non-coding RNA
0.0 0.2 REACTOME NEF MEDIATED DOWNREGULATION OF MHC CLASS I COMPLEX CELL SURFACE EXPRESSION Genes involved in Nef mediated downregulation of MHC class I complex cell surface expression
0.0 0.5 REACTOME INTERACTION BETWEEN L1 AND ANKYRINS Genes involved in Interaction between L1 and Ankyrins
0.0 1.3 REACTOME MHC CLASS II ANTIGEN PRESENTATION Genes involved in MHC class II antigen presentation