Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
ATF4 | hg38_v1_chr22_+_39520553_39520604 | 0.23 | 2.1e-01 | Click! |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.6 | 13.2 | GO:0006751 | glutathione catabolic process(GO:0006751) |
0.1 | 6.8 | GO:0071542 | dopaminergic neuron differentiation(GO:0071542) |
0.7 | 6.7 | GO:0055129 | L-proline biosynthetic process(GO:0055129) |
0.7 | 6.1 | GO:0071279 | cellular response to cobalt ion(GO:0071279) |
0.3 | 5.3 | GO:0006564 | L-serine biosynthetic process(GO:0006564) |
0.2 | 5.2 | GO:2000194 | regulation of female gonad development(GO:2000194) |
0.7 | 5.0 | GO:0051012 | microtubule sliding(GO:0051012) |
1.4 | 4.3 | GO:0018963 | phthalate metabolic process(GO:0018963) |
0.1 | 3.7 | GO:0006783 | heme biosynthetic process(GO:0006783) |
0.5 | 3.6 | GO:0006651 | diacylglycerol biosynthetic process(GO:0006651) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 13.2 | GO:0005802 | trans-Golgi network(GO:0005802) |
0.0 | 7.6 | GO:0005759 | mitochondrial matrix(GO:0005759) |
0.3 | 6.1 | GO:0043203 | axon hillock(GO:0043203) |
0.0 | 5.0 | GO:0072686 | mitotic spindle(GO:0072686) |
0.4 | 4.3 | GO:0030061 | mitochondrial crista(GO:0030061) |
0.0 | 4.0 | GO:0032993 | protein-DNA complex(GO:0032993) |
0.0 | 2.9 | GO:1904115 | axon cytoplasm(GO:1904115) |
0.0 | 2.8 | GO:0043679 | axon terminus(GO:0043679) |
0.0 | 2.5 | GO:0005882 | intermediate filament(GO:0005882) |
0.1 | 2.1 | GO:0030014 | CCR4-NOT complex(GO:0030014) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
2.6 | 13.2 | GO:0003839 | gamma-glutamylcyclotransferase activity(GO:0003839) |
1.0 | 7.6 | GO:0004735 | pyrroline-5-carboxylate reductase activity(GO:0004735) |
0.0 | 6.4 | GO:0008017 | microtubule binding(GO:0008017) |
0.0 | 6.1 | GO:0004867 | serine-type endopeptidase inhibitor activity(GO:0004867) |
0.0 | 6.0 | GO:0008083 | growth factor activity(GO:0008083) |
0.1 | 4.3 | GO:0017127 | cholesterol transporter activity(GO:0017127) |
0.1 | 3.8 | GO:0004435 | phosphatidylinositol phospholipase C activity(GO:0004435) |
0.1 | 3.6 | GO:0008301 | DNA binding, bending(GO:0008301) |
0.0 | 3.4 | GO:0001205 | transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding(GO:0001205) |
0.0 | 2.9 | GO:0003777 | microtubule motor activity(GO:0003777) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 3.6 | PID RAS PATHWAY | Regulation of Ras family activation |
0.0 | 3.5 | ST FAS SIGNALING PATHWAY | Fas Signaling Pathway |
0.0 | 1.5 | PID CASPASE PATHWAY | Caspase cascade in apoptosis |
0.0 | 1.4 | PID MYC ACTIV PATHWAY | Validated targets of C-MYC transcriptional activation |
0.0 | 1.3 | PID NFAT TFPATHWAY | Calcineurin-regulated NFAT-dependent transcription in lymphocytes |
0.0 | 1.1 | PID P38 ALPHA BETA DOWNSTREAM PATHWAY | Signaling mediated by p38-alpha and p38-beta |
0.0 | 1.0 | PID RHOA PATHWAY | RhoA signaling pathway |
0.0 | 0.6 | PID CD40 PATHWAY | CD40/CD40L signaling |
0.0 | 0.5 | PID MYC PATHWAY | C-MYC pathway |
0.0 | 0.1 | SA CASPASE CASCADE | Apoptosis is mediated by caspases, cysteine proteases arranged in a proteolytic cascade. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.5 | 15.4 | REACTOME AMINO ACID SYNTHESIS AND INTERCONVERSION TRANSAMINATION | Genes involved in Amino acid synthesis and interconversion (transamination) |
0.1 | 4.3 | REACTOME STEROID HORMONES | Genes involved in Steroid hormones |
0.0 | 2.1 | REACTOME DEADENYLATION OF MRNA | Genes involved in Deadenylation of mRNA |
0.0 | 2.1 | REACTOME INWARDLY RECTIFYING K CHANNELS | Genes involved in Inwardly rectifying K+ channels |
0.0 | 1.5 | REACTOME CASPASE MEDIATED CLEAVAGE OF CYTOSKELETAL PROTEINS | Genes involved in Caspase-mediated cleavage of cytoskeletal proteins |
0.0 | 1.4 | REACTOME SULFUR AMINO ACID METABOLISM | Genes involved in Sulfur amino acid metabolism |
0.1 | 1.1 | REACTOME ACTIVATION OF CHAPERONE GENES BY ATF6 ALPHA | Genes involved in Activation of Chaperone Genes by ATF6-alpha |
0.0 | 1.0 | REACTOME TGF BETA RECEPTOR SIGNALING IN EMT EPITHELIAL TO MESENCHYMAL TRANSITION | Genes involved in TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition) |
0.0 | 1.0 | REACTOME SYNTHESIS OF PA | Genes involved in Synthesis of PA |
0.0 | 0.6 | REACTOME NOREPINEPHRINE NEUROTRANSMITTER RELEASE CYCLE | Genes involved in Norepinephrine Neurotransmitter Release Cycle |