Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
CDC5L | hg38_v1_chr6_+_44387686_44387730 | -0.11 | 5.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr4_+_154563003 Show fit | 10.90 |
ENST00000302068.9
ENST00000509493.1 |
fibrinogen beta chain |
|
chr10_-_67838173 Show fit | 6.82 |
ENST00000225171.7
|
DnaJ heat shock protein family (Hsp40) member C12 |
|
chr10_-_67838019 Show fit | 6.11 |
ENST00000483798.6
|
DnaJ heat shock protein family (Hsp40) member C12 |
|
chr16_-_71577082 Show fit | 4.74 |
ENST00000355962.5
|
tyrosine aminotransferase |
|
chr17_-_66229380 Show fit | 4.36 |
ENST00000205948.11
|
apolipoprotein H |
|
chr3_-_120647018 Show fit | 4.13 |
ENST00000475447.2
|
homogentisate 1,2-dioxygenase |
|
chr10_-_67838091 Show fit | 4.11 |
ENST00000339758.7
|
DnaJ heat shock protein family (Hsp40) member C12 |
|
chr10_+_94938649 Show fit | 3.88 |
ENST00000461906.1
ENST00000260682.8 |
cytochrome P450 family 2 subfamily C member 9 |
|
chr3_+_151814102 Show fit | 3.75 |
ENST00000232892.12
|
arylacetamide deacetylase |
|
chr3_-_194351290 Show fit | 3.72 |
ENST00000429275.1
ENST00000323830.4 |
carboxypeptidase N subunit 2 |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 10.9 | GO:0043152 | induction of bacterial agglutination(GO:0043152) |
0.9 | 8.9 | GO:0006572 | tyrosine catabolic process(GO:0006572) |
0.5 | 7.3 | GO:0010898 | positive regulation of triglyceride catabolic process(GO:0010898) |
0.0 | 6.8 | GO:0050911 | detection of chemical stimulus involved in sensory perception of smell(GO:0050911) |
0.7 | 5.1 | GO:0016098 | monoterpenoid metabolic process(GO:0016098) |
0.5 | 4.8 | GO:0007598 | blood coagulation, extrinsic pathway(GO:0007598) |
0.9 | 4.4 | GO:0090290 | positive regulation of osteoclast proliferation(GO:0090290) |
0.4 | 4.4 | GO:0051918 | negative regulation of fibrinolysis(GO:0051918) |
0.0 | 4.2 | GO:0050821 | protein stabilization(GO:0050821) |
0.7 | 4.0 | GO:0001079 | nitrogen catabolite regulation of transcription from RNA polymerase II promoter(GO:0001079) nitrogen catabolite activation of transcription from RNA polymerase II promoter(GO:0001080) regulation of urea metabolic process(GO:0034255) intracellular bile acid receptor signaling pathway(GO:0038185) interleukin-17 secretion(GO:0072615) nitrogen catabolite regulation of transcription(GO:0090293) nitrogen catabolite activation of transcription(GO:0090294) regulation of nitrogen cycle metabolic process(GO:1903314) positive regulation of glutamate metabolic process(GO:2000213) regulation of ammonia assimilation cycle(GO:2001248) positive regulation of ammonia assimilation cycle(GO:2001250) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.8 | 10.9 | GO:0005577 | fibrinogen complex(GO:0005577) |
0.0 | 8.8 | GO:0005875 | microtubule associated complex(GO:0005875) |
0.0 | 7.9 | GO:0005759 | mitochondrial matrix(GO:0005759) |
0.0 | 7.2 | GO:0008076 | voltage-gated potassium channel complex(GO:0008076) |
0.0 | 5.9 | GO:0016324 | apical plasma membrane(GO:0016324) |
0.2 | 5.4 | GO:0031089 | platelet dense granule lumen(GO:0031089) |
0.0 | 5.2 | GO:0005788 | endoplasmic reticulum lumen(GO:0005788) |
0.1 | 4.1 | GO:0005916 | fascia adherens(GO:0005916) |
0.1 | 4.0 | GO:0005782 | peroxisomal matrix(GO:0005782) microbody lumen(GO:0031907) |
0.5 | 3.8 | GO:0044279 | other organism cell membrane(GO:0044218) other organism membrane(GO:0044279) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.1 | 11.0 | GO:0051087 | chaperone binding(GO:0051087) |
0.2 | 8.6 | GO:0004806 | triglyceride lipase activity(GO:0004806) |
0.0 | 6.1 | GO:0004984 | olfactory receptor activity(GO:0004984) |
1.6 | 4.7 | GO:0080130 | L-phenylalanine:2-oxoglutarate aminotransferase activity(GO:0080130) |
0.7 | 4.4 | GO:0060230 | lipoprotein lipase activator activity(GO:0060230) |
0.1 | 4.4 | GO:0048018 | receptor agonist activity(GO:0048018) |
1.4 | 4.1 | GO:0004411 | homogentisate 1,2-dioxygenase activity(GO:0004411) |
0.2 | 4.1 | GO:0008191 | metalloendopeptidase inhibitor activity(GO:0008191) |
0.7 | 4.0 | GO:1902122 | chenodeoxycholic acid binding(GO:1902122) |
0.8 | 3.9 | GO:0034875 | oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor(GO:0033695) caffeine oxidase activity(GO:0034875) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 15.6 | PID UPA UPAR PATHWAY | Urokinase-type plasminogen activator (uPA) and uPAR-mediated signaling |
0.0 | 12.8 | NABA ECM REGULATORS | Genes encoding enzymes and their regulators involved in the remodeling of the extracellular matrix |
0.1 | 6.5 | PID HNF3B PATHWAY | FOXA2 and FOXA3 transcription factor networks |
0.0 | 6.0 | NABA ECM AFFILIATED | Genes encoding proteins affiliated structurally or functionally to extracellular matrix proteins |
0.1 | 3.4 | PID ERBB NETWORK PATHWAY | ErbB receptor signaling network |
0.0 | 3.1 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 2.8 | PID RXR VDR PATHWAY | RXR and RAR heterodimerization with other nuclear receptor |
0.0 | 2.7 | PID PS1 PATHWAY | Presenilin action in Notch and Wnt signaling |
0.0 | 2.0 | PID ERBB1 DOWNSTREAM PATHWAY | ErbB1 downstream signaling |
0.0 | 1.7 | ST DIFFERENTIATION PATHWAY IN PC12 CELLS | Differentiation Pathway in PC12 Cells; this is a specific case of PAC1 Receptor Pathway. |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 12.0 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.6 | 11.1 | REACTOME COMMON PATHWAY | Genes involved in Common Pathway |
0.0 | 5.6 | REACTOME OLFACTORY SIGNALING PATHWAY | Genes involved in Olfactory Signaling Pathway |
0.3 | 5.1 | REACTOME XENOBIOTICS | Genes involved in Xenobiotics |
0.4 | 4.8 | REACTOME GAMMA CARBOXYLATION TRANSPORT AND AMINO TERMINAL CLEAVAGE OF PROTEINS | Genes involved in Gamma-carboxylation, transport, and amino-terminal cleavage of proteins |
0.3 | 4.6 | REACTOME RECYCLING OF BILE ACIDS AND SALTS | Genes involved in Recycling of bile acids and salts |
0.1 | 4.4 | REACTOME INTERACTION BETWEEN L1 AND ANKYRINS | Genes involved in Interaction between L1 and Ankyrins |
0.1 | 3.7 | REACTOME GLUTATHIONE CONJUGATION | Genes involved in Glutathione conjugation |
0.1 | 3.6 | REACTOME REGULATION OF INSULIN LIKE GROWTH FACTOR IGF ACTIVITY BY INSULIN LIKE GROWTH FACTOR BINDING PROTEINS IGFBPS | Genes involved in Regulation of Insulin-like Growth Factor (IGF) Activity by Insulin-like Growth Factor Binding Proteins (IGFBPs) |
0.1 | 3.4 | REACTOME DOWNREGULATION OF ERBB2 ERBB3 SIGNALING | Genes involved in Downregulation of ERBB2:ERBB3 signaling |