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Inflammatory response time course, HUVEC (Wada, 2009)

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Results for UGCAGUC

Z-value: 0.35

Motif logo

miRNA associated with seed UGCAGUC

NamemiRBASE accession

Activity profile of UGCAGUC motif

Sorted Z-values of UGCAGUC motif

Network of associatons between targets according to the STRING database.

First level regulatory network of UGCAGUC

PNG image of the network

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Promoter Score Transcript Gene Gene Info
chr5_+_128083757 0.58 ENST00000262461.7
ENST00000628403.2
ENST00000343225.4
solute carrier family 12 member 2
chr10_-_103855406 0.49 ENST00000355946.6
ENST00000369774.8
SH3 and PX domains 2A
chr3_-_98901656 0.42 ENST00000326840.11
discoidin, CUB and LCCL domain containing 2
chr1_-_56579555 0.40 ENST00000371250.4
phospholipid phosphatase 3
chr12_-_49707368 0.38 ENST00000352151.9
ENST00000335154.10
formin like 3
chr8_-_118111806 0.33 ENST00000378204.7
exostosin glycosyltransferase 1
chr11_+_33257265 0.32 ENST00000303296.9
ENST00000379016.7
homeodomain interacting protein kinase 3
chr2_-_207166818 0.29 ENST00000423015.5
Kruppel like factor 7
chr7_+_28412511 0.26 ENST00000357727.7
cAMP responsive element binding protein 5
chr10_-_58267868 0.25 ENST00000373935.4
inositol polyphosphate multikinase
chr3_-_165196369 0.25 ENST00000475390.2
SLIT and NTRK like family member 3
chr10_-_60389833 0.24 ENST00000280772.7
ankyrin 3
chr12_-_16608183 0.23 ENST00000354662.5
ENST00000538051.5
LIM domain only 3
chr21_+_38805165 0.22 ENST00000360214.8
ETS proto-oncogene 2, transcription factor
chr18_+_22169580 0.20 ENST00000269216.10
GATA binding protein 6
chr11_-_134411854 0.20 ENST00000392580.5
beta-1,3-glucuronyltransferase 1
chr18_+_57435366 0.20 ENST00000491143.3
one cut homeobox 2
chr17_-_80476597 0.20 ENST00000306773.5
neuronal pentraxin 1
chr6_-_46325641 0.19 ENST00000330430.10
ENST00000405162.2
regulator of calcineurin 2
chr3_-_122514876 0.19 ENST00000493510.1
ENST00000476916.5
ENST00000344337.11
ENST00000465882.5
karyopherin subunit alpha 1
chr15_+_63189554 0.18 ENST00000559006.1
ENST00000321437.9
RAB8B, member RAS oncogene family
chrX_-_111270474 0.18 ENST00000324068.2
calpain 6
chr1_+_171485520 0.17 ENST00000647382.2
ENST00000392078.7
ENST00000367742.7
ENST00000338920.8
proline rich coiled-coil 2C
chr2_-_11344580 0.16 ENST00000616279.4
ENST00000315872.11
Rho associated coiled-coil containing protein kinase 2
chr3_+_30606574 0.16 ENST00000295754.10
ENST00000359013.4
transforming growth factor beta receptor 2
chr14_-_21269451 0.16 ENST00000336053.10
heterogeneous nuclear ribonucleoprotein C
chr19_+_1000419 0.15 ENST00000234389.3
glutamate ionotropic receptor NMDA type subunit 3B
chr13_-_49792675 0.15 ENST00000261667.8
karyopherin subunit alpha 3
chr17_-_63700100 0.15 ENST00000578993.5
ENST00000259006.8
ENST00000583211.5
LIM domain containing 2
chr18_+_65751000 0.14 ENST00000397968.4
cadherin 7
chr7_+_102285125 0.14 ENST00000536178.3
SH2B adaptor protein 2
chr4_-_75673112 0.14 ENST00000395719.7
ENST00000677489.1
G3BP stress granule assembly factor 2
chr20_-_14337602 0.13 ENST00000378053.3
ENST00000341420.5
fibronectin leucine rich transmembrane protein 3
chr14_+_70641896 0.13 ENST00000256367.3
tetratricopeptide repeat domain 9
chr16_-_11915878 0.13 ENST00000439887.6
ENST00000434724.7
G1 to S phase transition 1
chr3_+_77039836 0.13 ENST00000461745.5
roundabout guidance receptor 2
chr10_-_931684 0.12 ENST00000316157.8
La ribonucleoprotein 4B
chr11_-_73761051 0.12 ENST00000336083.8
ENST00000536566.5
ENST00000541588.5
ENST00000540771.5
ENST00000310653.10
RAB6A, member RAS oncogene family
chr5_+_168291599 0.12 ENST00000265293.9
WW and C2 domain containing 1
chr6_+_117907226 0.12 ENST00000360388.9
solute carrier family 35 member F1
chr1_-_23344314 0.11 ENST00000374612.5
ENST00000675048.1
ENST00000478691.5
heterogeneous nuclear ribonucleoprotein R
chr12_+_62260338 0.11 ENST00000353364.7
ENST00000549523.5
ubiquitin specific peptidase 15
chr1_+_38991239 0.11 ENST00000432648.8
ENST00000446189.6
ENST00000372984.8
akirin 1
chr3_-_21751189 0.11 ENST00000281523.8
zinc finger protein 385D
chr3_+_126983035 0.11 ENST00000393409.3
plexin A1
chr11_-_132943671 0.11 ENST00000331898.11
opioid binding protein/cell adhesion molecule like
chr14_+_92923143 0.11 ENST00000216492.10
ENST00000334654.4
chromogranin A
chr3_-_11720728 0.11 ENST00000445411.5
ENST00000273038.7
vestigial like family member 4
chr11_-_72793592 0.11 ENST00000536377.5
ENST00000359373.9
StAR related lipid transfer domain containing 10
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
chr2_+_118088432 0.10 ENST00000245787.9
insulin induced gene 2
chr16_+_50548387 0.10 ENST00000268459.6
NKD inhibitor of WNT signaling pathway 1
chr10_-_5813387 0.10 ENST00000456041.5
ENST00000380181.7
ENST00000418688.5
ENST00000609712.1
ENST00000380191.9
GDP dissociation inhibitor 2
chr3_-_12158901 0.10 ENST00000287814.5
TIMP metallopeptidase inhibitor 4
chr1_+_237042176 0.10 ENST00000366574.7
ryanodine receptor 2
chr11_-_86955385 0.10 ENST00000531380.2
frizzled class receptor 4
chr10_-_102502669 0.10 ENST00000487599.1
actin related protein 1A
chr12_+_110468803 0.10 ENST00000377673.10
family with sequence similarity 216 member A
chr2_+_227472132 0.10 ENST00000409979.6
ENST00000310078.13
ArfGAP with FG repeats 1
chr6_+_98834560 0.09 ENST00000328345.8
POU class 3 homeobox 2
chr2_+_165469647 0.09 ENST00000421875.5
ENST00000314499.11
ENST00000409664.5
ENST00000651982.1
cysteine and serine rich nuclear protein 3
chrX_-_133415478 0.09 ENST00000370828.4
glypican 4
chr1_+_11691688 0.09 ENST00000294485.6
dorsal inhibitory axon guidance protein
chr4_-_99657820 0.09 ENST00000511828.2
chromosome 4 open reading frame 54
chr7_+_92245960 0.09 ENST00000265742.8
ankyrin repeat and IBR domain containing 1
chr7_+_120273129 0.09 ENST00000331113.9
potassium voltage-gated channel subfamily D member 2
chr19_-_12723925 0.09 ENST00000425528.6
ENST00000589337.5
ENST00000588216.5
transportin 2
chr12_-_68933161 0.09 ENST00000549781.1
ENST00000551568.6
ENST00000548262.5
carboxypeptidase M
chr4_-_826113 0.08 ENST00000304062.11
complexin 1
chr10_+_80537902 0.08 ENST00000339284.6
ENST00000646907.2
SH2 domain containing 4B
chr5_-_134226059 0.08 ENST00000519718.1
ENST00000481195.6
novel protein
protein phosphatase 2 catalytic subunit alpha
chr4_-_72569204 0.08 ENST00000286657.10
ADAM metallopeptidase with thrombospondin type 1 motif 3
chr1_+_167220870 0.08 ENST00000367866.7
ENST00000429375.6
ENST00000541643.7
POU class 2 homeobox 1
chr11_-_70661762 0.08 ENST00000357171.7
ENST00000412252.5
ENST00000449833.6
ENST00000338508.8
SH3 and multiple ankyrin repeat domains 2
chr5_-_32444722 0.08 ENST00000265069.13
zinc finger RNA binding protein
chr2_+_17541157 0.07 ENST00000406397.1
visinin like 1
chr1_-_205356894 0.07 ENST00000367155.8
kelch domain containing 8A
chr2_-_2331225 0.07 ENST00000648627.1
ENST00000649663.1
ENST00000650560.1
ENST00000428368.7
ENST00000648316.1
ENST00000648665.1
ENST00000649313.1
ENST00000399161.7
ENST00000647738.2
myelin transcription factor 1 like
chr2_-_148020689 0.07 ENST00000457954.5
ENST00000392857.10
ENST00000540442.5
ENST00000535373.5
origin recognition complex subunit 4
chr10_-_118754956 0.07 ENST00000369151.8
CDK2 associated cullin domain 1
chr9_-_129028277 0.06 ENST00000372554.8
ENST00000372564.8
SH3 domain containing GRB2 like, endophilin B2
chrX_-_74925452 0.06 ENST00000055682.12
ENST00000616200.2
ENST00000642681.2
neurite extension and migration factor
chr3_+_68004231 0.06 ENST00000478136.6
TAFA chemokine like family member 1
chr10_-_92243246 0.06 ENST00000412050.8
ENST00000614585.4
cytoplasmic polyadenylation element binding protein 3
chr7_+_141074038 0.05 ENST00000565468.6
ENST00000610315.1
transmembrane protein 178B
chr16_-_46831134 0.05 ENST00000394806.6
ENST00000285697.9
chromosome 16 open reading frame 87
chr10_+_96832252 0.05 ENST00000676187.1
ENST00000675687.1
ENST00000676123.1
ENST00000675471.1
ENST00000371103.8
ENST00000421806.4
ENST00000675250.1
ENST00000540664.6
ENST00000676414.1
ligand dependent nuclear receptor corepressor
chr15_+_100602519 0.05 ENST00000332783.12
ENST00000558747.5
ENST00000343276.4
ankyrin repeat and SOCS box containing 7
chr1_-_217089627 0.05 ENST00000361525.7
estrogen related receptor gamma
chr4_-_98929092 0.05 ENST00000280892.10
ENST00000511644.5
ENST00000504432.5
ENST00000450253.7
ENST00000505992.1
eukaryotic translation initiation factor 4E
chr16_-_66751591 0.05 ENST00000440564.6
ENST00000443351.6
ENST00000566150.5
ENST00000258198.7
dynein cytoplasmic 1 light intermediate chain 2
chr15_-_42457513 0.05 ENST00000565611.5
ENST00000263805.8
zinc finger protein 106
chr5_-_135452318 0.05 ENST00000537858.2
TIFA inhibitor
chr5_-_81751103 0.05 ENST00000514493.5
ENST00000320672.8
ENST00000615665.4
single stranded DNA binding protein 2
chr16_-_56425424 0.04 ENST00000290649.10
autocrine motility factor receptor
chr5_+_153490655 0.04 ENST00000518142.5
ENST00000285900.10
glutamate ionotropic receptor AMPA type subunit 1
chr3_-_53846374 0.04 ENST00000315251.11
choline dehydrogenase
chr14_+_102777461 0.04 ENST00000560371.5
ENST00000347662.8
TNF receptor associated factor 3
chr9_+_74497308 0.04 ENST00000376896.8
RAR related orphan receptor B
chrX_-_110795765 0.04 ENST00000372045.5
ENST00000394797.8
ENST00000372042.6
ENST00000482160.5
ENST00000444321.2
chordin like 1
chr16_-_4847265 0.04 ENST00000591451.5
ENST00000436648.9
ENST00000321919.14
ENST00000588297.5
glyoxylate reductase 1 homolog
chr15_+_33310946 0.04 ENST00000415757.7
ENST00000634891.2
ENST00000389232.9
ENST00000622037.1
ryanodine receptor 3
chr10_+_110919595 0.04 ENST00000369452.9
SHOC2 leucine rich repeat scaffold protein
chr11_-_107018462 0.04 ENST00000526355.7
guanylate cyclase 1 soluble subunit alpha 2
chr9_-_37034261 0.04 ENST00000358127.9
ENST00000377852.7
ENST00000523241.6
paired box 5
chrX_-_54357993 0.04 ENST00000375169.7
ENST00000354646.6
WNK lysine deficient protein kinase 3
chr10_+_86756580 0.04 ENST00000372037.8
bone morphogenetic protein receptor type 1A
chr17_-_44503369 0.03 ENST00000585614.1
ENST00000591680.6
G-patch domain containing 8
chrX_+_17375230 0.03 ENST00000380060.7
NHS actin remodeling regulator
chr6_+_4021293 0.03 ENST00000337659.11
pre-mRNA processing factor 4B
chr1_+_27725945 0.03 ENST00000373954.11
ENST00000419687.6
family with sequence similarity 76 member A
chr15_-_74433942 0.03 ENST00000543145.6
ENST00000261918.9
semaphorin 7A (John Milton Hagen blood group)
chr3_+_196568611 0.03 ENST00000440469.1
ENST00000311630.7
F-box protein 45
chr1_+_42682388 0.03 ENST00000321358.12
ENST00000332220.10
Y-box binding protein 1
chr7_+_114414997 0.03 ENST00000462331.5
ENST00000393491.7
ENST00000403559.8
ENST00000408937.7
ENST00000393498.6
ENST00000393495.7
ENST00000378237.7
forkhead box P2
chr5_+_149730260 0.03 ENST00000360453.8
ENST00000394320.7
ENST00000309241.10
PPARG coactivator 1 beta
chr1_+_21509415 0.03 ENST00000374840.8
ENST00000539907.5
ENST00000540617.5
alkaline phosphatase, biomineralization associated
chr14_+_94026314 0.02 ENST00000203664.10
ENST00000553723.1
OTU deubiquitinase, ubiquitin aldehyde binding 2
chr9_+_15553002 0.02 ENST00000380701.8
coiled-coil domain containing 171
chr8_-_67343768 0.02 ENST00000262215.8
ADP ribosylation factor guanine nucleotide exchange factor 1
chr4_-_141133436 0.02 ENST00000306799.7
ENST00000515673.7
ring finger protein 150
chr10_-_73495966 0.02 ENST00000342558.3
ENST00000360663.10
ENST00000394828.6
ENST00000394829.6
protein phosphatase 3 catalytic subunit beta
chr1_-_112707056 0.02 ENST00000369633.6
ENST00000425265.6
ENST00000369632.6
ENST00000436685.6
ENST00000484054.3
ENST00000369636.6
ENST00000369637.5
ENST00000339083.12
ENST00000285735.6
ENST00000369638.6
ras homolog family member C
chr12_-_48004467 0.02 ENST00000380518.8
collagen type II alpha 1 chain
chr16_-_73048104 0.02 ENST00000268489.10
zinc finger homeobox 3
chr8_-_113377125 0.02 ENST00000343508.7
CUB and Sushi multiple domains 3
chr2_-_153478753 0.02 ENST00000325926.4
reprimo, TP53 dependent G2 arrest mediator homolog
chr1_-_77979054 0.02 ENST00000370768.7
ENST00000370767.5
ENST00000421641.1
far upstream element binding protein 1
chr2_+_46698909 0.02 ENST00000650611.1
ENST00000306503.5
long intergenic non-protein coding RNA 1118
suppressor of cytokine signaling 5
chr3_+_94062974 0.02 ENST00000314622.9
NOP2/Sun RNA methyltransferase 3
chr10_-_86366784 0.02 ENST00000327946.12
glutamate ionotropic receptor delta type subunit 1
chr16_+_9091593 0.02 ENST00000327827.12
chromosome 16 open reading frame 72
chr16_-_68310822 0.01 ENST00000568538.2
ENST00000263997.11
solute carrier family 7 member 6 opposite strand
chr20_+_64164446 0.01 ENST00000328439.6
myelin transcription factor 1
chr1_-_43367956 0.01 ENST00000372458.8
ELOVL fatty acid elongase 1
chr3_+_138187248 0.01 ENST00000538260.5
ENST00000481646.5
ENST00000491704.5
ENST00000469044.6
ENST00000461600.5
ENST00000466749.5
ENST00000358441.6
ENST00000489213.5
armadillo repeat containing 8
chr9_+_121651594 0.01 ENST00000408936.7
DAB2 interacting protein
chr2_+_47783082 0.01 ENST00000614496.4
ENST00000622629.4
ENST00000234420.11
ENST00000616033.4
ENST00000673637.1
mutS homolog 6
chr21_+_20998399 0.01 ENST00000400546.6
neural cell adhesion molecule 2
chr2_-_158456702 0.01 ENST00000409889.1
ENST00000283233.10
coiled-coil domain containing 148
chr1_+_35931076 0.01 ENST00000397828.3
ENST00000373191.9
argonaute RISC catalytic component 3
chr14_-_63045419 0.01 ENST00000322893.12
potassium voltage-gated channel subfamily H member 5
chr11_+_125626229 0.00 ENST00000532449.6
ENST00000534070.5
checkpoint kinase 1
chr12_+_104456962 0.00 ENST00000547956.1
ENST00000549260.5
carbohydrate sulfotransferase 11
chr19_-_45973863 0.00 ENST00000263257.6
NOVA alternative splicing regulator 2
chr3_+_179148341 0.00 ENST00000263967.4
phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha
chr1_-_115338231 0.00 ENST00000369512.3
ENST00000680116.1
ENST00000681124.1
ENST00000675637.2
ENST00000676038.2
nerve growth factor
chr19_+_35269065 0.00 ENST00000595068.5
ENST00000379134.7
ENST00000594064.5
ENST00000598058.1
upstream transcription factor 2, c-fos interacting

Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 GO:0070634 transepithelial ammonium transport(GO:0070634)
0.1 0.5 GO:0072674 multinuclear osteoclast differentiation(GO:0072674) osteoclast fusion(GO:0072675)
0.1 0.2 GO:0032912 negative regulation of transforming growth factor beta2 production(GO:0032912)
0.1 0.2 GO:0072660 maintenance of protein location in membrane(GO:0072658) maintenance of protein location in plasma membrane(GO:0072660) positive regulation of membrane depolarization during cardiac muscle cell action potential(GO:1900827)
0.1 0.2 GO:0060434 bronchus morphogenesis(GO:0060434)
0.0 0.1 GO:1902594 viral penetration into host nucleus(GO:0075732) multi-organism nuclear import(GO:1902594)
0.0 0.1 GO:0002184 cytoplasmic translational termination(GO:0002184)
0.0 0.3 GO:0015014 heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process(GO:0015014)
0.0 0.2 GO:1903347 negative regulation of bicellular tight junction assembly(GO:1903347)
0.0 0.1 GO:0060666 dichotomous subdivision of terminal units involved in salivary gland branching(GO:0060666)
0.0 0.1 GO:1901899 positive regulation of relaxation of cardiac muscle(GO:1901899)
0.0 0.1 GO:0007525 somatic muscle development(GO:0007525)
0.0 0.1 GO:0098904 regulation of AV node cell action potential(GO:0098904)
0.0 0.1 GO:0061300 cerebellum vasculature development(GO:0061300)
0.0 0.1 GO:0050925 negative regulation of negative chemotaxis(GO:0050925)
0.0 0.2 GO:2000324 positive regulation of glucocorticoid receptor signaling pathway(GO:2000324)
0.0 0.2 GO:0001712 ectoderm formation(GO:0001705) ectodermal cell fate commitment(GO:0001712)
0.0 0.4 GO:0008354 germ cell migration(GO:0008354)
0.0 0.2 GO:0051461 positive regulation of corticotropin secretion(GO:0051461)
0.0 0.1 GO:0018125 peptidyl-cysteine methylation(GO:0018125)
0.0 0.1 GO:0030037 actin filament reorganization involved in cell cycle(GO:0030037)
0.0 0.1 GO:1900365 positive regulation of mRNA polyadenylation(GO:1900365)
0.0 0.2 GO:0060385 axonogenesis involved in innervation(GO:0060385)
0.0 0.1 GO:0035616 histone H2B conserved C-terminal lysine deubiquitination(GO:0035616)
0.0 0.0 GO:0071626 mastication(GO:0071626) learned vocalization behavior(GO:0098583)
0.0 0.3 GO:0043508 negative regulation of JUN kinase activity(GO:0043508)
0.0 0.1 GO:0021979 hypothalamus cell differentiation(GO:0021979)
0.0 0.0 GO:0019285 glycine betaine biosynthetic process from choline(GO:0019285) glycine betaine metabolic process(GO:0031455) glycine betaine biosynthetic process(GO:0031456)
0.0 0.1 GO:1900748 positive regulation of vascular endothelial growth factor signaling pathway(GO:1900748)
0.0 0.1 GO:0051045 negative regulation of membrane protein ectodomain proteolysis(GO:0051045)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0018444 translation release factor complex(GO:0018444)
0.0 0.2 GO:0070022 transforming growth factor beta receptor homodimeric complex(GO:0070022)
0.0 0.1 GO:0032937 SREBP-SCAP-Insig complex(GO:0032937)
0.0 0.1 GO:0070381 endosome to plasma membrane transport vesicle(GO:0070381)
0.0 0.2 GO:0051286 cell tip(GO:0051286)
0.0 0.1 GO:0070032 synaptobrevin 2-SNAP-25-syntaxin-1a-complexin I complex(GO:0070032)
0.0 0.1 GO:0002177 manchette(GO:0002177)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.2 0.6 GO:0008511 sodium:potassium:chloride symporter activity(GO:0008511)
0.1 0.3 GO:0050509 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity(GO:0050509)
0.1 0.4 GO:0042392 sphingosine-1-phosphate phosphatase activity(GO:0042392)
0.1 0.3 GO:0051765 inositol tetrakisphosphate kinase activity(GO:0051765)
0.1 0.2 GO:0005026 transforming growth factor beta receptor activity, type II(GO:0005026)
0.0 0.5 GO:0016176 superoxide-generating NADPH oxidase activator activity(GO:0016176)
0.0 0.2 GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity(GO:0015018)
0.0 0.1 GO:0048763 calcium-induced calcium release activity(GO:0048763)
0.0 0.2 GO:0008597 calcium-dependent protein serine/threonine phosphatase regulator activity(GO:0008597)
0.0 0.1 GO:0061649 ubiquitinated histone binding(GO:0061649)
0.0 0.1 GO:0008269 JAK pathway signal transduction adaptor activity(GO:0008269)
0.0 0.1 GO:0003747 translation release factor activity(GO:0003747) translation termination factor activity(GO:0008079)
0.0 0.2 GO:0030911 TPR domain binding(GO:0030911)
0.0 0.4 GO:0032794 GTPase activating protein binding(GO:0032794)
0.0 0.1 GO:0008046 axon guidance receptor activity(GO:0008046)
0.0 0.1 GO:0005250 A-type (transient outward) potassium channel activity(GO:0005250)
0.0 0.2 GO:1990247 N6-methyladenosine-containing RNA binding(GO:1990247)
0.0 0.1 GO:1904929 coreceptor activity involved in Wnt signaling pathway, planar cell polarity pathway(GO:1904929)

Gene overrepresentation in curated gene sets: REACTOME pathways category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.2 REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION Genes involved in Apoptosis induced DNA fragmentation
0.0 0.4 REACTOME HS GAG BIOSYNTHESIS Genes involved in HS-GAG biosynthesis