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Illumina Body Map 2 (GSE30611)

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Results for AACCUGG

Z-value: 0.15

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miRNA associated with seed AACCUGG

NamemiRBASE accession
hsa-miR-490-3p
MIMAT0002806

Activity profile of AACCUGG motif

Sorted Z-values of AACCUGG motif

Top targets:  

Promoter Log-likelihood Transcript Gene Gene Info
chr18_+_57435366 0.20 ENST00000491143.3
ONECUT2
one cut homeobox 2
chr5_+_109689915 0.14 ENST00000261483.5
MAN2A1
mannosidase alpha class 2A member 1
chr4_+_183099244 0.13 ENST00000403733.8
WWC2
WW and C2 domain containing 2
chr7_-_140176970 0.12 ENST00000397560.7
KDM7A
lysine demethylase 7A
chr11_-_115504389 0.10 ENST00000545380.5
ENST00000452722.7
ENST00000331581.11
ENST00000537058.5
ENST00000536727.5
ENST00000542447.6
CADM1
cell adhesion molecule 1
chr6_-_90296824 0.08 ENST00000257749.9
BACH2
BTB domain and CNC homolog 2
chr2_+_170715317 0.08 ENST00000375281.4
SP5
Sp5 transcription factor
chr3_-_190120881 0.08 ENST00000319332.10
P3H2
prolyl 3-hydroxylase 2
chr4_-_112516176 0.07 ENST00000313341.4
NEUROG2
neurogenin 2
chrX_+_123961304 0.07 ENST00000371160.5
ENST00000435103.5
STAG2
stromal antigen 2
chr11_+_125592826 0.07 ENST00000529196.5
ENST00000392708.9
ENST00000649491.1
ENST00000531491.5
STT3A
STT3 oligosaccharyltransferase complex catalytic subunit A
chr16_+_1153202 0.06 ENST00000358590.8
ENST00000638323.1
CACNA1H
calcium voltage-gated channel subunit alpha1 H
chr6_+_11537738 0.06 ENST00000379426.2
TMEM170B
transmembrane protein 170B
chr1_+_93345893 0.05 ENST00000370272.9
ENST00000370267.1
DR1
down-regulator of transcription 1
chr8_-_138497254 0.05 ENST00000395297.6
FAM135B
family with sequence similarity 135 member B
chr7_+_77537258 0.05 ENST00000248594.11
PTPN12
protein tyrosine phosphatase non-receptor type 12
chr7_+_101154445 0.05 ENST00000337619.11
ENST00000429457.1
AP1S1
adaptor related protein complex 1 subunit sigma 1
chr19_+_4007714 0.05 ENST00000262971.3
PIAS4
protein inhibitor of activated STAT 4
chr9_-_121201836 0.05 ENST00000373840.9
RAB14
RAB14, member RAS oncogene family
chr8_-_102864155 0.05 ENST00000682725.1
ENST00000337198.10
ENST00000681985.1
ENST00000684566.1
ENST00000683787.1
ENST00000682014.1
ENST00000682969.1
ENST00000684721.1
ENST00000347770.8
AZIN1
antizyme inhibitor 1
chr9_-_38069220 0.04 ENST00000377707.4
SHB
SH2 domain containing adaptor protein B
chr11_+_63938971 0.04 ENST00000539656.5
ENST00000377793.9
NAA40
N-alpha-acetyltransferase 40, NatD catalytic subunit
chrX_-_130268883 0.04 ENST00000447817.1
ENST00000370978.9
ZNF280C
zinc finger protein 280C
chr4_+_70902326 0.03 ENST00000502869.5
ENST00000309395.7
ENST00000396051.2
MOB1B
MOB kinase activator 1B
chr4_+_48341505 0.03 ENST00000264313.11
SLAIN2
SLAIN motif family member 2
chr8_+_41578176 0.03 ENST00000396987.7
ENST00000519853.5
GPAT4
glycerol-3-phosphate acyltransferase 4
chr15_+_51829644 0.03 ENST00000308580.12
TMOD3
tropomodulin 3
chr8_-_67343768 0.03 ENST00000262215.8
ARFGEF1
ADP ribosylation factor guanine nucleotide exchange factor 1
chr7_-_139777986 0.03 ENST00000406875.8
HIPK2
homeodomain interacting protein kinase 2
chr2_+_177212724 0.02 ENST00000677043.1
ENST00000677863.1
ENST00000676681.1
ENST00000678111.1
ENST00000676874.1
ENST00000676736.1
ENST00000411529.6
ENST00000435711.5
HNRNPA3
heterogeneous nuclear ribonucleoprotein A3
chr17_-_29294141 0.02 ENST00000225388.9
NUFIP2
nuclear FMR1 interacting protein 2
chr12_+_67269328 0.02 ENST00000545606.6
CAND1
cullin associated and neddylation dissociated 1
chr2_+_148021001 0.02 ENST00000407073.5
MBD5
methyl-CpG binding domain protein 5
chr19_+_42284483 0.01 ENST00000575354.6
CIC
capicua transcriptional repressor
chrX_+_10015226 0.01 ENST00000380861.9
WWC3
WWC family member 3
chr17_-_50707855 0.01 ENST00000285243.7
ANKRD40
ankyrin repeat domain 40
chr17_-_73232218 0.01 ENST00000583024.1
ENST00000403627.7
ENST00000405159.7
ENST00000581110.1
FAM104A
family with sequence similarity 104 member A
chr15_-_26773022 0.00 ENST00000311550.10
ENST00000622697.4
GABRB3
gamma-aminobutyric acid type A receptor subunit beta3
chr6_-_87702221 0.00 ENST00000257787.6
AKIRIN2
akirin 2
chr17_+_32350132 0.00 ENST00000321233.10
ENST00000394673.6
ENST00000394670.9
ENST00000579634.5
ENST00000580759.5
ENST00000342555.10
ENST00000577908.5
ENST00000394679.9
ENST00000582165.1
ZNF207
zinc finger protein 207

Network of associatons between targets according to the STRING database.

First level regulatory network of AACCUGG

PNG image of the network

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Gene Ontology Analysis

Gene overrepresentation in biological process category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0035574 histone H4-K20 demethylation(GO:0035574)
0.0 0.1 GO:0043686 co-translational protein modification(GO:0043686)
0.0 0.1 GO:0006013 mannose metabolic process(GO:0006013)
0.0 0.0 GO:1902269 positive regulation of polyamine transmembrane transport(GO:1902269)
0.0 0.1 GO:0042271 susceptibility to natural killer cell mediated cytotoxicity(GO:0042271)

Gene overrepresentation in cellular component category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0005797 Golgi medial cisterna(GO:0005797)

Gene overrepresentation in molecular function category:

Log-likelihood per target  Total log-likelihood Term Description
0.0 0.1 GO:0004572 mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity(GO:0004572)
0.0 0.1 GO:0035575 histone demethylase activity (H4-K20 specific)(GO:0035575)
0.0 0.1 GO:0019797 procollagen-proline 3-dioxygenase activity(GO:0019797)
0.0 0.1 GO:0008332 low voltage-gated calcium channel activity(GO:0008332)