Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
DLX1 | hg38_v1_chr2_+_172085499_172085536 | 0.67 | 2.6e-05 | Click! |
BARX2 | hg38_v1_chr11_+_129375841_129375863 | 0.33 | 6.4e-02 | Click! |
HOXA3 | hg38_v1_chr7_-_27152561_27152598 | -0.22 | 2.3e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr11_-_13496018 Show fit | 4.00 |
ENST00000529816.1
|
parathyroid hormone |
|
chr10_-_49762276 Show fit | 3.62 |
ENST00000374103.9
|
oxoglutarate dehydrogenase L |
|
chr10_-_49762335 Show fit | 3.58 |
ENST00000419399.4
ENST00000432695.2 |
oxoglutarate dehydrogenase L |
|
chr8_+_91249307 Show fit | 3.02 |
ENST00000309536.6
ENST00000276609.8 |
solute carrier family 26 member 7 |
|
chr12_-_10826358 Show fit | 2.91 |
ENST00000240619.2
|
taste 2 receptor member 10 |
|
chr5_-_126595237 Show fit | 2.81 |
ENST00000637206.1
ENST00000553117.5 |
aldehyde dehydrogenase 7 family member A1 |
|
chr15_+_62561361 Show fit | 2.64 |
ENST00000561311.5
|
talin 2 |
|
chr11_-_63608542 Show fit | 2.64 |
ENST00000540943.1
|
phospholipase A and acyltransferase 3 |
|
chr4_+_87975667 Show fit | 2.61 |
ENST00000237623.11
ENST00000682655.1 ENST00000508233.6 ENST00000360804.4 ENST00000395080.8 |
secreted phosphoprotein 1 |
|
chr4_-_175812236 Show fit | 2.57 |
ENST00000505375.5
|
glycoprotein M6A |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.2 | GO:0050911 | detection of chemical stimulus involved in sensory perception of smell(GO:0050911) |
0.2 | 7.3 | GO:0006099 | tricarboxylic acid cycle(GO:0006099) |
0.4 | 6.9 | GO:0070777 | D-aspartate transport(GO:0070777) D-aspartate import(GO:0070779) |
1.0 | 4.8 | GO:0090290 | positive regulation of osteoclast proliferation(GO:0090290) |
0.1 | 4.8 | GO:0051491 | positive regulation of filopodium assembly(GO:0051491) |
0.9 | 4.7 | GO:2000863 | positive regulation of estrogen secretion(GO:2000863) positive regulation of estradiol secretion(GO:2000866) |
0.1 | 4.2 | GO:0003298 | physiological muscle hypertrophy(GO:0003298) physiological cardiac muscle hypertrophy(GO:0003301) cell growth involved in cardiac muscle cell development(GO:0061049) |
0.2 | 3.8 | GO:1902358 | sulfate transmembrane transport(GO:1902358) |
0.1 | 3.7 | GO:0009312 | oligosaccharide biosynthetic process(GO:0009312) |
0.1 | 3.6 | GO:0001580 | detection of chemical stimulus involved in sensory perception of bitter taste(GO:0001580) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.5 | GO:0043209 | myelin sheath(GO:0043209) |
0.7 | 7.2 | GO:0045252 | oxoglutarate dehydrogenase complex(GO:0045252) |
0.0 | 7.2 | GO:0005759 | mitochondrial matrix(GO:0005759) |
0.0 | 6.8 | GO:0043025 | neuronal cell body(GO:0043025) |
0.0 | 6.4 | GO:0043197 | dendritic spine(GO:0043197) |
0.0 | 5.9 | GO:0030018 | Z disc(GO:0030018) |
0.0 | 5.7 | GO:0005796 | Golgi lumen(GO:0005796) |
0.1 | 4.4 | GO:0044295 | axonal growth cone(GO:0044295) |
0.1 | 4.0 | GO:0000159 | protein phosphatase type 2A complex(GO:0000159) |
0.0 | 3.7 | GO:0043204 | perikaryon(GO:0043204) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 9.6 | GO:0051015 | actin filament binding(GO:0051015) |
0.0 | 8.2 | GO:0004984 | olfactory receptor activity(GO:0004984) |
1.0 | 7.2 | GO:0004591 | oxoglutarate dehydrogenase (succinyl-transferring) activity(GO:0004591) |
0.5 | 6.9 | GO:0015501 | glutamate:sodium symporter activity(GO:0015501) |
0.0 | 6.4 | GO:0005262 | calcium channel activity(GO:0005262) |
0.1 | 4.8 | GO:0048018 | receptor agonist activity(GO:0048018) |
0.0 | 4.3 | GO:0004722 | protein serine/threonine phosphatase activity(GO:0004722) |
0.1 | 3.8 | GO:0008093 | cytoskeletal adaptor activity(GO:0008093) |
0.2 | 3.6 | GO:0019531 | oxalate transmembrane transporter activity(GO:0019531) |
0.2 | 3.6 | GO:0033038 | bitter taste receptor activity(GO:0033038) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 8.1 | PID TRKR PATHWAY | Neurotrophic factor-mediated Trk receptor signaling |
0.1 | 5.1 | PID INTEGRIN A9B1 PATHWAY | Alpha9 beta1 integrin signaling events |
0.0 | 3.2 | PID TGFBR PATHWAY | TGF-beta receptor signaling |
0.0 | 2.5 | ST INTEGRIN SIGNALING PATHWAY | Integrin Signaling Pathway |
0.0 | 2.0 | PID NCADHERIN PATHWAY | N-cadherin signaling events |
0.0 | 1.6 | SIG CHEMOTAXIS | Genes related to chemotaxis |
0.0 | 1.2 | PID CONE PATHWAY | Visual signal transduction: Cones |
0.1 | 1.0 | PID MET PATHWAY | Signaling events mediated by Hepatocyte Growth Factor Receptor (c-Met) |
0.0 | 1.0 | PID EPHA FWDPATHWAY | EPHA forward signaling |
0.0 | 0.9 | PID BARD1 PATHWAY | BARD1 signaling events |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 14.1 | REACTOME METABOLISM OF AMINO ACIDS AND DERIVATIVES | Genes involved in Metabolism of amino acids and derivatives |
0.0 | 8.0 | REACTOME OLFACTORY SIGNALING PATHWAY | Genes involved in Olfactory Signaling Pathway |
0.1 | 7.9 | REACTOME AMINO ACID AND OLIGOPEPTIDE SLC TRANSPORTERS | Genes involved in Amino acid and oligopeptide SLC transporters |
0.1 | 5.3 | REACTOME TRANSPORT OF INORGANIC CATIONS ANIONS AND AMINO ACIDS OLIGOPEPTIDES | Genes involved in Transport of inorganic cations/anions and amino acids/oligopeptides |
0.0 | 4.5 | REACTOME CLASS B 2 SECRETIN FAMILY RECEPTORS | Genes involved in Class B/2 (Secretin family receptors) |
0.0 | 4.3 | REACTOME INTEGRIN CELL SURFACE INTERACTIONS | Genes involved in Integrin cell surface interactions |
0.2 | 3.2 | REACTOME INHIBITION OF REPLICATION INITIATION OF DAMAGED DNA BY RB1 E2F1 | Genes involved in Inhibition of replication initiation of damaged DNA by RB1/E2F1 |
0.0 | 3.2 | REACTOME VOLTAGE GATED POTASSIUM CHANNELS | Genes involved in Voltage gated Potassium channels |
0.1 | 2.4 | REACTOME ABACAVIR TRANSPORT AND METABOLISM | Genes involved in Abacavir transport and metabolism |
0.0 | 2.1 | REACTOME CGMP EFFECTS | Genes involved in cGMP effects |