hg38_v1_chr4_+_122826679_122826708	1.64202	PAX1_PAX9	ENST00000264498.8|FGF2|ENSG00000138685.17|fibroblast growth factor 2
hg38_v1_chr4_+_122826824_122826839	1.59266	PAX1_PAX9	ENST00000608478.1|FGF2|ENSG00000138685.17|fibroblast growth factor 2	ENST00000644866.2|FGF2|ENSG00000138685.17|fibroblast growth factor 2
hg38_v1_chr8_-_124372686_124372711	1.43729	PAX1_PAX9	ENST00000297632.8|TMEM65|ENSG00000164983.8|transmembrane protein 65
hg38_v1_chr9_-_122228845_122228967	1.19396	PAX1_PAX9	ENST00000394319.8|LHX6|ENSG00000106852.15|LIM homeobox 6	ENST00000340587.7|LHX6|ENSG00000106852.15|LIM homeobox 6
hg38_v1_chr6_+_34889228_34889350	0.946352	PAX1_PAX9	ENST00000360359.5|ANKS1A|ENSG00000064999.15|ankyrin repeat and sterile alpha motif domain containing 1A	ENST00000649117.1|ANKS1A|ENSG00000064999.15|ankyrin repeat and sterile alpha motif domain containing 1A	ENST00000650178.1|ANKS1A|ENSG00000064999.15|ankyrin repeat and sterile alpha motif domain containing 1A
hg38_v1_chr2_+_68643579_68643579	0.649201	PAX1_PAX9	ENST00000303786.5|PROKR1|ENSG00000169618.7|prokineticin receptor 1
hg38_v1_chr5_-_134411847_134411931	0.560919	PAX1_PAX9	ENST00000458198.3|CDKN2AIPNL|ENSG00000237190.4|CDKN2A interacting protein N-terminal like	ENST00000395009.3|CDKN2AIPNL|ENSG00000237190.4|CDKN2A interacting protein N-terminal like
hg38_v1_chr10_+_30434176_30434244	0.45519	PAX1_PAX9	ENST00000263056.6|MAP3K8|ENSG00000107968.10|mitogen-activated protein kinase kinase kinase 8	ENST00000375322.2|MAP3K8|ENSG00000107968.10|mitogen-activated protein kinase kinase kinase 8
hg38_v1_chr4_-_162163955_162163966	0.439004	PAX1_PAX9	ENST00000379164.8|FSTL5|ENSG00000168843.14|follistatin like 5
hg38_v1_chr10_+_30434021_30434041	0.43329	PAX1_PAX9	ENST00000542547.5|MAP3K8|ENSG00000107968.10|mitogen-activated protein kinase kinase kinase 8
hg38_v1_chr17_+_78378633_78378678	0.432655	PAX1_PAX9	ENST00000262764.11|PGS1|ENSG00000087157.19|phosphatidylglycerophosphate synthase 1	ENST00000589689.5|PGS1|ENSG00000087157.19|phosphatidylglycerophosphate synthase 1	ENST00000592043.5|PGS1|ENSG00000087157.19|phosphatidylglycerophosphate synthase 1	ENST00000587356.1|PGS1|ENSG00000087157.19|phosphatidylglycerophosphate synthase 1
hg38_v1_chr4_-_162163989_162164010	0.430829	PAX1_PAX9	ENST00000306100.10|FSTL5|ENSG00000168843.14|follistatin like 5	ENST00000427802.2|FSTL5|ENSG00000168843.14|follistatin like 5
hg38_v1_chr13_+_20567131_20567210	0.32608	PAX1_PAX9	ENST00000319980.10|IFT88|ENSG00000032742.18|intraflagellar transport 88	ENST00000351808.10|IFT88|ENSG00000032742.18|intraflagellar transport 88	ENST00000389373.3|IFT88|ENSG00000032742.18|intraflagellar transport 88
hg38_v1_chr6_+_132570322_132570322	0.32367	PAX1_PAX9	ENST00000275198.1|TAAR6|ENSG00000146383.7|trace amine associated receptor 6
hg38_v1_chr17_-_41812586_41812630	0.308437	PAX1_PAX9	ENST00000355468.7|P3H4|ENSG00000141696.13|prolyl 3-hydroxylase family member 4 (inactive)	ENST00000590496.1|P3H4|ENSG00000141696.13|prolyl 3-hydroxylase family member 4 (inactive)
hg38_v1_chr10_+_71319249_71319290	0.301108	PAX1_PAX9	ENST00000373189.6|SLC29A3|ENSG00000198246.9|solute carrier family 29 member 3	ENST00000479577.2|SLC29A3|ENSG00000198246.9|solute carrier family 29 member 3
hg38_v1_chr15_+_63277586_63277625	0.296548	PAX1_PAX9	ENST00000261879.10|APH1B|ENSG00000138613.14|aph-1 homolog B, gamma-secretase subunit	ENST00000380343.8|APH1B|ENSG00000138613.14|aph-1 homolog B, gamma-secretase subunit	ENST00000560353.1|APH1B|ENSG00000138613.14|aph-1 homolog B, gamma-secretase subunit
hg38_v1_chr6_-_137173644_137173648	0.27671	PAX1_PAX9	ENST00000296980.7|IL22RA2|ENSG00000164485.15|interleukin 22 receptor subunit alpha 2	ENST00000349184.8|IL22RA2|ENSG00000164485.15|interleukin 22 receptor subunit alpha 2	ENST00000339602.3|IL22RA2|ENSG00000164485.15|interleukin 22 receptor subunit alpha 2
hg38_v1_chr1_-_204196482_204196498	0.248422	PAX1_PAX9	ENST00000367194.5|KISS1|ENSG00000170498.9|KiSS-1 metastasis suppressor
hg38_v1_chr2_-_162074394_162074405	0.246863	PAX1_PAX9	ENST00000676810.1|DPP4|ENSG00000197635.11|dipeptidyl peptidase 4
hg38_v1_chr4_+_625555_625617	0.219418	PAX1_PAX9	ENST00000496514.6|PDE6B|ENSG00000133256.13|phosphodiesterase 6B	ENST00000255622.10|PDE6B|ENSG00000133256.13|phosphodiesterase 6B
hg38_v1_chr2_-_162074182_162074245	0.217502	PAX1_PAX9	ENST00000360534.8|DPP4|ENSG00000197635.11|dipeptidyl peptidase 4
hg38_v1_chr11_-_126268913_126268982	0.214875	PAX1_PAX9	ENST00000532259.1|SRPRA|ENSG00000182934.12|SRP receptor subunit alpha
hg38_v1_chr2_-_206765274_206765337	0.213051	PAX1_PAX9	ENST00000454776.6|MDH1B|ENSG00000138400.13|malate dehydrogenase 1B	ENST00000449792.5|MDH1B|ENSG00000138400.13|malate dehydrogenase 1B	ENST00000374412.8|MDH1B|ENSG00000138400.13|malate dehydrogenase 1B
hg38_v1_chr3_-_57079287_57079313	0.201447	PAX1_PAX9	ENST00000338458.8|ARHGEF3|ENSG00000163947.12|Rho guanine nucleotide exchange factor 3	ENST00000468727.5|ARHGEF3|ENSG00000163947.12|Rho guanine nucleotide exchange factor 3
hg38_v1_chr3_+_195720974_195720995	0.186141	PAX1_PAX9	ENST00000447234.7|MUC20|ENSG00000176945.17|mucin 20, cell surface associated	ENST00000320736.10|MUC20|ENSG00000176945.17|mucin 20, cell surface associated
hg38_v1_chr19_-_51645545_51645545	0.175726	PAX1_PAX9	ENST00000534261.3|SIGLEC5|ENSG00000105501.12|sialic acid binding Ig like lectin 5
hg38_v1_chr3_+_15206179_15206287	0.146772	PAX1_PAX9	ENST00000253693.7|CAPN7|ENSG00000131375.10|calpain 7
hg38_v1_chr18_-_49491586_49491840	0.138264	PAX1_PAX9	ENST00000584895.5|RPL17-C18orf32|ENSG00000215472.10|RPL17-C18orf32 readthrough	ENST00000580210.5|RPL17|ENSG00000265681.8|ribosomal protein L17	ENST00000579408.5|RPL17|ENSG00000265681.8|ribosomal protein L17
hg38_v1_chr11_+_6926417_6926465	0.133487	PAX1_PAX9	ENST00000610573.4|ZNF215|ENSG00000149054.16|zinc finger protein 215	ENST00000278319.10|ZNF215|ENSG00000149054.16|zinc finger protein 215
hg38_v1_chr17_+_41812974_41813013	0.132869	PAX1_PAX9	ENST00000321562.9|FKBP10|ENSG00000141756.19|FKBP prolyl isomerase 10
hg38_v1_chr17_-_3557798_3557832	0.130078	PAX1_PAX9	ENST00000301365.8|TRPV3|ENSG00000167723.15|transient receptor potential cation channel subfamily V member 3	ENST00000572519.1|TRPV3|ENSG00000167723.15|transient receptor potential cation channel subfamily V member 3	ENST00000576742.6|TRPV3|ENSG00000167723.15|transient receptor potential cation channel subfamily V member 3
hg38_v1_chr14_+_24070837_24070923	0.123653	PAX1_PAX9	ENST00000537691.5|CPNE6|ENSG00000100884.9|copine 6	ENST00000397016.6|CPNE6|ENSG00000100884.9|copine 6	ENST00000560356.5|CPNE6|ENSG00000100884.9|copine 6	ENST00000558450.5|CPNE6|ENSG00000100884.9|copine 6
hg38_v1_chrX_+_149781930_149781930	0.12307	PAX1_PAX9	ENST00000243314.5|MAGEA9|ENSG00000123584.7|MAGE family member A9
hg38_v1_chr9_-_101487120_101487187	0.120231	PAX1_PAX9	ENST00000374848.8|PGAP4|ENSG00000165152.9|post-GPI attachment to proteins GalNAc transferase 4
hg38_v1_chr2_-_162074050_162074102	0.114841	PAX1_PAX9	ENST00000676768.1|DPP4|ENSG00000197635.11|dipeptidyl peptidase 4
hg38_v1_chr22_+_22895368_22895394	0.104699	PAX1_PAX9	ENST00000390321.2|IGLC1|ENSG00000211675.2|immunoglobulin lambda constant 1
hg38_v1_chr3_+_195720867_195720890	0.104366	PAX1_PAX9	ENST00000436408.6|MUC20|ENSG00000176945.17|mucin 20, cell surface associated
hg38_v1_chr11_+_61755372_61755403	0.0962801	PAX1_PAX9	ENST00000265460.9|MYRF|ENSG00000124920.14|myelin regulatory factor
hg38_v1_chr7_-_113118544_113118564	0.0917399	PAX1_PAX9	ENST00000397764.8|SMIM30|ENSG00000214194.9|small integral membrane protein 30	ENST00000441359.1|SMIM30|ENSG00000214194.9|small integral membrane protein 30
hg38_v1_chr11_+_6926490_6926572	0.0785291	PAX1_PAX9	ENST00000414517.6|ZNF215|ENSG00000149054.16|zinc finger protein 215
hg38_v1_chrX_-_149540900_149540932	0.0761438	PAX1_PAX9	ENST00000608355.1|LINC00893|ENSG00000241769.7|long intergenic non-protein coding RNA 893	ENST00000651111.1|ENSG00000241489.8|ENSG00000241489.8|novel protein
hg38_v1_chr17_+_39200302_39200327	0.0659872	PAX1_PAX9	ENST00000579374.5|RPL19|ENSG00000108298.12|ribosomal protein L19
hg38_v1_chr1_-_1574824_1574888	0.0654987	PAX1_PAX9	ENST00000291386.4|SSU72|ENSG00000160075.12|SSU72 homolog, RNA polymerase II CTD phosphatase
hg38_v1_chrX_-_154479253_154479291	0.0650014	PAX1_PAX9	ENST00000357360.4|LAGE3|ENSG00000196976.7|L antigen family member 3
hg38_v1_chr17_+_39200275_39200294	0.0629246	PAX1_PAX9	ENST00000225430.9|RPL19|ENSG00000108298.12|ribosomal protein L19
hg38_v1_chr3_-_25783434_25783498	0.0623635	PAX1_PAX9	ENST00000396649.7|NGLY1|ENSG00000151092.18|N-glycanase 1	ENST00000280700.10|NGLY1|ENSG00000151092.18|N-glycanase 1	ENST00000428257.5|NGLY1|ENSG00000151092.18|N-glycanase 1
hg38_v1_chr8_-_120811988_120812087	0.0571789	PAX1_PAX9	ENST00000517992.2|SNTB1|ENSG00000172164.15|syntrophin beta 1
hg38_v1_chr3_-_25783381_25783424	0.0561897	PAX1_PAX9	ENST00000308710.9|NGLY1|ENSG00000151092.18|N-glycanase 1	ENST00000676225.1|NGLY1|ENSG00000151092.18|N-glycanase 1
hg38_v1_chr14_-_91417805_91417890	0.0518681	PAX1_PAX9	ENST00000389857.11|CCDC88C|ENSG00000015133.19|coiled-coil domain containing 88C	ENST00000553403.1|CCDC88C|ENSG00000015133.19|coiled-coil domain containing 88C
hg38_v1_chr17_+_39200334_39200357	0.048145	PAX1_PAX9	ENST00000579260.5|RPL19|ENSG00000108298.12|ribosomal protein L19	ENST00000582193.5|RPL19|ENSG00000108298.12|ribosomal protein L19
hg38_v1_chr2_+_241809065_241809141	0.0422758	PAX1_PAX9	ENST00000415936.5|NEU4|ENSG00000204099.12|neuraminidase 4
hg38_v1_chr6_-_137044959_137044973	0.0319927	PAX1_PAX9	ENST00000468393.5|IL20RA|ENSG00000016402.14|interleukin 20 receptor subunit alpha	ENST00000367746.3|IL20RA|ENSG00000016402.14|interleukin 20 receptor subunit alpha	ENST00000316649.10|IL20RA|ENSG00000016402.14|interleukin 20 receptor subunit alpha
hg38_v1_chr2_+_27212320_27212372	0.0303094	PAX1_PAX9	ENST00000405489.7|ATRAID|ENSG00000138085.17|all-trans retinoic acid induced differentiation factor
hg38_v1_chr18_-_49492305_49492526	0.0301118	PAX1_PAX9	ENST00000615479.4|RPL17|ENSG00000265681.8|ribosomal protein L17	ENST00000583637.5|RPL17|ENSG00000265681.8|ribosomal protein L17	ENST00000618613.5|RPL17|ENSG00000265681.8|ribosomal protein L17	ENST00000615760.4|RPL17|ENSG00000265681.8|ribosomal protein L17	ENST00000578528.1|RPL17|ENSG00000265681.8|ribosomal protein L17	ENST00000578532.5|RPL17|ENSG00000265681.8|ribosomal protein L17	ENST00000580387.5|RPL17|ENSG00000265681.8|ribosomal protein L17	ENST00000579248.5|RPL17|ENSG00000265681.8|ribosomal protein L17	ENST00000580261.6|RPL17|ENSG00000265681.8|ribosomal protein L17	ENST00000332968.11|RPL17-C18orf32|ENSG00000215472.10|RPL17-C18orf32 readthrough	ENST00000581373.5|RPL17|ENSG00000265681.8|ribosomal protein L17	ENST00000618619.4|RPL17|ENSG00000265681.8|ribosomal protein L17	ENST00000617346.4|RPL17|ENSG00000265681.8|ribosomal protein L17	ENST00000583036.5|RPL17|ENSG00000265681.8|ribosomal protein L17
hg38_v1_chr6_-_170584581_170584652	0.0257958	PAX1_PAX9	ENST00000392090.6|PDCD2|ENSG00000071994.11|programmed cell death 2	ENST00000542896.5|PDCD2|ENSG00000071994.11|programmed cell death 2	ENST00000453163.6|PDCD2|ENSG00000071994.11|programmed cell death 2	ENST00000537445.5|PDCD2|ENSG00000071994.11|programmed cell death 2	ENST00000541970.6|PDCD2|ENSG00000071994.11|programmed cell death 2
hg38_v1_chr17_+_39200507_39200588	0.0254405	PAX1_PAX9	ENST00000678573.1|RPL19|ENSG00000108298.12|ribosomal protein L19
hg38_v1_chr1_+_160151597_160151608	0.0240138	PAX1_PAX9	ENST00000368081.9|ATP1A4|ENSG00000132681.17|ATPase Na+/K+ transporting subunit alpha 4
hg38_v1_chr1_+_44674688_44674727	0.0053901	PAX1_PAX9	ENST00000418644.5|ARMH1|ENSG00000198520.12|armadillo like helical domain containing 1	ENST00000458657.6|ARMH1|ENSG00000198520.12|armadillo like helical domain containing 1	ENST00000535358.6|ARMH1|ENSG00000198520.12|armadillo like helical domain containing 1	ENST00000441519.5|ARMH1|ENSG00000198520.12|armadillo like helical domain containing 1	ENST00000445071.5|ARMH1|ENSG00000198520.12|armadillo like helical domain containing 1
hg38_v1_chr6_-_41734160_41734199	0.00366721	PAX1_PAX9	ENST00000424495.2|TFEB|ENSG00000112561.19|transcription factor EB	ENST00000420312.6|TFEB|ENSG00000112561.19|transcription factor EB
hg38_v1_chr14_+_64388296_64388371	0.00182489	PAX1_PAX9	ENST00000554739.5|MTHFD1|ENSG00000100714.17|methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1	ENST00000554768.6|MTHFD1|ENSG00000100714.17|methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1	ENST00000652179.1|MTHFD1|ENSG00000100714.17|methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1	ENST00000652337.1|MTHFD1|ENSG00000100714.17|methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1	ENST00000557370.3|MTHFD1|ENSG00000100714.17|methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1
