Illumina Body Map 2 (GSE30611)
Gene | Promoter | Pearson corr. coef. | P-value | Plot |
---|---|---|---|---|
MEOX1 | hg38_v1_chr17_-_43661563_43661672 | 0.28 | 1.3e-01 | Click! |
EVX1 | hg38_v1_chr7_+_27242796_27242807 | 0.11 | 5.6e-01 | Click! |
DLX3 | hg38_v1_chr17_-_49995210_49995230 | -0.01 | 9.6e-01 | Click! |
Promoter | Log-likelihood | Transcript | Gene | Gene Info |
---|---|---|---|---|
chr4_-_137532452 Show fit | 4.58 |
ENST00000412923.6
ENST00000511115.5 ENST00000344876.9 ENST00000507846.5 ENST00000510305.5 ENST00000611581.1 |
protocadherin 18 |
|
chr6_+_151325665 Show fit | 3.12 |
ENST00000354675.10
|
A-kinase anchoring protein 12 |
|
chr12_-_6124662 Show fit | 3.10 |
ENST00000261405.10
|
von Willebrand factor |
|
chr17_+_7407838 Show fit | 2.45 |
ENST00000302926.7
|
neuroligin 2 |
|
chr18_-_55351977 Show fit | 2.23 |
ENST00000643689.1
|
transcription factor 4 |
|
chr7_-_83649097 Show fit | 2.19 |
ENST00000643230.2
|
semaphorin 3E |
|
chr3_+_111998739 Show fit | 2.03 |
ENST00000393917.6
ENST00000273368.8 |
transgelin 3 |
|
chr1_+_202348687 Show fit | 1.91 |
ENST00000608999.6
ENST00000391959.5 ENST00000480184.5 |
protein phosphatase 1 regulatory subunit 12B |
|
chr18_-_55588184 Show fit | 1.75 |
ENST00000354452.8
ENST00000565908.6 ENST00000635822.2 |
transcription factor 4 |
|
chr5_+_172641241 Show fit | 1.71 |
ENST00000369800.6
ENST00000520919.5 ENST00000522853.5 |
neuralized E3 ubiquitin protein ligase 1B |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 6.7 | GO:0007156 | homophilic cell adhesion via plasma membrane adhesion molecules(GO:0007156) |
0.0 | 5.9 | GO:0065004 | protein-DNA complex assembly(GO:0065004) |
0.0 | 5.1 | GO:2000649 | regulation of sodium ion transmembrane transporter activity(GO:2000649) |
0.4 | 3.1 | GO:1904694 | negative regulation of vascular smooth muscle contraction(GO:1904694) |
0.3 | 3.1 | GO:0010739 | positive regulation of protein kinase A signaling(GO:0010739) |
0.1 | 2.8 | GO:0007597 | blood coagulation, intrinsic pathway(GO:0007597) |
0.1 | 2.6 | GO:0071526 | semaphorin-plexin signaling pathway(GO:0071526) |
0.3 | 2.4 | GO:1904862 | inhibitory synapse assembly(GO:1904862) |
0.1 | 2.3 | GO:0048935 | peripheral nervous system neuron differentiation(GO:0048934) peripheral nervous system neuron development(GO:0048935) |
0.3 | 1.7 | GO:0070086 | ubiquitin-dependent endocytosis(GO:0070086) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.6 | GO:0032993 | protein-DNA complex(GO:0032993) |
0.0 | 4.6 | GO:0043209 | myelin sheath(GO:0043209) |
0.0 | 4.2 | GO:0032420 | stereocilium(GO:0032420) |
0.2 | 3.7 | GO:0033093 | Weibel-Palade body(GO:0033093) |
0.1 | 2.4 | GO:0060077 | inhibitory synapse(GO:0060077) |
0.0 | 1.6 | GO:0032154 | cleavage furrow(GO:0032154) cell surface furrow(GO:0097610) |
0.0 | 1.6 | GO:0005811 | lipid particle(GO:0005811) |
0.0 | 1.5 | GO:0031092 | platelet alpha granule membrane(GO:0031092) |
0.0 | 1.4 | GO:0032839 | dendrite cytoplasm(GO:0032839) |
0.0 | 1.1 | GO:0032391 | photoreceptor connecting cilium(GO:0032391) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.2 | 5.8 | GO:0001087 | transcription factor activity, sequence-specific DNA binding, RNA polymerase recruiting(GO:0001011) transcription factor activity, TFIIB-class binding(GO:0001087) |
0.1 | 5.2 | GO:0017080 | sodium channel regulator activity(GO:0017080) |
0.0 | 5.2 | GO:0051015 | actin filament binding(GO:0051015) |
0.0 | 3.4 | GO:0048365 | Rac GTPase binding(GO:0048365) |
0.1 | 3.1 | GO:0030215 | semaphorin receptor binding(GO:0030215) |
0.1 | 3.1 | GO:0019865 | immunoglobulin binding(GO:0019865) |
0.1 | 2.4 | GO:0042043 | neurexin family protein binding(GO:0042043) |
0.0 | 2.1 | GO:0042056 | chemoattractant activity(GO:0042056) |
0.1 | 2.0 | GO:0008179 | adenylate cyclase binding(GO:0008179) |
0.0 | 2.0 | GO:0030676 | Rac guanyl-nucleotide exchange factor activity(GO:0030676) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 5.9 | PID AR PATHWAY | Coregulation of Androgen receptor activity |
0.0 | 4.3 | NABA ECM GLYCOPROTEINS | Genes encoding structural ECM glycoproteins |
0.0 | 4.2 | PID PDGFRB PATHWAY | PDGFR-beta signaling pathway |
0.0 | 2.4 | PID P38 MK2 PATHWAY | p38 signaling mediated by MAPKAP kinases |
0.0 | 1.5 | PID ARF6 DOWNSTREAM PATHWAY | Arf6 downstream pathway |
0.0 | 1.4 | PID AP1 PATHWAY | AP-1 transcription factor network |
0.0 | 1.3 | ST WNT BETA CATENIN PATHWAY | Wnt/beta-catenin Pathway |
0.0 | 1.2 | PID AURORA B PATHWAY | Aurora B signaling |
0.0 | 1.1 | PID TCPTP PATHWAY | Signaling events mediated by TCPTP |
0.0 | 1.0 | PID KIT PATHWAY | Signaling events mediated by Stem cell factor receptor (c-Kit) |
Log-likelihood per target | Total log-likelihood | Term | Description |
---|---|---|---|
0.0 | 4.1 | REACTOME MYOGENESIS | Genes involved in Myogenesis |
0.1 | 3.8 | REACTOME OTHER SEMAPHORIN INTERACTIONS | Genes involved in Other semaphorin interactions |
0.0 | 3.2 | REACTOME FACTORS INVOLVED IN MEGAKARYOCYTE DEVELOPMENT AND PLATELET PRODUCTION | Genes involved in Factors involved in megakaryocyte development and platelet production |
0.1 | 3.1 | REACTOME PLATELET ADHESION TO EXPOSED COLLAGEN | Genes involved in Platelet Adhesion to exposed collagen |
0.0 | 2.8 | REACTOME TRANSCRIPTIONAL REGULATION OF WHITE ADIPOCYTE DIFFERENTIATION | Genes involved in Transcriptional Regulation of White Adipocyte Differentiation |
0.0 | 2.1 | REACTOME SMOOTH MUSCLE CONTRACTION | Genes involved in Smooth Muscle Contraction |
0.0 | 1.5 | REACTOME NRAGE SIGNALS DEATH THROUGH JNK | Genes involved in NRAGE signals death through JNK |
0.0 | 1.4 | REACTOME HORMONE SENSITIVE LIPASE HSL MEDIATED TRIACYLGLYCEROL HYDROLYSIS | Genes involved in Hormone-sensitive lipase (HSL)-mediated triacylglycerol hydrolysis |
0.1 | 1.1 | REACTOME REGULATION OF RHEB GTPASE ACTIVITY BY AMPK | Genes involved in Regulation of Rheb GTPase activity by AMPK |
0.0 | 1.1 | REACTOME IL 7 SIGNALING | Genes involved in Interleukin-7 signaling |